SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03122  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA005777
Annotation
PREDICTED:_kinesin-like_protein_a_isoform_X2_[Bombyx_mori]
Full name
Kinesin-like protein      
Location in the cell
Nuclear   Reliability : 2.684
 

Sequence

CDS
ATGGATGACGGCACAGTTAGAATTCGCTCCGGTATCAACATCAACATTAAAAGAACAGATGGTCGGGTCCATTCTGCGATCGTGGCCTCAGTTAACTTGGAGACGCGCTCAGTTGCTGTGGAATGGTTCGAGCGCGGCGAGACCAAGGGCAAGGAGATCGAGATAGATGCCATCCTAGCGCTGAACCCTGAACTGGCGAGTGGGCCGCGGCACCACACTCCGCACCTGCAGCCGATGCCCAACAAACTAGCCAGGGATATGACGCGGCAGTCCATACCCGTTGCGACCAAAGCGCCCGTGACCAGGGTGACGCGGAACAATCAGATGCGGGTGTCGAATGTGGGCGGCGCCTACACAAACGGTCACGGCGGCGACACGACGGGGCGGCGCGGCGTCGAGAATGTACCCCCGGCACAGCTGCCGCCACAGCAGCCGCCGCCCAGTTCCAGAATCACACAGCAGTTTTCAGGTTCGGGTATTTCCAGTAGGGCGGCCGGCGTCGCGTCCACCGCGTCCGTGCCCGCCGGCGCCACCTCCGCCGTCACGTCCGCCGTCACATCCGGCGTCACGTCCGGCGTCACGTCCGGCGCGGTGCGGCGCTCCAACGTCGTCAAGGAGGTCGAGCGGCTCAAGGAGAACAGGGAGAAGAGAAGGCAGAGGCAAGCGGAACTTAAGGAAGAAAAGGAAGCCCTCATGAACCTGGACCCTGGCAACCCGAACTGGGAGTTCCTGGCGATGATCCGGGAGTACCAGAACAGCATCGAGTTCAGGCCGCTCACCGGCACCGAGCCCGTCGAGGACCACCAGATCACGGTCTGCGTGCGGAAGAGGCCGCTCAACAAGAAGGAGCTTAATAAGAAAGAGGTGGACGTGATCAGCGTCCCCACCAAGGACCAGATGATAGTCCACGAGCCCAAGAACAAAGTGGACCTCACGAAGTATTTAGAAAATCAAAAGTTTCGATTTGACTACGCGTTCGACGACTCCTGCACTAACGAAATTGTTTACAAGTACACGGCCAAGCCGCTGGTGGCGACCATCTTCGAGGGCGGCATGGCCACCTGCTTCGCGTACGGACAGACCGGCTCCGGCAAGACGCACACCATGGGCGGAGACTTCCAGGGCAAGACCCAGGACTGCAAGAAGGGCATATACGCCATGGCGGCGCGCGACGTGTTCACCTACCTGCGCGCCCCCAAGTACAAGCCGCTCAACCTCATCGTGTCCGCCTCCTTCTTCGAGATCTACTCCGGGAAGGTGTTCGACCTGCTAGCGGACAAGGCCAAGCTGAGGGTGTTGGAGGACGGCAAGCAGCAAGTGCAGATCGTGGGCCTCACCGAGAAGGTGGTGGACAACGTCGACGAGGTGCTCAAGCTCATCCAGCACGGCAACGCCGCCCGGACCTCCGGCCAGACGTCGGCCAACTCCAACTCGTCGCGCTCGCACGCCGTGTTCCAGATCGTGGTGCGGTCCCCGGGCATGCACCGCGTGCACGGGAAGTTCTCGCTCATCGACCTGGCGGGCAACGAGCGCGGCGCCGACACCTCCTCCGCCAACCGACAGACCAGAATGGAAAGCGCGGAGATCAACAAGTCCCTCCTGGCACTGAAGGAGTGCATCCGCGCGCTGGGCATGAAGGGCAACAACCACCTGCCCTTCCGCGTGTCCAAGCTCACGCAGGTCCTGCGAGACAGCTTCATCGGGGACAAGTCTCGCACCTGCATGATCGCCATGATCTCGCCGGCCATGGCCTCCTGCGAGCACAGCCTCAACACGCTCCGATACGCCGACAGGGTGAAGGAGCTCGGCACCATGGACCCGTCCCGGCGCGGCGAGTCTCCGCCGCCCGACGTGGACATGCCGCCCGCGCGGGACGACCTGGCGCACCTGCGCTCCCTCAACGAGGGCGACATGTCGGCCGAGATGTACACCTTCCACGAAGCCATCGACGAGCTGCAGCGCGCGGAGGAGGAGGTCCTGGACAACCACAAGGCCGTGTCCGACTACATGCACCACGCGCTGCTCCGCGCCAACCATCTGCTCGCCATCACCAGGGACGTGGACTACGACCAGGACGCGTACGCGACGCAGTGGGAGGAGCTGCTGAACGAGCAGCTGGCCGTGCTGGCGCAGTCCCGCGACCTGGTGGCAGAGTTCCGCACCAAGCTCACGCGCGAGGAGCACATCTCGCGCCGCATACACAACTAG
Protein
MDDGTVRIRSGININIKRTDGRVHSAIVASVNLETRSVAVEWFERGETKGKEIEIDAILALNPELASGPRHHTPHLQPMPNKLARDMTRQSIPVATKAPVTRVTRNNQMRVSNVGGAYTNGHGGDTTGRRGVENVPPAQLPPQQPPPSSRITQQFSGSGISSRAAGVASTASVPAGATSAVTSAVTSGVTSGVTSGAVRRSNVVKEVERLKENREKRRQRQAELKEEKEALMNLDPGNPNWEFLAMIREYQNSIEFRPLTGTEPVEDHQITVCVRKRPLNKKELNKKEVDVISVPTKDQMIVHEPKNKVDLTKYLENQKFRFDYAFDDSCTNEIVYKYTAKPLVATIFEGGMATCFAYGQTGSGKTHTMGGDFQGKTQDCKKGIYAMAARDVFTYLRAPKYKPLNLIVSASFFEIYSGKVFDLLADKAKLRVLEDGKQQVQIVGLTEKVVDNVDEVLKLIQHGNAARTSGQTSANSNSSRSHAVFQIVVRSPGMHRVHGKFSLIDLAGNERGADTSSANRQTRMESAEINKSLLALKECIRALGMKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIAMISPAMASCEHSLNTLRYADRVKELGTMDPSRRGESPPPDVDMPPARDDLAHLRSLNEGDMSAEMYTFHEAIDELQRAEEEVLDNHKAVSDYMHHALLRANHLLAITRDVDYDQDAYATQWEELLNEQLAVLAQSRDLVAEFRTKLTREEHISRRIHN

Summary

Similarity
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
Feature
chain  Kinesin-like protein
EMBL
AB777870    BAM76583.1    AGBW02014532    OWR41503.1    EF092450    ABK92270.2    + More
BABH01027325    ODYU01000919    SOQ36406.1    GAIX01003658    JAA88902.1    KQ459597    KPI95170.1    KQ434809    KZC06423.1    GFDL01001072    JAV33973.1    KK107111    EZA59013.1    UFQS01000048    UFQT01000048    SSW98596.1    SSX18982.1    NEVH01002717    PNF41358.1    GDIQ01031159    JAN63578.1    GEBQ01026078    JAT13899.1    GEBQ01018073    JAT21904.1    GEDC01015164    JAS22134.1    SSW98595.1    SSX18981.1    CVRI01000020    CRK91245.1    GFDL01001028    JAV34017.1    ADTU01016350    ADTU01016351    SSW98594.1    SSX18980.1    DS235430    EEB15649.1    GANO01001314    JAB58557.1    GL762111    EFZ22144.1    GFDL01001201    JAV33844.1    GFXV01004691    MBW16496.1    GEDC01008102    JAS29196.1    ABLF02028647    ABLF02028649    GGMR01017669    MBY30288.1    LJIG01022763    KRT78849.1    GEDC01025100    GEDC01009938    JAS12198.1    JAS27360.1    GEBQ01017170    JAT22807.1    GFDL01000991    JAV34054.1    ABLF02010982    KK853035    KDR12224.1    GEDC01005710    JAS31588.1    GEDC01030278    JAS07020.1    GECL01001761    JAP04363.1    GEDC01030625    JAS06673.1    GFDL01000927    JAV34118.1    CH477296    EAT44385.1    GFDL01010342    JAV24703.1    GFDL01010465    JAV24580.1    GFDL01010652    JAV24393.1    GBXI01014248    GBXI01000261    JAD00044.1    JAD14031.1    GDHC01010180    JAQ08449.1    GGMS01000104    MBY69307.1    GL732617    EFX70810.1    GDIP01181029    JAJ42373.1    JXJN01000033    JXJN01000034    GDIQ01125921    JAL25805.1    GAKP01014116    GAKP01014114    GAKP01014113    JAC44836.1    CCAG010000051    CCAG010000052    GDHF01029521    GDHF01016998    GDHF01008110    JAI22793.1    JAI35316.1    JAI44204.1    GDIQ01247188    GDIQ01242825    GDIQ01238240    GDIQ01222043    GDIQ01222042    GDIQ01219391    GDIQ01209043    GDIQ01209042    GDIQ01206459    GDIQ01204991    GDIQ01203250    GDIQ01196753    GDIQ01190943    GDIQ01186657    GDIQ01186656    GDIQ01182758    GDIQ01178746    GDIQ01175312    GDIQ01168557    GDIQ01164914    GDIQ01162216    GDIQ01159164    GDIQ01144230    GDIQ01142778    GDIQ01141025    GDIQ01127518    GDIQ01125922    GDIQ01123676    GDIQ01119024    GDIQ01084548    GDIQ01084547    GDIQ01084546    GDIQ01083087    GDIQ01083086    GDIQ01083050    GDIQ01081587    GDIQ01077984    GDIQ01063448    GDIQ01061739    GDIQ01054001    GDIQ01052411    GDIQ01050810    LRGB01002793    JAN40736.1    KZS06312.1    DS232529    EDS43036.1    GDIQ01151957    JAK99768.1    JH432010    KA645714    AFP60343.1    JRES01000127    KNC33967.1    GFDF01000111    JAV13973.1    GDIQ01059749    JAN34988.1    GAMC01011814    GAMC01011813    JAB94742.1    LNIX01000008    OXA50798.1    GFDL01010250    JAV24795.1    GDIQ01162217    JAK89508.1    GDIQ01117532    JAL34194.1    GFDL01009452    JAV25593.1    LJIJ01000641    ODM95639.1    GBHO01038410    GBRD01006961    GDHC01004837    JAG05194.1    JAG58860.1    JAQ13792.1    GDIP01007634    JAM96081.1    CH933810    EDW06665.1    KQ971307    EFA11416.2    CP012528    ALC48876.1    GBGD01000584    JAC88305.1    PYGN01003034    PSN29723.1   
Pfam
PF00225   Kinesin
Interpro
IPR001752   Kinesin_motor_dom        + More
IPR027640   Kinesin-like_fam       
IPR027417   P-loop_NTPase       
IPR036961   Kinesin_motor_dom_sf       
IPR019821   Kinesin_motor_CS       
SUPFAM
SSF52540   SSF52540       
Gene 3D
PDB
6B0L     E-value=0,     Score=1701

Ontologies

Topology

Length:
735
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.05739
Exp number, first 60 AAs:
0.01262
Total prob of N-in:
0.00294
outside
1  -  735
 
 

Population Genetic Test Statistics

Pi
31.249121
Theta
26.411803
Tajima's D
0.109124
CLR
1.528302
CSRT
0.406979651017449
Interpretation
Uncertain
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