Gene
KWMTBOMO03142
Pre Gene Modal
BGIBMGA007320
Annotation
PREDICTED:_late_histone_H2B.L4-like_[Bombyx_mori]
Location
Full name
Histone H2B
Location in the cell
Mitochondrial Reliability : 2.577
Sequence
CDS
ATGTACCTACCTACTACCCTGCCTTGGCCGCGTGGTGACGGCATTAGAATACTTTTGTCACCACCCCCATTACCATCTCAGGAGAGTCGCGTACAACCAAAAAAAAAAAAAAAGAACTATCAAAGCTTCTCGATCTATCTTTACAAATTACTGAGGGCCGTCACGCAAGACAACCTGGGCATCTCAAGGAAGTCGATGTTGATTATGAATAACTTCGTTAACGATATGCTGGAGAAGATCGCCGTGGAAGCCGGTAGGCTGGTCGCCCACGGCAAGAAGAATACTCTGGGCAGCAGAGAAATCCAATCTGCCGTCAAGTTGCTAGTCCCGGGAGAGCTGGCCACACACGCCAACTCTGAGGGCATGAAGGCCATAAGCATGTACCATTTGAGCAAAAAGAAAGACTCCAAAAGCAACGACTCGGAATGA
Protein
MYLPTTLPWPRGDGIRILLSPPPLPSQESRVQPKKKKKNYQSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAISMYHLSKKKDSKSNDSE
Summary
Subunit
The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
Similarity
Belongs to the histone H2B family.
Keywords
Chromosome
DNA-binding
Isopeptide bond
Nucleosome core
Nucleus
Ubl conjugation
Feature
chain Histone H2B
Uniprot
Pubmed
EMBL
Proteomes
PRIDE
Pfam
PF00125 Histone
SUPFAM
SSF47113
SSF47113
Gene 3D
ProteinModelPortal
PDB
4KHA
E-value=1.01915e-23,
Score=266
Ontologies
GO
PANTHER
Topology
Subcellular location
Nucleus
Chromosome
Chromosome
Length:
142
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0102
Exp number, first 60 AAs:
0.00901
Total prob of N-in:
0.03457
outside
1 - 142
Population Genetic Test Statistics
Pi
6.868749
Theta
14.8129
Tajima's D
-1.350468
CLR
113.833828
CSRT
0.0791460426978651
Interpretation
Uncertain
