SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03149
Annotation
PREDICTED:_immunoglobulin_superfamily_DCC_subclass_member_4-like_[Plutella_xylostella]
Location in the cell
Extracellular   Reliability : 1.623 Nuclear   Reliability : 2.216
 

Sequence

CDS
ATGAATTTTCCTCAACAGCTAACGGACTTAGACCCAAATGTAGAGACGTACTTAGTGGTTGCTGCCCCTGGAACGGACCAGAAATCAAAAGTTGTGACCATTCCGCCGCACCCGTCTGACTACTCCACACTCTACCTGGGGCTGGGCATAGTGGGAGGCGTGCTGCTGCTTCTCGTGCTCGCGGTGGCTGCTATCTGCATCTGGAGGCACAGGAAGAGGTTCCTGACCCCTGACCGCCCTCGTCGAAGAAACGTTTCAACAACTGACGGCCAGGGCGAGAGCTGCGAGTTACAGGTATATGTACTTAATGATCGCGCAGTGAGGGAGCGGCTCGCCAACGGCGTCAAGGACGCCGGGGAGCCCCTGCTCAACGGCACCGTCCACATCACAGAGAACCCTTCGTCGAAGAGGCCGAACGGGCGCGCGCGCAGGGGAGAGCGCCGGTACGAGGTGGCGTTCGACTTGTCGCGGCACGAGGAGAGCGCGGCGCCGCCCCCCGACCCCCGCCCCCCACGCACACCCCCTACGACCTGTCGCGCGGCTACAACAAGCTGCCCGACGACAACATGA
Protein
MNFPQQLTDLDPNVETYLVVAAPGTDQKSKVVTIPPHPSDYSTLYLGLGIVGGVLLLLVLAVAAICIWRHRKRFLTPDRPRRRNVSTTDGQGESCELQVYVLNDRAVRERLANGVKDAGEPLLNGTVHITENPSSKRPNGRARRGERRYEVAFDLSRHEESAAPPPDPRPPRTPPTTCRAATTSCPTTT

Summary

Pfam
PF00047   ig        + More
PF07679   I-set
PF00041   fn3
PF00160   Pro_isomerase
Interpro
IPR013106   Ig_V-set        + More
IPR003598   Ig_sub2       
IPR036179   Ig-like_dom_sf       
IPR003961   FN3_dom       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR013783   Ig-like_fold       
IPR013151   Immunoglobulin       
IPR036116   FN3_sf       
IPR013098   Ig_I-set       
IPR029000   Cyclophilin-like_dom_sf       
IPR002130   Cyclophilin-type_PPIase_dom       
SUPFAM
SSF48726   SSF48726        + More
SSF49265   SSF49265       
SSF50891   SSF50891       
Gene 3D

Ontologies

Topology

Length:
189
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.8472
Exp number, first 60 AAs:
16.36567
Total prob of N-in:
0.00916
POSSIBLE N-term signal
sequence
outside
1  -  45
TMhelix
46  -  68
inside
69  -  189
 
 

Population Genetic Test Statistics

Pi
239.875653
Theta
187.450575
Tajima's D
0.304116
CLR
0.005048
CSRT
0.451877406129694
Interpretation
Uncertain
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