SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03151
Pre Gene Modal
BGIBMGA013434
Annotation
PREDICTED:_putative_transporter_ZK637.1_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.562
 

Sequence

CDS
ATGGTGCTTCAATCGGCTTACGATAACGAAGGTTTCCACAACAATGAACCTTGCGGTTATGATAATGAGGCCGCGAAGACTCATACATTTGATGAGGCTATAGAATTAGCAGGTAATGGCCGCTACAACATAATTCTTCTAGCCACCATGAGTACGGCCATCATAGCCATGGGCTTGGACATGTTTGGCTTCTCCGTTATTGTTACAGGAGCCTCTTGCGACTTCCAGTTGGACCACGCTCAAAAGAGCATCCTTCTGTCCATGCCGTTTGGGGGTTCGATCATCATGGCGTATCCATGGGGGTATATATCGGACACTCAGGGTCGAAGAAAAAGTTTGTTGATAGCCTTGTCGATCAGCTACGTAGTGTCTACCTTGAGTGCCTTCTCACCTCACTGGATAGTATTAGCTGTTTTACGTTTTATCAGCACCAGCTTTTGTAGCTGTGCGCAGTCAGCAACGTATACGTTACTCGGTGAATCATGCTCGGTGAGAGTAAAGGGTGCTTTCTTACTGATCATGACAAGTGTTCTGAATTTTGGTTTCGCGACATATATGCTGATAGCATACGGAATCCTAAATCAAAAATTCTCATATGACCTTGGTCTTCTGACTTTCATACCGTGGCGTCTTCTGACCATCGTACTGGCTTTGCCCCTCGGGATCAGCGCTATATCTCTGTTCTTTTTGTGCGAAAGCCCAAAGTTCCTCTTGAATAGTAACAAAGAGGGTCAGGCTTTGGAAGTGATCAAGAGAATTTGGGAGATTAATCGACAAGACGGTTTGTTTCCGGTCAAGAAACTAGTGCTGAACGAGGAGGGCAACGTGAGTTCTAAGGATGTGCCGTTCCTAAGAAGCAACGCGTTCTACGTCTGGTACCCCTTCTTAGTTGACAGTATCATCGGGAACTTGGCTTCCCCGAATATCACTGGCCCAGCTGGGCTGTGCGAAATGATTAGTTTCATCAGTAGCAGCAGTGCAGCCGGTAGCGAAACTTCACAGATTGCATGTGTAACTGGGGTAGATTCAACGACCGTGCTGGGGGCGCTGGTCAGCGGTGTCTTCACCGTGGCCGTCAACTTGGCCATTTCAAAGTTGTCTTCTAGGAAGAAGACTTTGTCTATCAGTATATTCCTAATATCCGGCTTGGTGGGGGCCGCCACGACAACCGTCACCAATAATATTGTGGCGTTCATACTGTTCTTCGGCTTGGCATTCGTGGGTCTTGGAATTGGTGTAGTGTTTTCATATTATGTGGACTTGTATCCCACTTCTTACCGGGGCATGGCAGCCTGTCTTGGTGTGATGGTAGCCAGGCTGAGTGGCTTGGGAGGAATCAATCTCATCGGCGCCTATATCACAACGAATTGTGAGACAACGTTCTACGTGTGCAGTGCTTACATGCTAAGTGGCGCTTTGGTGTCTATGTCACTGCCGGCCGACCGAATTAAAAAATAA
Protein
MVLQSAYDNEGFHNNEPCGYDNEAAKTHTFDEAIELAGNGRYNIILLATMSTAIIAMGLDMFGFSVIVTGASCDFQLDHAQKSILLSMPFGGSIIMAYPWGYISDTQGRRKSLLIALSISYVVSTLSAFSPHWIVLAVLRFISTSFCSCAQSATYTLLGESCSVRVKGAFLLIMTSVLNFGFATYMLIAYGILNQKFSYDLGLLTFIPWRLLTIVLALPLGISAISLFFLCESPKFLLNSNKEGQALEVIKRIWEINRQDGLFPVKKLVLNEEGNVSSKDVPFLRSNAFYVWYPFLVDSIIGNLASPNITGPAGLCEMISFISSSSAAGSETSQIACVTGVDSTTVLGALVSGVFTVAVNLAISKLSSRKKTLSISIFLISGLVGAATTTVTNNIVAFILFFGLAFVGLGIGVVFSYYVDLYPTSYRGMAACLGVMVARLSGLGGINLIGAYITTNCETTFYVCSAYMLSGALVSMSLPADRIKK

Summary

EMBL
ODYU01004504    SOQ44451.1    NWSH01002380    PCG68429.1    BABH01037389    JTDY01000209    + More
KOB78282.1    ODYU01009141    SOQ53353.1    KZ150202    PZC72277.1    SOQ44452.1    KZ149979    PZC75843.1    JTDY01006887    KOB65616.1    ODYU01000151    SOQ34432.1    KQ459579    KPI99535.1    PCG68430.1    KPI99511.1    KPI99493.1    KZ149911    PZC78141.1    PZC78134.1    AGBW02010212    OWR48924.1    ODYU01008516    SOQ52184.1    KPI99506.1    KQ460542    KPJ14129.1    KPI99507.1    AGBW02011638    OWR46364.1    ODYU01011202    SOQ56787.1    BABH01032396    BABH01032397    BABH01032398    BABH01032399    JTDY01010086    KOB61253.1    ODYU01011059    SOQ56557.1    AGBW02013272    OWR43679.1    NWSH01000659    PCG74966.1    BABH01032418    BABH01032419    BABH01032420    BABH01032421    BABH01032422    BABH01032423    SOQ34435.1    NWSH01000457    PCG76268.1    KPI99491.1    BABH01032458    PZC78136.1    ODYU01006861    SOQ49086.1    SOQ49085.1    KQ459603    KPI92884.1    AGBW02011653    OWR46341.1    KQ461194    KPJ06946.1    NWSH01001089    PCG72687.1    PCG72686.1    GFDG01001242    JAV17557.1    KA646499    AFP61128.1    GFDG01001241    JAV17558.1    GFDG01001245    JAV17554.1    ODYU01012071    SOQ58176.1    CH477251    EAT46035.1    NWSH01000098    PCG79585.1    KPJ14127.1    JRES01001303    KNC23749.1    KPJ14131.1    AGBW02011241    OWR46942.1    KPI92885.1    ODYU01004537    SOQ44529.1    BABH01032453    KPJ06947.1    PCG72684.1    PCG72682.1    AGBW02011531    OWR46513.1    GAMC01013311    JAB93244.1    GAMC01013310    JAB93245.1    KPJ06948.1    ODYU01012422    SOQ58716.1    ODYU01012108    SOQ58229.1    GBXI01008289    JAD06003.1    DS232039    EDS32804.1    KPJ14146.1    AY380837    AAQ88394.1    JXUM01069579    KQ562558    KXJ75630.1    PZC78135.1    GAMC01012743    JAB93812.1    DS232812    EDS25866.1    JXUM01021492    KQ560602    KXJ81676.1    GANO01004365    JAB55506.1    CH478136    EAT33842.1    GAMC01009766    JAB96789.1    GAKP01015980    JAC42972.1    GGFL01003986    MBW68164.1    AAAB01008952    EGK97241.1   
Pfam
PF07690   MFS_1        + More
PF00083   Sugar_tr
Interpro
IPR011701   MFS        + More
IPR020846   MFS_dom       
IPR036259   MFS_trans_sf       
IPR005828   MFS_sugar_transport-like       
SUPFAM
SSF103473   SSF103473       
PDB
4PYP     E-value=3.9469e-06,     Score=122

Ontologies

Topology

Length:
485
Number of predicted TMHs:
10
Exp number of AAs in TMHs:
231.94982
Exp number, first 60 AAs:
15.98907
Total prob of N-in:
0.75486
POSSIBLE N-term signal
sequence
inside
1  -  45
TMhelix
46  -  68
outside
69  -  82
TMhelix
83  -  102
inside
103  -  113
TMhelix
114  -  136
outside
137  -  170
TMhelix
171  -  193
inside
194  -  205
TMhelix
206  -  228
outside
229  -  343
TMhelix
344  -  366
inside
367  -  372
TMhelix
373  -  392
outside
393  -  396
TMhelix
397  -  419
inside
420  -  431
TMhelix
432  -  454
outside
455  -  458
TMhelix
459  -  478
inside
479  -  485
 
 

Population Genetic Test Statistics

Pi
21.019139
Theta
23.963469
Tajima's D
0.835676
CLR
1.320818
CSRT
0.614969251537423
Interpretation
Uncertain
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