Gene

KWMTBOMO03198

Pre Gene Modal

BGIBMGA013573

Annotation

PREDICTED:_cadherin-87A_[Bombyx_mori]

Location

Bomo_Chr6(+):1280633-1296116      View in EpiBrowser

Full name

Cadherin-87A      

Location in the cell

Cytoplasmic   Reliability : 2.23

CDS

ATGAGTTGTACGGAGGTCGCCGCGGTGCGTGCCACAGACTTGGATACAGGGATAAACGCTGAGATCAAATATGCCATACAGAAGGGAGCACTGGACGCTTTTGCCATTGACAATGTCACCGGGGTAGTGACGGTCGCGTCCGGCCTGGACTACGACAAGAGGAACACATACACGATCCAGATCACCGCCACTGATCTCGGCGTACCGAGCTTGACCGGGACCACTGAGCTGCTGGTGCACGTCGTGAACGTTAACGACAAGAAGCCGCAGTTCGCGCCGCCCGTGCAGAGGGCGGAGGTGTCAGCGGACGCGGGCCCCGGCGCAAGGGTGCACGACCTGACGGCATTCGACCCCGAGATCGAGGACGTCGACCGCCTCCTCTACGAACTGGCCGCCGACAGAATGATCAAGGCAGTCGATAAAAACGGTAAAGAGGTATCTGAAGAAGGAATATTCGATCAATGGATGTCAGTATTACCGAACGGCACAGTGGTGGTGGCACAGAAGCTGGACCGGTCCAGGGCGGCCGTGCTCAGCCTCCCAGTCAGGGTCACGGATACTTCTGCTCCCGCGTTACAACAAGCTGACGGGGAATTAATAATAACCATAGTGGATGTAAATCGTTACGCTCCGGTGTTCTCCCAGCCGTCGTATTTGCAAAGCATGGTGGAGGAGCAGCCCGTGGGCACAGTGCTCGAGACGTTCACGGCTACCGATCGTGAAACTCCAATTTCTGCGATCATCATCCACCCACCGAACCCGTATTTCGAAATCGACAATCGTACAGGGCTAGTGAAGACGACCCAGAGGATAGACTACGAGAAGGTCCACAGCATTAACTTCACGCTGATAGCGTTCGACTCGGGGGTGCCGCAGCTGACCACCACGGCCGGCGTCACCGTGGAGATACTTAACGCCAACGACGAAGACCCACTGTTCGACACAGAGGGATACGAAGCTAAAGTTCTGGAACATTCTGAGGCTGGTACCGAAGTCGTGACAGTTCACGCCTCCGATAAAGATGAGGGTGAGTACGGTGAAGTCCGGTACAGCCTCTCCGGTGACATGTCTCTGTTCACCATCGATCCGATATCGGGGGTGGTGACCATTGCTCCCGGCGCCGACATCGACCGCGAAGCCGTCACCGAGATATGGATGAGGGCGGTAGCATCTGACAACGCCCCTCAGCATCTGAAGAGAAGTACCAGTGTACCGTTGCACGTGAAAGTGCTGGACATAAATGATCATGCGCCGGTCTTCAGTCAGAAAGTGTACAAGAGTACAATCGCGGAGAATCTGCAGCTGGACCCTCCAGCCGCCATACTCCAGGTCATAGCCGAGGACAAGGACGAGGGAGTCAACGGGAAAGTGGAGTTTAAGATCATTGAACAGAGCGAACCGGGCACGTTCACGGTGGACCCTGTGAGTGGTATCATCTACCCAGCGAGAGCGGTGGAGGGCAACCGGACCTACCAGCTGGTGGTGCGCGGCGCGGACGGCGCGGGGCCCGCCGCCCTCAGCGACACGGCGCGCGTGGACATCACCGTGCGGAGCCTCAACACGCACGCACCGCTGTTCGTGCAGCCCCCGCCCGGCCAGAGCACCATTGAGATACCAGAGAACGCAGCACAAGCAGATTTCCTAATAACGACAATCAAAGCTACGGACGATGACAGCGGAGAAAACGGACGAATCTCCTACTACCTGAAGGTTGACAATCAGAACGTTGGCGAAACCGAAGAGTTCAGTCTGGACCGGGACACCGGTGAACTCAGGACTAAGACGTTCCTCGACCGTGAAGAAGTCCCTGAATATCAGCTGGCGATAGCGGCTGTCGACAACGGGAGCCCGGCGCAGTTCGAGACTCTTCGACTCCTGACCGTCGTGCTGGCTGACGAGGACGACAACACTCCTGAGTTCTCGCAACGCAGCTACGTGTTCAACATCAAGGAGAACCTGCCTCCTAACACCATTATCGGTGGGCTGTGA

Protein

MSCTEVAAVRATDLDTGINAEIKYAIQKGALDAFAIDNVTGVVTVASGLDYDKRNTYTIQITATDLGVPSLTGTTELLVHVVNVNDKKPQFAPPVQRAEVSADAGPGARVHDLTAFDPEIEDVDRLLYELAADRMIKAVDKNGKEVSEEGIFDQWMSVLPNGTVVVAQKLDRSRAAVLSLPVRVTDTSAPALQQADGELIITIVDVNRYAPVFSQPSYLQSMVEEQPVGTVLETFTATDRETPISAIIIHPPNPYFEIDNRTGLVKTTQRIDYEKVHSINFTLIAFDSGVPQLTTTAGVTVEILNANDEDPLFDTEGYEAKVLEHSEAGTEVVTVHASDKDEGEYGEVRYSLSGDMSLFTIDPISGVVTIAPGADIDREAVTEIWMRAVASDNAPQHLKRSTSVPLHVKVLDINDHAPVFSQKVYKSTIAENLQLDPPAAILQVIAEDKDEGVNGKVEFKIIEQSEPGTFTVDPVSGIIYPARAVEGNRTYQLVVRGADGAGPAALSDTARVDITVRSLNTHAPLFVQPPPGQSTIEIPENAAQADFLITTIKATDDDSGENGRISYYLKVDNQNVGETEEFSLDRDTGELRTKTFLDREEVPEYQLAIAAVDNGSPAQFETLRLLTVVLADEDDNTPEFSQRSYVFNIKENLPPNTIIGGL

Description

Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells (By similarity).

Keywords

Calcium   Cell adhesion   Cell membrane   Complete proteome   Glycoprotein   Membrane   Metal-binding   Reference proteome   Repeat   Signal   Transmembrane   Transmembrane helix  

Feature

chain  Cadherin-87A

Uniprot

H9JVL0   A0A2H1WSY0   A0A2H1VJV4   A0A212EXY9   A0A2J7R340   A0A067R2V0   + More
K7J527   A0A232FF41   B0W917   A0A026WZF8   A0A3L8DTJ8   E9IS39   F4X0T8   A0A151XGS7   A0A151I3A9   A0A2M4BA98   A0A151I809   A0A2A3E7T2   A0A087ZWQ8   A0A182J7N1   A0A195DUL5   A0A154PK18   E2BG92   A0A182VG69   A0A2L1IQ80   A0A182QKL0   Q7QAQ8   A0A1S4GIJ5   A0A182KXI7   A0A1Y9GKC3   D6WC50   A0A0J7NR78   A0A0C9RKC3   E2AGF4   A0A182Y7D4   N6UP29   A0A1B6JL50   A0A0L7RI16   A0A194Q1R2   A0A1B6G2W1   A0A0N0U6S0   A0A1B6L3B2   A0A0A1XME3   A0A0K8SZ40   U4UPW6   A0A1I8MKU2   A0A1I8MKU6   A0A1I8MKU3   A0A1I8MKX7   T1I8I2   A0A0A9X2T8   A0A1B0FHA7   A0A0A9XXM0   A0A1A9ZYV1   N6SYU5   B3MTU1   A0A0P8XDJ2   E0W2T6   A0A034VUR3   A0A0L0CE80   A0A1J1HU01   A0A0Q9WWP4   A0A1W4W1A8   B4HHK1   A0A2C9H8D3   B4QTJ8   B4PTE6   Q9VGG5   A0A1I8NRZ8   A0A1I8NS02   A0A2P8Z823   A0A1B0B9U7   B4LXZ1   A0A2W1BD34   A0A0M4EQ25   A0A336M3D8   B4K9Z6   B4JG13   A0A3B0JN51   A0A336KIV3   B5DVW9   A0A1Y1MCH0   B4GMB1   A0A1A9WEW2   A0A1A9YHW0   A0A147BFY1   A0A1A9VG57   E9GS84   A0A195EXJ7   A0A2P2IBR9   B3P4D8   A0A0K2TYX2   A0A0P5H1A4   A0A0N0PBZ6   A0A162Q1Q2   A0A0P5BUI2   A0A0P5QRJ7   A0A0N8BR82   A0A0P6DN37  

Pubmed

19121390    22118469    24845553    20075255    28648823    24508170    + More
30249741    21282665    21719571    20798317    29415259    12364791    20966253    18362917    19820115    25244985    23537049    26354079    25830018    25315136    25401762    17994087    18057021    20566863    25348373    26108605    17550304    10731132    12537572    12537569    17893096    29403074    28756777    15632085    28004739    29652888    21292972   

EMBL

BABH01032472    BABH01032473    BABH01032474    BABH01032475    BABH01032476    BABH01032477    + More
BABH01032478    ODYU01010794    SOQ56117.1    ODYU01002963    SOQ41129.1    AGBW02011640    OWR46355.1    NEVH01007822    PNF35261.1    KK852798    KDR16370.1    AAZX01000351    AAZX01011029    AAZX01011337    AAZX01011398    NNAY01000333    OXU29140.1    DS231861    EDS39455.1    KK107054    EZA61427.1    QOIP01000004    RLU23483.1    GL765283    EFZ16609.1    GL888502    EGI59930.1    KQ982138    KYQ59612.1    KQ976512    KYM82427.1    GGFJ01000818    MBW49959.1    KQ978415    KYM94087.1    KZ288354    PBC27276.1    KQ980390    KYN16244.1    KQ434942    KZC12192.1    GL448116    EFN85300.1    MF741659    AVD96942.1    AXCN02000136    AXCN02000137    AAAB01008888    EAA08909.4    APCN01005528    KQ971316    EEZ99177.2    LBMM01002334    KMQ94965.1    GBYB01013722    JAG83489.1    GL439310    EFN67487.1    APGK01002377    APGK01002378    KB734758    ENN83510.1    GECU01007748    JAS99958.1    KQ414588    KOC70438.1    KQ459579    KPI99517.1    GECZ01012991    JAS56778.1    KQ435729    KOX77608.1    GEBQ01021841    JAT18136.1    GBXI01001793    JAD12499.1    GBRD01007360    JAG58461.1    KB632314    ERL92186.1    ACPB03019929    GBHO01029300    JAG14304.1    CCAG010019049    GBHO01018935    JAG24669.1    APGK01051728    APGK01051729    APGK01051730    APGK01051731    KB741202    ENN72944.1    CH902623    EDV30222.1    KPU72743.1    KPU72744.1    KPU72742.1    DS235879    EEB19942.1    GAKP01013694    JAC45258.1    JRES01000630    KNC29789.1    CVRI01000021    CRK91477.1    CH964272    KRG00181.1    CH480815    EDW42540.1    CM000364    EDX13303.1    CM000160    EDW97645.1    KRK03874.1    KRK03875.1    AE014297    AY128505    PYGN01000154    PSN52632.1    JXJN01010593    CH940650    EDW66857.2    KRF82945.1    KZ150255    PZC71795.1    CP012526    ALC46335.1    UFQS01000496    UFQT01000496    SSX04398.1    SSX24762.1    CH933806    EDW15644.2    KRG01652.1    CH916369    EDV92552.1    OUUW01000008    SPP83644.1    SSX04399.1    SSX24763.1    CM000070    EDY68473.1    GEZM01034916    JAV83532.1    CH479185    EDW37985.1    GEGO01005726    JAR89678.1    GL732561    EFX77715.1    KQ981928    KYN32871.1    IACF01005876    LAB71459.1    CH954181    EDV49453.1    HACA01013210    CDW30571.1    GDIQ01234022    JAK17703.1    KQ460757    KPJ12580.1    LRGB01000389    KZS19323.1    GDIP01180308    JAJ43094.1    GDIQ01117417    JAL34309.1    GDIQ01152803    JAK98922.1    GDIQ01074978    JAN19759.1   

Proteomes

UP000005204    UP000007151    UP000235965    UP000027135    UP000002358    UP000215335    + More
UP000002320    UP000053097    UP000279307    UP000007755    UP000075809    UP000078540    UP000078542    UP000242457    UP000005203    UP000075880    UP000078492    UP000076502    UP000008237    UP000075903    UP000075886    UP000007062    UP000075882    UP000075840    UP000007266    UP000036403    UP000000311    UP000076408    UP000019118    UP000053825    UP000053268    UP000053105    UP000030742    UP000095301    UP000015103    UP000092444    UP000092445    UP000007801    UP000009046    UP000037069    UP000183832    UP000007798    UP000192221    UP000001292    UP000076407    UP000000304    UP000002282    UP000000803    UP000095300    UP000245037    UP000092460    UP000008792    UP000092553    UP000009192    UP000001070    UP000268350    UP000001819    UP000008744    UP000091820    UP000092443    UP000078200    UP000000305    UP000078541    UP000008711    UP000053240    UP000076858   

PRIDE

H9JVL0    Q9VGG5   

Pfam

PF00028   Cadherin        + More
PF01395   PBP_GOBP

Interpro

IPR015919   Cadherin-like_sf        + More
IPR020894   Cadherin_CS       
IPR002126   Cadherin-like_dom       
IPR020683   Ankyrin_rpt-contain_dom       
IPR036770   Ankyrin_rpt-contain_sf       
IPR002110   Ankyrin_rpt       
IPR006170   PBP/GOBP       
IPR036728   PBP_GOBP_sf       

SUPFAM

SSF49313   SSF49313        + More
SSF48403   SSF48403       
SSF47565   SSF47565       

Gene 3D

1.25.40.20     1.10.238.20    

CDD

cd00204  ANK

ProteinModelPortal

H9JVL0   A0A2H1WSY0   A0A2H1VJV4   A0A212EXY9   A0A2J7R340   A0A067R2V0   + More
K7J527   A0A232FF41   B0W917   A0A026WZF8   A0A3L8DTJ8   E9IS39   F4X0T8   A0A151XGS7   A0A151I3A9   A0A2M4BA98   A0A151I809   A0A2A3E7T2   A0A087ZWQ8   A0A182J7N1   A0A195DUL5   A0A154PK18   E2BG92   A0A182VG69   A0A2L1IQ80   A0A182QKL0   Q7QAQ8   A0A1S4GIJ5   A0A182KXI7   A0A1Y9GKC3   D6WC50   A0A0J7NR78   A0A0C9RKC3   E2AGF4   A0A182Y7D4   N6UP29   A0A1B6JL50   A0A0L7RI16   A0A194Q1R2   A0A1B6G2W1   A0A0N0U6S0   A0A1B6L3B2   A0A0A1XME3   A0A0K8SZ40   U4UPW6   A0A1I8MKU2   A0A1I8MKU6   A0A1I8MKU3   A0A1I8MKX7   T1I8I2   A0A0A9X2T8   A0A1B0FHA7   A0A0A9XXM0   A0A1A9ZYV1   N6SYU5   B3MTU1   A0A0P8XDJ2   E0W2T6   A0A034VUR3   A0A0L0CE80   A0A1J1HU01   A0A0Q9WWP4   A0A1W4W1A8   B4HHK1   A0A2C9H8D3   B4QTJ8   B4PTE6   Q9VGG5   A0A1I8NRZ8   A0A1I8NS02   A0A2P8Z823   A0A1B0B9U7   B4LXZ1   A0A2W1BD34   A0A0M4EQ25   A0A336M3D8   B4K9Z6   B4JG13   A0A3B0JN51   A0A336KIV3   B5DVW9   A0A1Y1MCH0   B4GMB1   A0A1A9WEW2   A0A1A9YHW0   A0A147BFY1   A0A1A9VG57   E9GS84   A0A195EXJ7   A0A2P2IBR9   B3P4D8   A0A0K2TYX2   A0A0P5H1A4   A0A0N0PBZ6   A0A162Q1Q2   A0A0P5BUI2   A0A0P5QRJ7   A0A0N8BR82   A0A0P6DN37  

PDB

6E6B     E-value=8.08356e-45,     Score=457

KEGG

101746185    no KO assigned | (RefSeq) cadherin-87A

GO

GO:0007156   GO:0005886   GO:0005509   GO:0016021   GO:0007155   GO:0005887   GO:0050839   GO:0098609   GO:0044331   GO:0016339   GO:0005549   GO:0016020   GO:0005515   GO:0045211   GO:0006281   GO:0048384  

Subcellular location

Cell membrane  

Length:

662

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0487100000000001

Exp number, first 60 AAs:

0.03251

Total prob of N-in:

0.00304

outside

1  -  662

 

 

Pi

215.098937

Theta

145.38744

Tajima's D

2.315594

CLR

0.603114

CSRT

0.922353882305885

Interpretation

Uncertain