SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03126
Pre Gene Modal
BGIBMGA005778
Annotation
Amine_oxidase_(Flavin-containing)_[Operophtera_brumata]
Full name
Amine oxidase      
Location in the cell
Nuclear   Reliability : 2.301
 

Sequence

CDS
ATGGTACAGAAACTCGATGAAACTCATAAGAAGAGTGTTAAAGCTGACGTAATTATTTTAGGATGCAGTTTATCAGGGATCGTGGCCGCTCACAAGCTAAAGAGGAGGTTCGGAGATTCTATGGATATTGTCGTGTTAGACCTGGCGGGACAGACACAAAGCTATTCCAAGTATAATGTTGTCTTCGAAGATGTAGAAAAGGACAGCCAGGATATCATAACCGAGCCGGATTTTCAAGGAACCGCTAAGCAAATGATTGAGAATGTTGCGCGGTTTTATCTAGCTAAATATGCCAAAGAATTCCACGTGCCCCTTCCAGACGTCATAATAGCCCCGGAAAGAGTCAGGACTAGGTTGACCAAGCTGTTCCAGCACCAAAACGGTAACACTGTAGAATGTACCAATGACTTCCACGAGTTCGACTATCTCAGCGTGATGGAGAGGTTCGAGATTAACCAATACCAGAACATGTTAGATCAGAGCATGAAGGACTTATTTCAGAGACACAAAGTAGATTTGCAAGCAGAAAGAAATAGGTTAAGATACTACGATCAGACGTGTATGGAAAGTCATATACGGGGGGCATTGTTGTTTCCAACTTCTAAAGAAATAATGAGATCTACCGTTAAGCTGGTCTGTGGCGCACCGGCTAATTCTGTGTCTGTGTTATTCTATCTTCATCAATGTTACAGGACCGGCAGTACTAAAAACCATTTAGATGGAAATAATACAAAGTTTAGGGAGAAGACTTTGGGTCACTGTCGGAAACGTCTCCAGAAAAAACTGCAGCAGAGCATCGCTGACATAACTCTGTCCGCTAAATCTATTAAGGAAATAAGGACATACTCTGATGAACAAGTTATTCTGGAAACAATAAAAGGCGAAACAGATTATGTGTGTAATTTGTTGGCGATGGCATTAAAACCTGACCAGCTCGACAGCATTCGAGTTGAGGATGAGCTGCTGGCGGTAAATTTGGCTAATAAGATTCGCGCCATGATTCCGGGTCGTGCCAGGAGGTTTGTTATACAATATGAAGATAACTTTTGGACGAAATTGGGCTACAGCGGTGACATTCTCAGCATACGTGGTCCAATCATCTGGGCAATGGAGAAACCAGAAATGTCTACGACTGGTAGCTTAGAGAAATATCCCTCACTGATCGGGTATTTGATGGTCCGTGATGAGAGTGACGGGGACAGTAAAGAAGCCGTCATAGAACAACTTATAAAACTATTCGGAAATAACGCAAGTTCCCCAGTGAACTACAAAGAGACAAACATAGCGGATTTGTTCATACCTAGGTGTGGAGATTATGTAGCACTTAAAGAGCTAACAGGCGAAGGGAGTCCGAAACACTTAGAGTGGGGGACGTTGGACATATTCGCCGATGGAGACGTTGCTGCTGCTCTGGAAGCTGGGCACACTGCCTACCTTAATCTGCTGACCAGCCTCCGTCCGCAAGCTCAGACATACGAGGATCGGAGTACGGCAGATTGGCCACGGTTTCTGGAAGATAGCCCTGTTCAAAGGTGGTATTCCCACGTAAATTTTGCTAATGGTATACATTTACTGGTGTACTCTGCTGCTGCGTATTACGGCTTACGTGTTGTGAGGTCTTATTTCCGGAAATAA
Protein
MVQKLDETHKKSVKADVIILGCSLSGIVAAHKLKRRFGDSMDIVVLDLAGQTQSYSKYNVVFEDVEKDSQDIITEPDFQGTAKQMIENVARFYLAKYAKEFHVPLPDVIIAPERVRTRLTKLFQHQNGNTVECTNDFHEFDYLSVMERFEINQYQNMLDQSMKDLFQRHKVDLQAERNRLRYYDQTCMESHIRGALLFPTSKEIMRSTVKLVCGAPANSVSVLFYLHQCYRTGSTKNHLDGNNTKFREKTLGHCRKRLQKKLQQSIADITLSAKSIKEIRTYSDEQVILETIKGETDYVCNLLAMALKPDQLDSIRVEDELLAVNLANKIRAMIPGRARRFVIQYEDNFWTKLGYSGDILSIRGPIIWAMEKPEMSTTGSLEKYPSLIGYLMVRDESDGDSKEAVIEQLIKLFGNNASSPVNYKETNIADLFIPRCGDYVALKELTGEGSPKHLEWGTLDIFADGDVAAALEAGHTAYLNLLTSLRPQAQTYEDRSTADWPRFLEDSPVQRWYSHVNFANGIHLLVYSAAAYYGLRVVRSYFRK

Summary

Cofactor
FAD
Similarity
Belongs to the flavin monoamine oxidase family.
Belongs to the ubiquitin-conjugating enzyme family.
EC Number
1.4.3.-
Pfam
PF01593   Amino_oxidase        + More
PF00474   SSF
PF01266   DAO
PF00179   UQ_con
Interpro
IPR002937   Amino_oxidase        + More
IPR036188   FAD/NAD-bd_sf       
IPR001613   Flavin_amine_oxidase       
IPR001734   Na/solute_symporter       
IPR038377   Na/Glc_symporter_sf       
IPR006311   TAT_signal       
IPR006076   FAD-dep_OxRdtase       
IPR023313   UBQ-conjugating_AS       
IPR000608   UBQ-conjugat_E2       
IPR016135   UBQ-conjugating_enzyme/RWD       
SUPFAM
SSF51905   SSF51905        + More
SSF54495   SSF54495       
Gene 3D
PDB
1O5W     E-value=8.68287e-05,     Score=111

Ontologies

Topology

Length:
544
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
18.74274
Exp number, first 60 AAs:
5.27575
Total prob of N-in:
0.28386
outside
1  -  544
 
 

Population Genetic Test Statistics

Pi
5.818775
Theta
7.105001
Tajima's D
-0.567209
CLR
0.003831
CSRT
0.226638668066597
Interpretation
Uncertain
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