Gene

KWMTBOMO03197

Pre Gene Modal

BGIBMGA013573

Annotation

PREDICTED:_cadherin-87A_[Bombyx_mori]

Location

Bomo_Chr6(+):1261543-1278964      View in EpiBrowser

Full name

Cadherin-87A      

Location in the cell

Cytoplasmic   Reliability : 1.275 Nuclear   Reliability : 1.539

CDS

ATGGAAACAAGATGGAGAACGTTCGTGATATTATCGTTCTGCTTGGGTTCAAGCTTAGCAAACATGTTACCGGTGTTCACGCAAGACATGAACAACTTACCGCTATCGGAGAGTACTCCGGTTGGCACAGTGGTCTACACACTGCAGGGAGTTCACCCTCAGGGGTTACCGATCAAATACAGCATGGTCGGCTCTGACAATTTCGTTGTAGATCCTGAGTCCGGCGATGTCACGCTGGACAAGCCTTTGGACAGGGAGGTTGACGATACGCTGAAGTTCCTCGTTTCCATTGAAGCTGCCGACCCTCAGGGTCAGCAGAAGCTGATACAGAAACAGCCCGTCACAGTCATAGTGCTAGATGAAAATGATAACCCGCCTACATTCAAAAACAACCCTTACGAAGTAGACGTGCCAGAAGACGAAGCAATAGGAACGACCATCCTCAACAACATACTGGTGGAAGATAAAGATTTTGTCGGCGATAATCTTGAAGTTGGATGTTCGGCCAATGACCAGTGGCCTGAAGCTTGCGATATCTTTGACGTAGTGGCTTTAAACTCGACTTCGCACCACTACCACGGAGCTCTGGTCCTGAAGAGGCCCCTCAATTACAACGAAAGGCAGTTCTATCAGTTTCAATTGTCTGCCACAGACGGCATTCAGAACTCCTCCGGACAAGTAGAAGTGAAGGTGATAGACGTCCAGAATTCGAGTCCCATGTTCTACGGAGCTCTCAGCGGAGCGCTGTCGGAGGACGCGCCGGTCGGCACCCTGGTGCTGACGGTGCAGGCCAGGGACGCTGACAAGGCTCAACCCAGGCCTGTCGTCTTGGAGCTGCTCACTAATCCTCTGGATTTCTTTCTGTTGGACAAAAACACTGGAGAACTACGGACAGCTAAGCCGCTAGATAGAGAAGCTTTAGACGATCCGTCCTCGCCACTAAATTTAACCGTCAGGGCAACCGAAATAGTGAATGGCTCACCGTTGATATCGGATTTGACGTCGACCGTCGCGACGGTGACCATCACCATTAAGGACGTGAACGACGAACCGCCCCGCTTCAACCGAAGGGAGTACGCCGTTCAGATACCGGAGAGTCTACCGGTCGGGACGCCGCTGCCCAACTTAGAGATGGTCGTCACCGACACTGATTTGGGTCTCAATTCGGTGTTCGGTTTGCGTTTACTGAATGAGTTCGAAGCGTTCGTCGTGGAGCCCCCGTCGGCAACCGGCAGCGCCTCCGTCACCATACGACTCAACTCCAGCTTGGACTACGAGGACCCGAACCAGAGGAAGTTCATTTTGGAGGTGATAGCAGAAGAGCTGCACACGACCCCGAAGCTGTCGTCACGGGCCAGCGTGACGGTGACAGTGACAGACGTCAATGACAATGCGCCGCAATTCGCGGAGGAGCCCGTGGTGCGGTCCTTATCGGAGACTTCGCCCCCCGGCACCCGCCTCATTGCCTCGCGTGCCACTGACCGGGACACGGGAAGGTTCGGTACTGAAGGTATTGTGTATGAGCTCTCCGGTAACGGGGCGGAGCTGTTTGACGTCGACAAGAGATCTGGTGTGATCAGCGTCGCGGAATGCCCTACTCCTGGACAACCCCCGTGCCTGGACTACGAGAGCAGAAAGGACTATTTCCTGCAATATAAGGCGACTGATGATTACGGCAACGGTCAAATGACGGTGGTCTCGCTTCAGATATCATTGATTGATGCGAACGACAATGCCCCAGTATTTGTGACGCCGGTATACAAGGCGTCCATTGACGAAGACGCTGTCAAATTCGAACCAGAACTACAGGTTCTAGCCCGCGATGTCGACGTGTCATCAGACATACGCTACTCTATCGTGGGTCCGGCGACGCATCCGTTCTGGATCGATCCAGTCACCGGGAAGATCACAGTCAACCCTGAGTCCGGGAGAGTGGCAGCGGTGGATGACTCCAACAAGATAATACTCACTGTATTGACGGAGGAGTATGAAATTTTCCACACTTATAGAGAATATAGAGAAGAAGTGCACAATGATAATATTTTTTTAAAATAA

Protein

METRWRTFVILSFCLGSSLANMLPVFTQDMNNLPLSESTPVGTVVYTLQGVHPQGLPIKYSMVGSDNFVVDPESGDVTLDKPLDREVDDTLKFLVSIEAADPQGQQKLIQKQPVTVIVLDENDNPPTFKNNPYEVDVPEDEAIGTTILNNILVEDKDFVGDNLEVGCSANDQWPEACDIFDVVALNSTSHHYHGALVLKRPLNYNERQFYQFQLSATDGIQNSSGQVEVKVIDVQNSSPMFYGALSGALSEDAPVGTLVLTVQARDADKAQPRPVVLELLTNPLDFFLLDKNTGELRTAKPLDREALDDPSSPLNLTVRATEIVNGSPLISDLTSTVATVTITIKDVNDEPPRFNRREYAVQIPESLPVGTPLPNLEMVVTDTDLGLNSVFGLRLLNEFEAFVVEPPSATGSASVTIRLNSSLDYEDPNQRKFILEVIAEELHTTPKLSSRASVTVTVTDVNDNAPQFAEEPVVRSLSETSPPGTRLIASRATDRDTGRFGTEGIVYELSGNGAELFDVDKRSGVISVAECPTPGQPPCLDYESRKDYFLQYKATDDYGNGQMTVVSLQISLIDANDNAPVFVTPVYKASIDEDAVKFEPELQVLARDVDVSSDIRYSIVGPATHPFWIDPVTGKITVNPESGRVAAVDDSNKIILTVLTEEYEIFHTYREYREEVHNDNIFLK

Description

Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells (By similarity).

Keywords

Calcium   Cell adhesion   Cell membrane   Complete proteome   Glycoprotein   Membrane   Metal-binding   Reference proteome   Repeat   Signal   Transmembrane   Transmembrane helix  

Feature

chain  Cadherin-87A

Uniprot

H9JVL0   A0A2H1VJV4   A0A194Q1R2   A0A212EXY9   A0A0N0PBZ6   A0A1B6L3B2   + More
A0A1B6G2W1   A0A1B6BWB3   A0A3L8DTJ8   A0A2L1IQ80   A0A0N0U6S0   A0A158P1K1   A0A067R2V0   A0A0C9RKC3   A0A2A3E7T2   A0A087ZWQ8   A0A151I809   A0A146KXI2   A0A0A9X5Z0   A0A151XGS7   A0A232FF41   T1I8I2   D6WC50   A0A0T6B338   E0W2T6   A0A195DUL5   A0A0J7NR78   E2AGF4   A0A151I3A9   A0A2R7VSP5   A0A1B6JL50   A0A2J7R340   A0A2P6L2Z9   A0A087UQR6   A0A2P8Z823   U4UPW6   A0A1Y1MCH0   A0A0L0CE80   E2BG92   A0A1I8MKU2   A0A1I8MKX7   A0A1I8MKU6   A0A1I8MKU3   A0A147BFY1   A0A0K8U123   W8BEQ1   A0A2S2Q7P4   A0A1I8NS02   A0A1I8NRZ8   A0A2H8TK70   A0A0L7RI16   A0A336M3D8   X1WQ77   A0A2S2NVT6   A0A1S4GIJ5   A0A0K8VZZ4   A0A0K8UJS3   A0A1Y9GKC3   A0A2C9H8D3   B3MTU1   A0A0P8XDJ2   A0A182KXI7   Q7QAQ8   A0A1W4W1A8   B4JG13   B5DVW9   Q9VGG5   A0A0Q9WWP4   B4LXZ1   A0A3B0JN51   B4K9Z6   B4QTJ8   A0A0M4EQ25   A0A1J1HU01   B4HHK1   B0W917   B4PTE6   B3P4D8   A0A154PK18   A0A1A9VG57   A0A1B0FHA7   A0A1A9YHW0   N6SYU5   A0A2W1BD34   A0A1A9ZYV1   A0A1A9WEW2   A0A195EXJ7   A0A1B0B9U7   A0A0K2TYX2   A0A1D2MQG8  

Pubmed

19121390    26354079    22118469    30249741    29415259    21347285    + More
24845553    26823975    25401762    28648823    18362917    19820115    20566863    20798317    29403074    23537049    28004739    26108605    25315136    29652888    24495485    12364791    17994087    18057021    20966253    15632085    10731132    12537572    12537569    17893096    17550304    28756777    27289101   

EMBL

BABH01032472    BABH01032473    BABH01032474    BABH01032475    BABH01032476    BABH01032477    + More
BABH01032478    ODYU01002963    SOQ41129.1    KQ459579    KPI99517.1    AGBW02011640    OWR46355.1    KQ460757    KPJ12580.1    GEBQ01021841    JAT18136.1    GECZ01012991    JAS56778.1    GEDC01031725    JAS05573.1    QOIP01000004    RLU23483.1    MF741659    AVD96942.1    KQ435729    KOX77608.1    ADTU01006385    ADTU01006386    ADTU01006387    ADTU01006388    KK852798    KDR16370.1    GBYB01013722    JAG83489.1    KZ288354    PBC27276.1    KQ978415    KYM94087.1    GDHC01018882    JAP99746.1    GBHO01029376    JAG14228.1    KQ982138    KYQ59612.1    NNAY01000333    OXU29140.1    ACPB03019929    KQ971316    EEZ99177.2    LJIG01016077    KRT81684.1    DS235879    EEB19942.1    KQ980390    KYN16244.1    LBMM01002334    KMQ94965.1    GL439310    EFN67487.1    KQ976512    KYM82427.1    KK854063    PTY10524.1    GECU01007748    JAS99958.1    NEVH01007822    PNF35261.1    MWRG01002194    PRD32960.1    KK121082    KFM79705.1    PYGN01000154    PSN52632.1    KB632314    ERL92186.1    GEZM01034916    JAV83532.1    JRES01000630    KNC29789.1    GL448116    EFN85300.1    GEGO01005726    JAR89678.1    GDHF01031875    JAI20439.1    GAMC01014864    JAB91691.1    GGMS01004553    MBY73756.1    GFXV01002247    MBW14052.1    KQ414588    KOC70438.1    UFQS01000496    UFQT01000496    SSX04398.1    SSX24762.1    ABLF02020103    GGMR01008489    MBY21108.1    AAAB01008888    GDHF01026882    GDHF01007905    JAI25432.1    JAI44409.1    GDHF01025714    JAI26600.1    APCN01005528    CH902623    EDV30222.1    KPU72743.1    KPU72744.1    KPU72742.1    EAA08909.4    CH916369    EDV92552.1    CM000070    EDY68473.1    AE014297    AY128505    CH964272    KRG00181.1    CH940650    EDW66857.2    KRF82945.1    OUUW01000008    SPP83644.1    CH933806    EDW15644.2    KRG01652.1    CM000364    EDX13303.1    CP012526    ALC46335.1    CVRI01000021    CRK91477.1    CH480815    EDW42540.1    DS231861    EDS39455.1    CM000160    EDW97645.1    KRK03874.1    KRK03875.1    CH954181    EDV49453.1    KQ434942    KZC12192.1    CCAG010019049    APGK01051728    APGK01051729    APGK01051730    APGK01051731    KB741202    ENN72944.1    KZ150255    PZC71795.1    KQ981928    KYN32871.1    JXJN01010593    HACA01013210    CDW30571.1    LJIJ01000716    ODM95064.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000053240    UP000279307    UP000053105    + More
UP000005205    UP000027135    UP000242457    UP000005203    UP000078542    UP000075809    UP000215335    UP000015103    UP000007266    UP000009046    UP000078492    UP000036403    UP000000311    UP000078540    UP000235965    UP000054359    UP000245037    UP000030742    UP000037069    UP000008237    UP000095301    UP000095300    UP000053825    UP000007819    UP000075840    UP000076407    UP000007801    UP000075882    UP000007062    UP000192221    UP000001070    UP000001819    UP000000803    UP000007798    UP000008792    UP000268350    UP000009192    UP000000304    UP000092553    UP000183832    UP000001292    UP000002320    UP000002282    UP000008711    UP000076502    UP000078200    UP000092444    UP000092443    UP000019118    UP000092445    UP000091820    UP000078541    UP000092460    UP000094527   

PRIDE

H9JVL0    Q9VGG5   

Pfam

PF00028   Cadherin

Interpro

IPR015919   Cadherin-like_sf        + More
IPR020894   Cadherin_CS       
IPR002126   Cadherin-like_dom       

SUPFAM

SSF49313   SSF49313       

ProteinModelPortal

H9JVL0   A0A2H1VJV4   A0A194Q1R2   A0A212EXY9   A0A0N0PBZ6   A0A1B6L3B2   + More
A0A1B6G2W1   A0A1B6BWB3   A0A3L8DTJ8   A0A2L1IQ80   A0A0N0U6S0   A0A158P1K1   A0A067R2V0   A0A0C9RKC3   A0A2A3E7T2   A0A087ZWQ8   A0A151I809   A0A146KXI2   A0A0A9X5Z0   A0A151XGS7   A0A232FF41   T1I8I2   D6WC50   A0A0T6B338   E0W2T6   A0A195DUL5   A0A0J7NR78   E2AGF4   A0A151I3A9   A0A2R7VSP5   A0A1B6JL50   A0A2J7R340   A0A2P6L2Z9   A0A087UQR6   A0A2P8Z823   U4UPW6   A0A1Y1MCH0   A0A0L0CE80   E2BG92   A0A1I8MKU2   A0A1I8MKX7   A0A1I8MKU6   A0A1I8MKU3   A0A147BFY1   A0A0K8U123   W8BEQ1   A0A2S2Q7P4   A0A1I8NS02   A0A1I8NRZ8   A0A2H8TK70   A0A0L7RI16   A0A336M3D8   X1WQ77   A0A2S2NVT6   A0A1S4GIJ5   A0A0K8VZZ4   A0A0K8UJS3   A0A1Y9GKC3   A0A2C9H8D3   B3MTU1   A0A0P8XDJ2   A0A182KXI7   Q7QAQ8   A0A1W4W1A8   B4JG13   B5DVW9   Q9VGG5   A0A0Q9WWP4   B4LXZ1   A0A3B0JN51   B4K9Z6   B4QTJ8   A0A0M4EQ25   A0A1J1HU01   B4HHK1   B0W917   B4PTE6   B3P4D8   A0A154PK18   A0A1A9VG57   A0A1B0FHA7   A0A1A9YHW0   N6SYU5   A0A2W1BD34   A0A1A9ZYV1   A0A1A9WEW2   A0A195EXJ7   A0A1B0B9U7   A0A0K2TYX2   A0A1D2MQG8  

PDB

5W4T     E-value=1.0776e-23,     Score=275

KEGG

101746185    no KO assigned | (RefSeq) cadherin-87A

GO

GO:0007156   GO:0005886   GO:0005509   GO:0016021   GO:0050839   GO:0098609   GO:0007155   GO:0005887   GO:0044331   GO:0016339   GO:0016020   GO:0005515   GO:0045211   GO:0006281   GO:0048384  

Subcellular location

Cell membrane  

SignalP

Position:   1 - 20,         Likelihood:  0.968525

 

 

Length:

684

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

17.71915

Exp number, first 60 AAs:

17.71892

Total prob of N-in:

0.86535

POSSIBLE N-term signal

sequence

inside

1  -  6

TMhelix

7  -  26

outside

27  -  684

 

 

Pi

327.845572

Theta

183.852188

Tajima's D

2.430907

CLR

0.418029

CSRT

0.937453127343633

Interpretation

Uncertain