Gene

KWMTBOMO03127

Pre Gene Modal

BGIBMGA005779

Annotation

PREDICTED:_zinc_transporter_2-like_[Bombyx_mori]

Location

Bomo_Chr5(+):18839278-18863612      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.535

CDS

ATGTCATCACATTTAATTAACGAAAAATATCATAATGATACAAAAATAAATACATTGAACGCGTTCACTGATAAGAATTTAGTACCATTGAGTGGTAGATATAGATCGAAAAGTTTGTCTAGTGATAAGTTGAATAAAACAAACGCTGATCGTGCGGCTATATTGGAAGATGTCGAGGTCCAGTACATAACAGACAAGTCTGAGACACCTGGCTGTCTCGTCGGAAATAGAGATATGGTCAGCGGACAACTGAATATAAACGGGTACAATGATGGGCACGTATCGTACGGGACGGACAATCAGATCCGTGGGCGGAGAGTCATATTTTGTGTCCACGGGAACCCGTCGACGGGATGCTGTGCGGTCATCGAGACCAGCGCCGACGGCGATGACTCGGAGAAAAGGAACGGAAGCATCTCAGAGGCTGAAAGGCATTGTCACAGATCGCGAAACGAAGAGATAGACAAGAGAGCGAGAAGGAAACTCATCGTGGCCAGCGTGCTGTGCGTCATATTCATGATAGGGGAAATAGTAGGCGGGTACTTGTCCAACAGCTTAGCGATAGCGACCGACGCCGCGCACCTGCTCACCGACTTCGCCAGCTTCATGATATCCTTGTTCTCGCTATGGGTCGCTAACAGACCCGCCACCAGACGGATGTCGTTCGGGTGGTACCGCGCGGAGGTGATCGGCGCGCTGACGTCGGTGCTGCTCATCTGGGTGGTGACGGGCGTGCTGGTGTACCTCGCCGTGCAGCGGGTGCTCTACCAGGACTTCAACATCGACGCCACCGTCATGCTCATCACCTCCGCCGTCGGCGTCGCCGTCAACCTCGTCATGGGCCTGACTCTGCACCAGCACGGGCACTCGCACGGGGGAGGAGCCCATGGACACTCGCACGGACCCAGCAACCCCGTCCTCAACAACAGGGAGGTGGCGGGCGCGGAGGCGGGGGCCGGGGGGGCGGCGCGCGCGGAGAACATCAACGTGCGCGCCGCCTTCATCCACGTGCTCGGAGACTTCCTGCAGAGCTTCGGCGTGCTCGTCGCCGCCATCGTCATCTACTTCGAGCCGAGTTGGATCCTCATGGACCCGATCTGCACGTTCCTGTTTTCCATCCTGGTTCTCATCACGACCTTCAATATCATCAAAGACGCGCTTCTTGTGCTGATGGAGGGCTCCCCCCGAGGGCTGGACTTCCAGGAGGTGGCGGACACGTTCCTGGCGCTGCCGGGCGTGCTGCGCATCCACAACGTGCGCATGTGGGCGCTCACGCTCGACAAGCCCGCGCTCTCCGCGCACCTCGCCATCCGTAGCGGAGTCAGCCCGCAGAAAGTCTTGGAAGAGGCGACCCGTCTCGTCCACGAGAAGTACAACTTCTTCGAGATGACCCTCCAGATCGAAGAGTTCAGCGACGGCATGGAGCAGTGCAGCCAATGCAAGGTGCCCCAGGCCTGA

Protein

MSSHLINEKYHNDTKINTLNAFTDKNLVPLSGRYRSKSLSSDKLNKTNADRAAILEDVEVQYITDKSETPGCLVGNRDMVSGQLNINGYNDGHVSYGTDNQIRGRRVIFCVHGNPSTGCCAVIETSADGDDSEKRNGSISEAERHCHRSRNEEIDKRARRKLIVASVLCVIFMIGEIVGGYLSNSLAIATDAAHLLTDFASFMISLFSLWVANRPATRRMSFGWYRAEVIGALTSVLLIWVVTGVLVYLAVQRVLYQDFNIDATVMLITSAVGVAVNLVMGLTLHQHGHSHGGGAHGHSHGPSNPVLNNREVAGAEAGAGGAARAENINVRAAFIHVLGDFLQSFGVLVAAIVIYFEPSWILMDPICTFLFSILVLITTFNIIKDALLVLMEGSPRGLDFQEVADTFLALPGVLRIHNVRMWALTLDKPALSAHLAIRSGVSPQKVLEEATRLVHEKYNFFEMTLQIEEFSDGMEQCSQCKVPQA

Uniprot

A0A2W1BPI4   S4NNW6   A0A2A4JWG0   A0A0N1IE90   A0A212EYW4   A0A194PVM0   + More
A0A2H1WLC0   A0A3L8DMU6   A0A026X3D2   A0A151I8Y3   A0A0L7RIU3   A0A1Y1LJA5   A0A1Y1LFL2   E2C512   A0A151WFV1   A0A1Y1LHS7   A0A088AHX8   A0A158NVB4   A0A310SBF8   N6TL29   A0A154P8B0   A0A0N0U358   A0A0J7L8I6   A0A2A3EBR5   A0A2J7QXR7   E2AEM6   A0A151J135   A0A195BU08   A0A1B6H9H4   A0A1B6IV94   A0A0P5WZ45   A0A146L1H4   A0A146KY03   A0A0P5NK62   A0A0K2TGL1   A0A336KV99   A0A146M9D9   A0A336MYR4   A0A084VKE9   A0A2I9LPZ2   A0A0P4ZUY3   T1E9Y5   A0A1B6G1C1   A0A195FXM8   A0A293N542   A0A1Z5KXN7   B4MVE8   W5MBF7   A0A0H3YKE4   I5AMN6   A0A1V9XAY6   K1R1V1   T2M9Y5   A0A1U8C809   G1SRW9   G1TUI5   A0A087X4V3   A0A1I8HLT5   A0A267DXD0   A0A267DDB9   A0A3P9AP17   A0A2R7W4F4   A0A1I8JKA6   A0A0L8FZN5   A0A0N5AI03   A0A3B5AXR7   A0A3B5KS11   A0A1W2WJS1   A0A094ZEU5   A0A0N4V2X9   A0A3Q0DQK8  

Pubmed

28756777    23622113    26354079    22118469    30249741    24508170    + More
28004739    20798317    21347285    23537049    26823975    24438588    29248469    28528879    17994087    26057828    15632085    28327890    22992520    24065732    26319212    21993624    26392545    25069045    21551351    22246508   

EMBL

KZ150027    PZC74786.1    GAIX01012109    JAA80451.1    NWSH01000548    PCG75730.1    + More
KQ460970    KPJ10180.1    AGBW02011425    OWR46682.1    KQ459597    KPI95175.1    ODYU01009404    SOQ53807.1    QOIP01000006    RLU21249.1    KK107039    EZA61904.1    KQ978330    KYM95087.1    KQ414583    KOC70785.1    GEZM01057117    JAV72440.1    GEZM01057118    JAV72439.1    GL452714    EFN76966.1    KQ983203    KYQ46716.1    GEZM01057116    JAV72441.1    ADTU01027002    ADTU01027003    KQ775960    OAD52234.1    APGK01020367    KB740193    KB631602    ENN81139.1    ERL84537.1    KQ434826    KZC07448.1    KQ435969    KOX67852.1    LBMM01000270    KMR02239.1    KZ288310    PBC28649.1    NEVH01009372    PNF33371.1    GL438870    EFN68101.1    KQ980575    KYN15496.1    KQ976417    KYM89904.1    GECU01036331    JAS71375.1    GECU01016842    JAS90864.1    GDIP01079842    JAM23873.1    GDHC01016820    JAQ01809.1    GDHC01017930    JAQ00699.1    GDIQ01141140    JAL10586.1    HACA01007817    HACA01007818    CDW25178.1    UFQS01001002    UFQT01001002    SSX08470.1    SSX28404.1    GDHC01002266    JAQ16363.1    UFQS01001562    UFQT01001562    SSX11451.1    SSX31018.1    ATLV01014190    ATLV01014191    ATLV01014192    ATLV01014193    ATLV01014194    KE524948    KFB38443.1    GFWZ01000477    MBW20467.1    GDIP01207688    JAJ15714.1    GAMD01000887    JAB00704.1    GECZ01013549    JAS56220.1    KQ981193    KYN45181.1    GFWV01022581    MAA47308.1    GFJQ02007150    JAV99819.1    CH963857    EDW76493.2    AHAT01009594    KT163678    AKN21628.1    CH379060    EIM52221.1    MNPL01017151    OQR70561.1    JH816438    EKC35075.1    HAAD01002712    CDG68944.1    AAGW02062867    AYCK01018097    NIVC01003111    PAA53239.1    NIVC01004502    PAA47290.1    KK854274    PTY14091.1    KQ425015    KOF70123.1    KL250523    KGB32935.1    UXUI01007760    VDD89337.1   

Proteomes

UP000218220    UP000053240    UP000007151    UP000053268    UP000279307    UP000053097    + More
UP000078542    UP000053825    UP000008237    UP000075809    UP000005203    UP000005205    UP000019118    UP000030742    UP000076502    UP000053105    UP000036403    UP000242457    UP000235965    UP000000311    UP000078492    UP000078540    UP000030765    UP000078541    UP000007798    UP000018468    UP000001819    UP000192247    UP000005408    UP000189706    UP000001811    UP000028760    UP000095280    UP000215902    UP000265140    UP000053454    UP000046393    UP000261400    UP000005226    UP000038041    UP000274131    UP000189704   

Pfam

PF01545   Cation_efflux        + More
PF06427   UDP-g_GGTase
PF18401   Thioredoxin_13
PF18402   Thioredoxin_14
PF18404   Glyco_transf_24
PF18400   Thioredoxin_12
PF18403   Thioredoxin_15

Interpro

IPR002524   Cation_efflux        + More
IPR027469   Cation_efflux_TMD_sf       
IPR036837   Cation_efflux_CTD_sf       
IPR040694   UGGT_TRXL_2       
IPR040525   UGGT_TRXL_4       
IPR040693   UGGT_TRXL_1       
IPR029044   Nucleotide-diphossugar_trans       
IPR040692   UGGT_TRXL_3       
IPR009448   UDP-g_GGtrans       
IPR040497   Glyco_transf_24       
IPR033572   ZnT-8       

SUPFAM

SSF161111   SSF161111        + More
SSF160240   SSF160240       
SSF53448   SSF53448       

Gene 3D

1.20.1510.10     3.90.550.10    

ProteinModelPortal

A0A2W1BPI4   S4NNW6   A0A2A4JWG0   A0A0N1IE90   A0A212EYW4   A0A194PVM0   + More
A0A2H1WLC0   A0A3L8DMU6   A0A026X3D2   A0A151I8Y3   A0A0L7RIU3   A0A1Y1LJA5   A0A1Y1LFL2   E2C512   A0A151WFV1   A0A1Y1LHS7   A0A088AHX8   A0A158NVB4   A0A310SBF8   N6TL29   A0A154P8B0   A0A0N0U358   A0A0J7L8I6   A0A2A3EBR5   A0A2J7QXR7   E2AEM6   A0A151J135   A0A195BU08   A0A1B6H9H4   A0A1B6IV94   A0A0P5WZ45   A0A146L1H4   A0A146KY03   A0A0P5NK62   A0A0K2TGL1   A0A336KV99   A0A146M9D9   A0A336MYR4   A0A084VKE9   A0A2I9LPZ2   A0A0P4ZUY3   T1E9Y5   A0A1B6G1C1   A0A195FXM8   A0A293N542   A0A1Z5KXN7   B4MVE8   W5MBF7   A0A0H3YKE4   I5AMN6   A0A1V9XAY6   K1R1V1   T2M9Y5   A0A1U8C809   G1SRW9   G1TUI5   A0A087X4V3   A0A1I8HLT5   A0A267DXD0   A0A267DDB9   A0A3P9AP17   A0A2R7W4F4   A0A1I8JKA6   A0A0L8FZN5   A0A0N5AI03   A0A3B5AXR7   A0A3B5KS11   A0A1W2WJS1   A0A094ZEU5   A0A0N4V2X9   A0A3Q0DQK8  

KEGG

101736920    K14689 solute carrier family 30 (zinc transporter), member 2 | (RefSeq) zinc transporter 2-like

GO

GO:0008324   GO:0016021   GO:0016740   GO:0003980   GO:0006486   GO:0071577   GO:0005886   GO:0010043   GO:0005385   GO:0061088   GO:0061090   GO:0005770   GO:0043231   GO:0005623   GO:0006882   GO:0003323   GO:0042593   GO:0006812   GO:0008017   GO:0005216   GO:0006811   GO:0045211   GO:0006281   GO:0048384   GO:0055085  

PANTHER

PTHR11226   PTHR11562:SF37  

Length:

485

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

130.70027

Exp number, first 60 AAs:

0

Total prob of N-in:

0.99834

inside

1  -  161

TMhelix

162  -  184

outside

185  -  198

TMhelix

199  -  216

inside

217  -  228

TMhelix

229  -  251

outside

252  -  260

TMhelix

261  -  283

inside

284  -  333

TMhelix

334  -  356

outside

357  -  360

TMhelix

361  -  383

inside

384  -  485

 

 

Pi

2.519487

Theta

20.385644

Tajima's D

-0.895076

CLR

1.577081

CSRT

0.15829208539573

Interpretation

Uncertain