Gene

KWMTBOMO03155

Pre Gene Modal

BGIBMGA013438

Annotation

PREDICTED:_scavenger_receptor_class_B_member_1-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr6(+):414333-426097      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.211

CDS

ATGAGTTCGATATTCAAGGTTTCTCCGCCTCAAGAGGGCATCAAGAGAAGGCTTCTTCTCGCACTCTCTTTAGGAGCATTCCTTTTAATTTCATCCATTGCGCTGATCCTCACAGATCCCATGTGGGCCATCGCCAAATACAAATTTCGTCTTGCCAATGGAAGTATACTCCATGAGCTCTTGTCATCGGAGATGGAAGGTGGAAGGTTCGCGGTGTACCTGTTCAACATAACTAACCCTGACCGGTTCCTATCGGGCGAAGACCCATACCTTAAACTTGACGAAGTGGGTCCGTTTACTTATTTAGAATACCGAACTCACTCTGAGCTGCAGTTCGATAGGGAAGCCGGAGTAATGAGGTACACTCCGCGGATGCGATCTGTGTTTGTTCCTGAAGAATCTATCGGGAACCCTGAAGACATTTTCCTCACCATGCCCAATATACCAATGCTAAGCGCAACAACAATGATCCGATCATCGCCCGTCTTCATTCGTAATATCTACAACATAGTCGCCCGCCAATACGGATCCCAGCCCATCGTGAAATTGGCCGCCAGTAAATACTTGTGGGGCTACAAGGATCCTGTCCTGACCTTCGCTAACAGCTTGGTGCCTGGTCTCATATATTTTAACACTACTGGAATTATGGATAGATTGTATGATAAGAACGTACACTATCGCATGGAATTGGGAACTAATGATGATGATAAATTCAAGATTAAGAGAATACATAAATATACTCGACTCCACCCTGAGTCTGAAGTTTTTGATGAAAGTATACTAACTTTCAACGACACCTATGAAGGCATGGCATACCCACCGATGATTGGCAAGAACACACCAATCAACATCTTTAGATTAGGCATCTGCAAGTCCTTCGAGATGGAATACCACGGCAATAAGACGTCGGAATACGGCCCGAATGCTTTCGTGTACAAATTTAATGAGAAGATGTTCGAGAACAATCTTTGCGATGTTAAGGGGGCTTGCCCTAAAGGCGTCATGGATTTGTCAGCTTGCTTTTATGGTTTGCCCATGGGATTATCAAAGGGGCATTTATTGGATGCTGATCCAAAACTGTTCGATCGCATCAAGGGCTTGAAGCCAGATCCCGAAAAACATTCTAGTCACTTAGTCATAGAACCGAAAATTGGATTGACTCTAGAAACGTCATGGTCACTACAAGCAAACATCTTTGTTGGAGATATCACATACAACGCTGAAGCTAAGATGTTTTCCAATATGATCCTTCCTATAGCACATTTCAAGATTAAACAACCTCACCTGCCGTCAATAGCTATCACAGCGCTGCGTATGATGTATATAACGGTTCCAAAAGCGCTCTTCATTACCGAAATACTTCTGATGCTCTCTTGTTTGCTGCTCTTAGTCTACTCAGCGTGGTTGCTGCACTGGAAACGAGTTCACAAAAAACAGCCACTGTCAGAGAAAGAACTGCAGATATCCAGCCGAATGGCCAATGAGCCTTTGATGAGTTATTTGACGATAAATTAA

Protein

MSSIFKVSPPQEGIKRRLLLALSLGAFLLISSIALILTDPMWAIAKYKFRLANGSILHELLSSEMEGGRFAVYLFNITNPDRFLSGEDPYLKLDEVGPFTYLEYRTHSELQFDREAGVMRYTPRMRSVFVPEESIGNPEDIFLTMPNIPMLSATTMIRSSPVFIRNIYNIVARQYGSQPIVKLAASKYLWGYKDPVLTFANSLVPGLIYFNTTGIMDRLYDKNVHYRMELGTNDDDKFKIKRIHKYTRLHPESEVFDESILTFNDTYEGMAYPPMIGKNTPINIFRLGICKSFEMEYHGNKTSEYGPNAFVYKFNEKMFENNLCDVKGACPKGVMDLSACFYGLPMGLSKGHLLDADPKLFDRIKGLKPDPEKHSSHLVIEPKIGLTLETSWSLQANIFVGDITYNAEAKMFSNMILPIAHFKIKQPHLPSIAITALRMMYITVPKALFITEILLMLSCLLLLVYSAWLLHWKRVHKKQPLSEKELQISSRMANEPLMSYLTIN

Similarity

Belongs to the CD36 family.

Uniprot

K7ZLU1   K7ZRZ1   K7ZQ90   K7ZLU0   A0A2A4JTS4   K7ZN68   + More
A0A2W1BT84   H9JV74   A0A2A4JT04   A0A2H1V8Y8   A0A2W1BRR6   H9JV76   A0A2H1V7C0   A0A194Q1W4   A0A212FCS4   A0A0L7KUM6   A0A0N0PEN1   A0A194Q3D1   E0VPT8   A0A139WG73   A0A336L8K1   A0A2H8TL09   A0A336LYF7   J9KAS8   A0A2W1BDC0   A0A1Y1KDW8   A0A1Y1KDR6   A0A1B6J672   A0A2S2QNL3   A0A0K8WGU0   A0A034VI50   A0A1B6IUH7   A0A139WFW1   H9JVK9   E2AWE0   A0A0N0U3K8   A0A0A1XC80   E2BXL2   A0A0A9ZCG5   A0A0M8ZY30   A0A0A9YDQ1   A0A1B6M9G3   N6TZF9   A0A1B6LBY0   A0A1B6MVM3   T1HPT0   A0A026X1F9   A0A023F2D4   A0A0L7QQ97   A0A2J7PNU5   E0W134   A0A1I8N7C1   A0A1I8N7B3   A0A1I8N7B6   A0A195E3W4   A0A232EZ92   W5JE70   A0A0L0BYA6   A0A195EDX3   A0A195FWI4   A0A2S2Q087   A0A0L7QWT1   A0A1L8DJL5   T1PIR5   A0A1L8DJK2   A0A1L8DJY4   A0A154PGJ9   K7IRA8   A0A182M5B4   A0A088AKK6   A0A182VZS1   A0A2A3EJ06   A0A310SMC7   A0A1I8PIT2   A0A1I8PIM0   A0A1D6T3G5   A0A182LE16   N6T293   A0A1I8PIY2   F4X1X1   A0A026VWL9   Q7QCP3   A0A182NQI5   A0A067QYX6   A0A182PUF4   A0A182VLS1   A0A182XAB2   A0A182HS57   A0A194RQ90   A0A195FW92   A0A3L8DH31   A0A195AZH7   A0A194QN82   A0A1I8NTR6   A0A158NHD6   A0A1B6E1D3   A0A195AV35  

Pubmed

23160179    28756777    19121390    26354079    22118469    26227816    + More
20566863    18362917    19820115    28004739    25348373    20798317    25830018    25401762    26823975    23537049    24508170    30249741    25474469    25315136    28648823    20920257    23761445    26108605    20075255    20966253    21719571    12364791    24845553    21347285   

EMBL

AB742541    BAM67018.1    AB742538    BAM67017.1    AB742535    BAM67014.1    + More
AB742534    BAM67013.1    NWSH01000627    PCG75176.1    AB742536    AB742537    BAM67015.1    BAM67016.1    KZ149979    PZC75846.1    BABH01037379    BABH01037380    BABH01037381    PCG75175.1    ODYU01001113    SOQ36872.1    PZC75847.1    BABH01037377    BABH01037378    ODYU01000809    SOQ36154.1    KQ459579    KPI99536.1    AGBW02009155    OWR51508.1    JTDY01005621    KOB66820.1    KQ459753    KPJ20156.1    KPI99519.1    DS235379    EEB15394.1    KQ971348    KYB26889.1    UFQS01002145    UFQT01002145    SSX13321.1    SSX32757.1    GFXV01003022    MBW14827.1    UFQT01000186    SSX21297.1    ABLF02039108    KZ150255    PZC71794.1    GEZM01086194    JAV59682.1    GEZM01086193    JAV59683.1    GECU01013046    JAS94660.1    GGMS01010060    MBY79263.1    GDHF01001943    JAI50371.1    GAKP01016788    JAC42164.1    GECU01017125    JAS90581.1    KYB26888.1    BABH01032481    BABH01032482    BABH01032483    GL443286    EFN62240.1    KQ435878    KOX69994.1    GBXI01005740    JAD08552.1    GL451265    EFN79581.1    GBHO01040299    GBHO01037707    GBHO01002028    GBHO01002023    GDHC01001230    JAG03305.1    JAG05897.1    JAG41576.1    JAG41581.1    JAQ17399.1    KQ435827    KOX71919.1    GBHO01040302    GBHO01040300    GBHO01030701    GBHO01014371    GBRD01014176    JAG03302.1    JAG03304.1    JAG12903.1    JAG29233.1    JAG51650.1    GEBQ01007404    JAT32573.1    APGK01055245    KB741261    KB632413    ENN71632.1    ERL95261.1    GEBQ01018790    JAT21187.1    GEBQ01000026    JAT39951.1    ACPB03008273    KK107031    QOIP01000008    EZA62097.1    RLU19322.1    GBBI01003543    JAC15169.1    KQ414792    KOC60729.1    NEVH01023284    PNF18020.1    DS235866    EEB19340.1    KQ979685    KYN19838.1    NNAY01001554    OXU23617.1    ADMH02001643    ETN61638.1    JRES01001160    KNC24951.1    KQ979039    KYN23425.1    KQ981208    KYN44808.1    GGMS01001943    MBY71146.1    KQ414706    KOC63072.1    GFDF01007426    JAV06658.1    KA647995    AFP62624.1    GFDF01007425    JAV06659.1    GFDF01007424    JAV06660.1    KQ434889    KZC10300.1    AXCM01006435    KZ288248    PBC31169.1    KQ762196    OAD56141.1    APCN01000243    ENN71633.1    ERL95262.1    GL888555    EGI59558.1    KK107672    EZA48178.1    AAAB01008859    EAA07765.4    KK853094    KDR11500.1    KQ459875    KPJ19657.1    KYN44713.1    RLU19750.1    KQ976694    KYM77643.1    KQ461194    KPJ06983.1    ADTU01015617    ADTU01015618    ADTU01015619    ADTU01015620    GEDC01005560    JAS31738.1    KQ976738    KYM75834.1   

Proteomes

UP000218220    UP000005204    UP000053268    UP000007151    UP000037510    UP000053240    + More
UP000009046    UP000007266    UP000007819    UP000000311    UP000053105    UP000008237    UP000019118    UP000030742    UP000015103    UP000053097    UP000279307    UP000053825    UP000235965    UP000095301    UP000078492    UP000215335    UP000000673    UP000037069    UP000078541    UP000076502    UP000002358    UP000075883    UP000005203    UP000075920    UP000242457    UP000095300    UP000075840    UP000075882    UP000007755    UP000007062    UP000075884    UP000027135    UP000075885    UP000075903    UP000076407    UP000078540    UP000005205   

PRIDE

K7ZLU1    K7ZRZ1    K7ZQ90    K7ZLU0    K7ZN68    H9JV74    + More
H9JV76    H9JVK9   

Pfam

PF01130   CD36        + More
PF04843   Herpes_teg_N
PF00069   Pkinase
PF05148   Methyltransf_8

Interpro

IPR002159   CD36_fam        + More
IPR000415   Nitroreductase-like       
IPR005428   CD36/SCARB1/SNMP1       
IPR006928   Herpes_teg_USP       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR017441   Protein_kinase_ATP_BS       
IPR000719   Prot_kinase_dom       
IPR029063   SAM-dependent_MTases       
IPR007823   RRP8       

SUPFAM

SSF55469   SSF55469        + More
SSF56112   SSF56112       
SSF53335   SSF53335       

Gene 3D

3.40.109.10    

ProteinModelPortal

K7ZLU1   K7ZRZ1   K7ZQ90   K7ZLU0   A0A2A4JTS4   K7ZN68   + More
A0A2W1BT84   H9JV74   A0A2A4JT04   A0A2H1V8Y8   A0A2W1BRR6   H9JV76   A0A2H1V7C0   A0A194Q1W4   A0A212FCS4   A0A0L7KUM6   A0A0N0PEN1   A0A194Q3D1   E0VPT8   A0A139WG73   A0A336L8K1   A0A2H8TL09   A0A336LYF7   J9KAS8   A0A2W1BDC0   A0A1Y1KDW8   A0A1Y1KDR6   A0A1B6J672   A0A2S2QNL3   A0A0K8WGU0   A0A034VI50   A0A1B6IUH7   A0A139WFW1   H9JVK9   E2AWE0   A0A0N0U3K8   A0A0A1XC80   E2BXL2   A0A0A9ZCG5   A0A0M8ZY30   A0A0A9YDQ1   A0A1B6M9G3   N6TZF9   A0A1B6LBY0   A0A1B6MVM3   T1HPT0   A0A026X1F9   A0A023F2D4   A0A0L7QQ97   A0A2J7PNU5   E0W134   A0A1I8N7C1   A0A1I8N7B3   A0A1I8N7B6   A0A195E3W4   A0A232EZ92   W5JE70   A0A0L0BYA6   A0A195EDX3   A0A195FWI4   A0A2S2Q087   A0A0L7QWT1   A0A1L8DJL5   T1PIR5   A0A1L8DJK2   A0A1L8DJY4   A0A154PGJ9   K7IRA8   A0A182M5B4   A0A088AKK6   A0A182VZS1   A0A2A3EJ06   A0A310SMC7   A0A1I8PIT2   A0A1I8PIM0   A0A1D6T3G5   A0A182LE16   N6T293   A0A1I8PIY2   F4X1X1   A0A026VWL9   Q7QCP3   A0A182NQI5   A0A067QYX6   A0A182PUF4   A0A182VLS1   A0A182XAB2   A0A182HS57   A0A194RQ90   A0A195FW92   A0A3L8DH31   A0A195AZH7   A0A194QN82   A0A1I8NTR6   A0A158NHD6   A0A1B6E1D3   A0A195AV35  

PDB

6I2K     E-value=1.98981e-31,     Score=340

KEGG

101743641    no KO assigned | (RefSeq) SCRB15; lysosome membrane protein 2-like

GO

GO:0016021   GO:0016491   GO:0004672   GO:0005524   GO:0005730   GO:0008168   GO:0016020   GO:0003755   GO:0006457   GO:0006355   GO:0007179   GO:0005515   GO:0045211   GO:0006281   GO:0048384  

PANTHER

PTHR11923  

Length:

504

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

45.80084

Exp number, first 60 AAs:

22.39288

Total prob of N-in:

0.98499

POSSIBLE N-term signal

sequence

inside

1  -  19

TMhelix

20  -  42

outside

43  -  446

TMhelix

447  -  469

inside

470  -  504

 

 

Pi

200.560774

Theta

167.816124

Tajima's D

0.814059

CLR

0

CSRT

0.60361981900905

Interpretation

Possibly Positive selection