Silkworm Genome Informatics Database

Gene

KWMTBOMO03147 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013430

Annotation

PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_G_[Bombyx_mori]

Location

Bomo_Chr6(+):140483-153521 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.428

CDS

ATGACGGTAGACGGTGAGGATAAGAAACCGAGAGATCGTGTGTTCATGGATATTTCGATCGGCGGTATGCCATCCGGTCGAATAGTGTTCGAGCTGTTCAATGAGGTGGCTCCGAAGACCGCGGAGAACTTCCGGGCTTTATGCACTGGAGAGATGGGCATTGGAAAAAATACTGGCAAACCACTCACTTATAAGGGCATGGTGTTTCATAGAGTAGTCAAAGACTTCATGATACAAGGAGGAGATTTCACAAATGCCAATGGAACTGGAGGAGAGTCTATTTACGGTGGTACTTTTGAAGATGAGACATTTGAGCTGAAACATGATAGGCCATTGTTATTGTCAATGGCAAACAGAGGAAAGGATACCAATGGGTCACAGTTTTTTATAACAACACAGCCGGCGCCGCATCTCGACAATGTGCACGTAGTGTTCGGGTCGGTGGTGGGGGGCGCGGCGCTGGTGCGGCAGCTGGAGGCGCTGTCCGTGGACCGCAACGCGCGCCCGCTGCAGGACGTGCTCGTCGTCAACTGCGGAGAGCTCGTCAAGATCAAGACCGTAAAAAAGCGAAAACAAGAGATGGAAAAAGACGAGAGCGAAGCCGAGTCTGACCCGTCGCAGAAGAAAGATAAGAAGAAGAAAAAAGAAAAAAAGGAGAAAAAGAAAGAAAAAAAGAGCAGGGAGGAGCCCGGCCACCCGCTGGCGCTCAGCACGCCGCTCGACCCGCGCGAGATCCCCGCCGTGCCCCCGCACAGCTTCCTGCTGCGGCCCGAGGGCGCCACCCGCCGCGACCCCGCCCGCGACCCCGCTCGGGACAGAGGCCGGTACCGCGAGAGGGACCGGAACGTGTACACCCGCAGCGGGAGGATCATCAAGGGGAGAGGAGTCTTTCGGTACCGCACGCCGTCCCGCTCCCGCTCCCGCTCCCGCTCGCGCTCGGGCACGCCGCCGCACTGGCGCCAGGCGCAGCGCCGCATCATCAAGCTGTCCGAGTTCGAGCGCGCCGAGGGGGAGCGAGCCCAGCGCGAGCAGCGCGCGGCGCGCCGGGAGCGGCCCGCCCGCGCCGACACCGAGGAGGGCGGCACCCCCGAGCGCCCCGCCCCCCACCCCGCGCCCCACCCCGCGCCCCACCCCGCGCCCAAGGGAGGAGCCGCCGACGCGAGCGGCGAGCGCGTGGACTACAACGCGCTGGACTTCGAAGCGGACACCGAGCACGACGATGAACATAACTTCCGGAAACGCAAAAATGAAGGCTCCCCGACGAGGACGTCCTCCCGGGCAGAGAAACTCGCCCTGGCGCTCGGAGTCAACCCCAAGCACGGGGAGGACAGCCGCGACAGCTACCGCCCCCCGCGCGACGCCCGGCGCGACCTCCCCCCGCGCCTCCCCTCCGCCGTGACCCCCGCGCCCCCCGCCGCGCCCCCGGACCCCGCCGCGCCCTACGACCCCGTCACGCTGCTGCGCTACTCGCTGCACAGGGACAGGAAGGCAACCGACACCAGGAAAGAAGAGCTCGAGCGAGCTGAGCGCCGCGACAAGGACGACAAAACTGACCGCCACAAGAGCGACAGAGACGACAAGCATCGCAAGCGTTCCGAGTCCAGGGGACGCGACCGCAGGCCGAGCGACGCGGACCGGCGCAGGACCCCCGACCGGGAACACAGGGGCCGGGGGGACAGGGACAGGGCGCGGGACCGGAGGCGGCGGTCGCGCTCCGACGACAGGTCCAGCTCCCCCCGACAGCGCCATCGCAAGAGGTCCAGAGAGGCGCCCGGCTCCGACGCCGCCCGCCCGGACGACAAGCGGAAGGAGGACGAGCGGAACGAGGCGCGCAAGGAGCTCATGGAGATCGTCCGTCTCATCAAGTCTCGACAAAAGAACAGGGAGAACAAGGCGTCCGCAGTGAGTAAAGACAAGGAAGCCGGCGAGTCTTCCGGCTCGGAGCCCGAGGCGTCGCCCCGCGCCCCCGCCCGCGCCCCGCCCCGCGTGTAG

Protein

MTVDGEDKKPRDRVFMDISIGGMPSGRIVFELFNEVAPKTAENFRALCTGEMGIGKNTGKPLTYKGMVFHRVVKDFMIQGGDFTNANGTGGESIYGGTFEDETFELKHDRPLLLSMANRGKDTNGSQFFITTQPAPHLDNVHVVFGSVVGGAALVRQLEALSVDRNARPLQDVLVVNCGELVKIKTVKKRKQEMEKDESEAESDPSQKKDKKKKKEKKEKKKEKKSREEPGHPLALSTPLDPREIPAVPPHSFLLRPEGATRRDPARDPARDRGRYRERDRNVYTRSGRIIKGRGVFRYRTPSRSRSRSRSRSGTPPHWRQAQRRIIKLSEFERAEGERAQREQRAARRERPARADTEEGGTPERPAPHPAPHPAPHPAPKGGAADASGERVDYNALDFEADTEHDDEHNFRKRKNEGSPTRTSSRAEKLALALGVNPKHGEDSRDSYRPPRDARRDLPPRLPSAVTPAPPAAPPDPAAPYDPVTLLRYSLHRDRKATDTRKEELERAERRDKDDKTDRHKSDRDDKHRKRSESRGRDRRPSDADRRRTPDREHRGRGDRDRARDRRRRSRSDDRSSSPRQRHRKRSREAPGSDAARPDDKRKEDERNEARKELMEIVRLIKSRQKNRENKASAVSKDKEAGESSGSEPEASPRAPARAPPRV

Uniprot

A0A2H1V9G9 A0A2W1BRQ6 A0A2A4JKZ4 A0A2A4JME5 D7EIA4

Pubmed

28756777 18362917 19820115

EMBL

ODYU01001382 SOQ37478.1 KZ149979 PZC75837.1 NWSH01001073 PCG72755.1 + More
PCG72754.1 KQ972797 EFA11754.2

Proteomes

UP000218220 UP000007266

Pfam

PF00160 Pro_isomerase

Interpro

IPR002130   Cyclophilin-type_PPIase_dom        + More
IPR029000   Cyclophilin-like_dom_sf
IPR020892   Cyclophilin-type_PPIase_CS

SUPFAM

SSF50891 SSF50891

Gene 3D

2.40.100.10

ProteinModelPortal

A0A2H1V9G9 A0A2W1BRQ6 A0A2A4JKZ4 A0A2A4JME5 D7EIA4

PDB

1C5F E-value=8.39695e-64, Score=620

KEGG

101741386 K09566 peptidyl-prolyl isomerase G (cyclophilin G) [EC:5.2.1.8] | (RefSeq) peptidyl-prolyl cis-trans

GO

GO:0003755 GO:0042026 GO:0016018 GO:0051082 GO:0000413 GO:0006457 GO:0006355 GO:0007179 GO:0005515 GO:0016021 GO:0045211 GO:0006281 GO:0048384

Length:

663

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04527

Exp number, first 60 AAs:

0.02836

Total prob of N-in:

0.00287

outside

1 - 663

Pi

270.110276

Theta

223.781361

Tajima's D

0.579034

CLR

0.086332

CSRT

0.545522723863807

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics