Gene

KWMTBOMO03132  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005781

Annotation

heat_shock_protein_25.4_precursor_[Bombyx_mori]

Location

Bomo_Chr5(+):18881908-18882702      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.691

CDS

ATGATCGCCTTAGTGTTGTGCGGACTGCTGGCGGCGGTCTCGGCCGCGCCACAGTACTACCATGGCTCGTCACATTGGCCGTATCACCATTACGACCCCTTCAGTCCTTACGTTCGGGAAAGCATGTTGGACACACATTCGCTTTGGTCCAACCTTGCCAACGAAATGCAACACTTGGACAACATGATGAAGGAGCTGTCGTTGAAGTTCCCCAGCATTATAAACGAAGGACGCGTGGAAGGCGACAAGTATCAGATATCTATTCACCTGCCTGGTTACGAACAGAAAGACATCAACGTGAAAGCGAAAAATGGAGTGCTGATGGTGCAGGCTAACAGTGCTTTTAATCATTACTTGAAAATACAGAACCTTCCCTGGGATGTGAATTCCGAAGGCAGCTGGGTTTACGAGAAAGACGTGTTGAAAATCACCTTCCCGCTGAAGCAAAAGCAGCCAGAGGATAGCAAGAGGCCAGTTGCAGAGCCCACTGAGACGACCTCTACGAATGTAAGTCGTGAAGAGATGGAGTTCACCACCGAGAGCAACGTGCGGGACGTTGACGTCGGCTTGGAGACAGCCCAGAAGACCAATGAGATCGCGAAAGCTGTAGAAGCGACCACGTACGCTGTCAACATCAGAGACGATGCGGAGTTCTTGCCGATTCCATATTAA

Protein

MIALVLCGLLAAVSAAPQYYHGSSHWPYHHYDPFSPYVRESMLDTHSLWSNLANEMQHLDNMMKELSLKFPSIINEGRVEGDKYQISIHLPGYEQKDINVKAKNGVLMVQANSAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSREEMEFTTESNVRDVDVGLETAQKTNEIAKAVEATTYAVNIRDDAEFLPIPY

Similarity

Belongs to the small heat shock protein (HSP20) family.

Uniprot

B0ZT34   A0A185L2W3   H9J8E0   A0A2D1CRQ8   A0A2W1BIB4   A0A075BRB8   + More
A0A2H4LHL6   A0A3G1T1F5   A0A2A4K8A8   A0A2H1WH59   A0A0N1INM3   I3QQD6   A0A212F880   I4DIZ7   A0A194PQE2   A0A1E1WEW2   S4PTB6   A0A1E1WLP8   I4DMK6   A0A0K0XQX6   A0A212ETW0  

Pubmed

19121390    20077032    27265031    28756777    26354079    22118469    + More
22651552    23622113    26196395   

EMBL

BABH01027307    EU401668    ACA25336.1    KM881572    AJQ22647.1    BABH01027306    + More
KX977587    ATN45246.1    KZ150027    PZC74792.1    KC689793    AGQ42771.1    KX845565    ATB54996.1    MG992389    AXY94827.1    NWSH01000034    PCG80461.1    ODYU01008627    SOQ52367.1    KQ460970    KPJ10173.1    JQ707907    AFK14101.1    AGBW02009775    OWR49946.1    AK401265    BAM17887.1    KQ459597    KPI95183.1    GDQN01005524    JAT85530.1    GAIX01012323    JAA80237.1    GDQN01003124    JAT87930.1    AK402524    BAM19146.1    KP843901    AKS40080.1    AGBW02012528    OWR44935.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000007151    UP000053268   

PRIDE

B0ZT34    H9J8E0   

Pfam

PF17886   ArsA_HSP20        + More
PF00011   HSP20

Interpro

IPR040612   ArsA_HSP20-like        + More
IPR008978   HSP20-like_chaperone       
IPR002068   A-crystallin/Hsp20_dom       

SUPFAM

SSF49764   SSF49764       

Gene 3D

2.60.40.790    

ProteinModelPortal

B0ZT34   A0A185L2W3   H9J8E0   A0A2D1CRQ8   A0A2W1BIB4   A0A075BRB8   + More
A0A2H4LHL6   A0A3G1T1F5   A0A2A4K8A8   A0A2H1WH59   A0A0N1INM3   I3QQD6   A0A212F880   I4DIZ7   A0A194PQE2   A0A1E1WEW2   S4PTB6   A0A1E1WLP8   I4DMK6   A0A0K0XQX6   A0A212ETW0  

KEGG

100141506    no KO assigned | (RefSeq) heat shock protein 25.4

GO

SignalP

Position:   1 - 15,         Likelihood:  0.987095

 

 

Length:

223

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.552229999999999

Exp number, first 60 AAs:

0.552229999999999

Total prob of N-in:

0.03389

outside

1  -  223

 

 

Pi

8.448364

Theta

7.639212

Tajima's D

0.410631

CLR

2.332067

CSRT

0.504624768761562

Interpretation

Uncertain