SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03187
Annotation
hypothetical_protein_M513_10814?_partial_[Trichuris_suis]
Location in the cell
Cytoplasmic   Reliability : 1.538 Nuclear   Reliability : 1.957
 

Sequence

CDS
ATGGCCAGTCAAGAAATACAGGAACAACTGCAACAACTCTTGGCTGCAAATGCAGCGCTACAAAAACAACTTGAAGGAAATGAGAGAGAAACAAAAGTTTGTAGAGTTACAGTCAAATTGCCTACATTTTGGGCTGACAAACCAGCTGTTTGGTTTGCTCAAATTGAAGCTCAATTCCAAATTGCCAATATTGTGACAGATACTACTAAATATAATTATGTTGTAGGTCACCTTGACCAAAGAATAGCTGGAGAGGTTGAAGACATAATAACAAACCCACCAACTGAAGAAAAATATGAAAAATTAAAAAGCATACTTATTCAGCGCCTTTCTGTATCACAAGAAAAAAGAGTTCGACAACTTCTGAGTGATGAAGAACTTGGGGATAGAAAACCATCACAGTTCCTCCGACACCTACGCTCTCTTGCAGGAAGCACACTCACAGACGACAATATTATACGCCAACTTTGGTTACGCCGCTTGCCTCATCAGGCTCAAGCTATACTGGCAGCACAGGCTGACCTTGGCCTTGACAAATTGTCAGAACTAGCCGACAAAATTCTTGAGTTGGCCCAAACTCCTCCTATGCCGGCTTTCATAGATCACATTGATGATGAACGGAAGCAAGCCGAGCCTTTGTCTTGTCAGCAAAATCAAGCCTTACGACCAATGGATCTGGAAAATCCGCCGCTGTTGCCGCTGCCAACAAGGCCGCTGTCAATTCCAATAAAAATTCAAGGGCTCTCAACTGGCGTATCTTTCTCCGTGGGGGTGTGGTGTGGTGAATGGTTTTTCACACACAGATTAACAACGGGAGACGTCCGGAAGAAAAGAAAGACAGGCTGTCAGATTGAGGGAAAAATGTCATGA
Protein
MASQEIQEQLQQLLAANAALQKQLEGNERETKVCRVTVKLPTFWADKPAVWFAQIEAQFQIANIVTDTTKYNYVVGHLDQRIAGEVEDIITNPPTEEKYEKLKSILIQRLSVSQEKRVRQLLSDEELGDRKPSQFLRHLRSLAGSTLTDDNIIRQLWLRRLPHQAQAILAAQADLGLDKLSELADKILELAQTPPMPAFIDHIDDERKQAEPLSCQQNQALRPMDLENPPLLPLPTRPLSIPIKIQGLSTGVSFSVGVWCGEWFFTHRLTTGDVRKKRKTGCQIEGKMS

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
289
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.09361
Exp number, first 60 AAs:
0.00043
Total prob of N-in:
0.03018
outside
1  -  289
 
 

Population Genetic Test Statistics

Pi
188.331589
Theta
17.091762
Tajima's D
0.225563
CLR
23.087839
CSRT
0.44032798360082
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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