SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03179
Pre Gene Modal
BGIBMGA013460
Annotation
hypothetical_protein_KGM_13986_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 1.972
 

Sequence

CDS
ATGCTTCCGATAGATCTTTTAGAAAAGGAGCGGACTTGTAGCGTGTCGGAGGGAGAGAGGAACTTCCACGTGCTTTACCAGCTGCTGGCCGGCGCCGACGTACATTTGCTCAAGCGTCTCCGGCTGCAACGTTCGTGGGAGCACTACCGCGTGCTGCGGGGCGAAGCGCTGGACGCCGCCCTCTCCCCGCGCCGCTCTCCCGCCCCGCCCCGCGCTGCGCCCCCCGAACATGCGCGGGACAACGAACACTTCGCATTTACTAAGGCGGCCATGGCGTCCCTGGGGTTCAGCGGGGTGGAGTGCGGCGCCGTGCTGCGGGTGCTCGCCTTCGTGCTGAAGTTGGGCAACGTGCAGTTCGAGCCGCAGCACAACATCGACGGCTCCATCGGCGTGCGCCTCGAGCAGCAGTACGAATTGGTAGAAGCGTGTGCGCTAGTTGGGGTGGAGGCAGCAGAGCTCGCCGCAGCTCTGGGCGCCCCCCCACTGTCGCACCGGGATCCTGATGCTGTAACTCGACTTGTCTCGAGCCCGCTGCACCCCCCCCCACAAGAAGAAGAAATGGCAAGAAGTGAAGATGTAGAGGACAGCGTTGAGGGGGAGGAGGACGGCGAGGGCAGCGCGGAGTGGGCGTCGGCGCTGCGGGACCGCCTGCTGTGCGCGCTGTACTCGCGACTCTTCACCTGGCTCATCAACTCCGTCAACGAGGCCATCAAGCCGGCAGCGGCGGGCAAGCGGTGCTCGCTGGGCATCCTGGACGTGTACGGGTTCGAGCGGCTGGCGCGCAACGGGCTGGAGCGCCTGCTCATCAACTACGCGGCCGAGCGCGTGCAGGCCGCCGTCACCGGCGCCACGCTGCGCCGCGAGCAGGACGACTACGCGCGCGAGGGCCTGCCCTGGCGCCCCCTGCGCTACGCCGACCACGAGGCGCACGCCGACCTGCTGGACGCCGGGCCCGACTCGCTGCTGGCCGCGCTCCGGGACGCCAGGACCGACGCCGCCTTCCTGCAGCGCCTGCAGCGGCGGCGACACCCGCGCCTGCTGCCTGACCCACCTGACCGCTTCCAGGTGGTGCACTTCGGTGGCGCCGTGACGTACTGCGCCCGCGGCATCGTGGACAAGAACCGCGACGCCGTGTCCGCCCGGCTCAGCGCCGTGCTGGGGGCCGCCCGGGAGCCGCTCCTGGCCGCGCTGTTCGCGGGCCGGGAGTCCCCGCGCCGCGTGTGCGCGCTGGCCTGCAGGCAGAGGGCGCTGGTGGCCGCGCTGGTCCGCAGGCTGGGGCCCGCGCCGCGGCTCGTGCGCTGTCTGCGGCCCGACGCGGGGCTCCGCCCTCACCGCTGGGACGCGCCGCTGCTCAGGCACCAGCTGCGCTCGCAGGGCATCCTCGACATGGCGCTGCTGCGTCGCGCGGGCTGGTGCGAGTCCATGTGCGCGCGCGCGCTGGTGGCGCGGTACGGCGTGCTGCAGGGGGCGCGGGGGGGCCCCTCGGCGAGCGCGTCCCCCCGCGCCTCGCCCGCCCCCCGCGACTGCCCGCTGCGGGCGGCGCGCGCGCTGCTGCGGTCCCTGCCCATCCCGAGCGCGGAGTTCGCGTACGGACGGACGAAAGTTTTCATTCGTAGTCCCCGGACGGTTTGGGAATTGGAAGCGTTACGTAGCGCTCGCGTGGAGCAGCTGGTGGTGCGACTGCAGCGAGCCTGGCGCCGACACCGCGCCGCACGCCGCGCCGTCGTGCGGCACGCAGCGCAGCGGGTCATCGCGCGCGCGTGGAGAGCGCATAAGAAGCGGCGACGATTGCTGAGTAGGGACACGCAGTCACCGGCCGCCGTCAAGATCTGGCGCTGGTGGTGCCGAGCAGCCCGGCGTCGCTACTTGAGCAGGCTGTGGCGCCGCCTCCCCGAGCGGCACCTGTCCCCCGCGTGCGTGTCCTGGCCCGCCTGCCCGCAGCCCCGCCTGCTGGCGCGCGCGGACGCCCTGCTGCGCCGCATACACCACGCGTGGCGCTGCCGCCTTTACCGCGCTGCCTTCGACCAGACCGCCCGGAACCGGATGCGGGAAAAGGTCACCGCCAGCGTCCTCTTCAAGGATCGGAAGGCGAACTACAGCCGGAGCGTGGGGCATCCGTTTGTGGGGGACTACGTGAGGCTGCGGGCCTCGGCGGAGTGGAGACGGGGCGCGACCGCCACGGACCGGTACGTGGTGTTCGCGGACGTGGTGGGGAAGGTGGCGCGGGGCAGCGGGCGGGTGGCGCGCTGCCTGGCGGTGCTGTCCACGGCCGCGCTGCTGCTGCTGGAGCCGCGCTCCCTCCGCCTCAAGAGACGAGTGCCCGCCCACAGCGTCTACAGACTGTCGCTGTCGCCCTACGACGACGACTTGCTGGTAGTCCACGTCCGAGCCTGCGGAGGCGCCGAGAGCTCCACTGAGGAGTTGTCGCAGTGCTCCTCGCGCGACGCTCCCGACGCCCCCGGCTGCCTATTTGCGGGCGAGGGCGCGTGGCGGCGGCGTGGCGACGTGGTGGTGCGGACGTGCCACGTGCTGGAGCTGGCCACCAAACTGTTCCTCGTGGTGCAGAACGCCGTGGGAGCGCCGCCCCATGTAAATATCGCGCCAGAGTTCGAAGCAAACTTCGGTGGGCAACTAGTCACGGTATCCTTCCACGCGCTGGGCGAGGGGGGGGCTCGGCTGGCGCGGAGGGGGGACAGGCTGGACGTGCTGCTCTGA
Protein
MLPIDLLEKERTCSVSEGERNFHVLYQLLAGADVHLLKRLRLQRSWEHYRVLRGEALDAALSPRRSPAPPRAAPPEHARDNEHFAFTKAAMASLGFSGVECGAVLRVLAFVLKLGNVQFEPQHNIDGSIGVRLEQQYELVEACALVGVEAAELAAALGAPPLSHRDPDAVTRLVSSPLHPPPQEEEMARSEDVEDSVEGEEDGEGSAEWASALRDRLLCALYSRLFTWLINSVNEAIKPAAAGKRCSLGILDVYGFERLARNGLERLLINYAAERVQAAVTGATLRREQDDYAREGLPWRPLRYADHEAHADLLDAGPDSLLAALRDARTDAAFLQRLQRRRHPRLLPDPPDRFQVVHFGGAVTYCARGIVDKNRDAVSARLSAVLGAAREPLLAALFAGRESPRRVCALACRQRALVAALVRRLGPAPRLVRCLRPDAGLRPHRWDAPLLRHQLRSQGILDMALLRRAGWCESMCARALVARYGVLQGARGGPSASASPRASPAPRDCPLRAARALLRSLPIPSAEFAYGRTKVFIRSPRTVWELEALRSARVEQLVVRLQRAWRRHRAARRAVVRHAAQRVIARAWRAHKKRRRLLSRDTQSPAAVKIWRWWCRAARRRYLSRLWRRLPERHLSPACVSWPACPQPRLLARADALLRRIHHAWRCRLYRAAFDQTARNRMREKVTASVLFKDRKANYSRSVGHPFVGDYVRLRASAEWRRGATATDRYVVFADVVGKVARGSGRVARCLAVLSTAALLLLEPRSLRLKRRVPAHSVYRLSLSPYDDDLLVVHVRACGGAESSTEELSQCSSRDAPDAPGCLFAGEGAWRRRGDVVVRTCHVLELATKLFLVVQNAVGAPPHVNIAPEFEANFGGQLVTVSFHALGEGGARLARRGDRLDVLL

Summary

Uniprot
ProteinModelPortal
PDB
6C1H     E-value=8.23388e-34,     Score=363

Ontologies

Topology

Length:
904
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.14207
Exp number, first 60 AAs:
0.00192
Total prob of N-in:
0.00369
outside
1  -  904
 
 

Population Genetic Test Statistics

Pi
27.439031
Theta
47.944355
Tajima's D
-1.425993
CLR
17.62322
CSRT
0.0665966701664917
Interpretation
Uncertain
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