Gene

KWMTBOMO03111

Pre Gene Modal

BGIBMGA005799

Annotation

PREDICTED:_Williams-Beuren_syndrome_chromosomal_region_16_protein-like_[Amyelois_transitella]

Location

Bomo_Chr5(-):18516546-18522142      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.442

CDS

ATGCTTGGAAATTTAATTAATATGTATGCAGCTAAATTTTTAATACACCGGCGAAGTCCTGTTTTCTTGTTGAATCGAGTTTCCATTACGACTAAGAAGAAAGTTCATGACCCAAGTGAAGAGGAGCTTTTACCAATATTCCAGTATCCAATAAGCAAAAGTACAGACAGACGAGTCTATGTGTGGGGATTTGCTGAGACAGGTGCTCTGGGTATCCACCTCCCACGTGGCAAGAAAGGGAAAAAAAGTTACAAAAACAACTTCAAATTGGTTTGGCATCCAATGAGGTCTTCTTTTGCAGAGAGATTTGATATAACAAACATAGCCTGTGGCTACGGTTTCACAGTAGCCTCAATAAAAACTTCAGAGCAGCACAAAGTTTTCGGTACCGGTATCAATACAGATTCCCAAATTGGATACCATTCACCACGACGAAATCATCCTTTGGAACTTCTGCTTAGCTATGCACCTATTTATATACCTTACAAGAGCTTGGAGTGTGAGATTAAAGCAGTGGCAGCGGGACGTGCTCACACAATAATCCTGACCGACAAAGAAGGTGTCTATACATTAGGTAACAATGCATATGGTCAGTGCGGTAGGAAAGTAAATGTCAATGAAGAGTATAAAGGTAGTATGGTGACTCATAACATACAAAAGCTTGGAAAGGAAAGCATAATTGATGTATGCTGCGGACAAGATCATAGTCTGTTCATAACAGAGTCTGGTAAAGTGTACGCGTGTGGGTGGGGAGCCGACGGTCAGACCGGACTGGGAAACTATGACAATCGATCCACTCCTACCGCTGTCATAGGCGATATCACCACGGAGAAGATTGTCAAAGTCGCTTCCACTGGAGATTGTGTTTTGGCTTTGAACAACAAAGGAGAACTGTTCGGTTGGGGCAACTCTGAGTACGGGCAGATCCCGATGGCGACGACACAACACCAAGTCAACACGCCCTACGCGCTCCTCAACTTCACCAGGGGACTCGGCAGGATTGTGGACATCGCGGCGGGAGGATCCTTCTGCATGATCGTTAATGACCAAGGAGATGTCTTTGTCTGGGGATTCGGTCTTCTAGGACTTGGACCAAACGTGCAGCACACGGCGACACCTAAACAAATACCACCAACATTGTTTGGCCGAAATGAATTCAACCCTGAGTGTGTGGTTAAAAAAATTTCCTGTGGAATCTCCCATCTCGCAGCTGTCACTAATAATGGTGATCTTTACATGTGGGGCAGGAATAGGCAAGGCTGCCTCGGTTTGGGCAATACAAATGATCAGCATTTTCCCTTAAAAGTGGCGATTGGTGCTCATGTACTTAAAGTGGCTTGTAGTGTGGACCATTCAGTTGCAGTTTGCAAACCGTTTGTTTAG

Protein

MLGNLINMYAAKFLIHRRSPVFLLNRVSITTKKKVHDPSEEELLPIFQYPISKSTDRRVYVWGFAETGALGIHLPRGKKGKKSYKNNFKLVWHPMRSSFAERFDITNIACGYGFTVASIKTSEQHKVFGTGINTDSQIGYHSPRRNHPLELLLSYAPIYIPYKSLECEIKAVAAGRAHTIILTDKEGVYTLGNNAYGQCGRKVNVNEEYKGSMVTHNIQKLGKESIIDVCCGQDHSLFITESGKVYACGWGADGQTGLGNYDNRSTPTAVIGDITTEKIVKVASTGDCVLALNNKGELFGWGNSEYGQIPMATTQHQVNTPYALLNFTRGLGRIVDIAAGGSFCMIVNDQGDVFVWGFGLLGLGPNVQHTATPKQIPPTLFGRNEFNPECVVKKISCGISHLAAVTNNGDLYMWGRNRQGCLGLGNTNDQHFPLKVAIGAHVLKVACSVDHSVAVCKPFV

Uniprot

H9J8F7   A0A212ENZ3   S4PH87   A0A194PQY3   D2X8R8   A0A2W1BC00   + More
A0A2A4JAQ2   A0A2H1VMR4   A0A0N1I5T3   A0A0L7LNA0   A0A2A4J9T2   A0A2J7R604   A0A2J7R611   A0A1B6CZY5   A0A2S2N936   A0A2H8TXL9   A0A067QTU9   A0A1J1IZN3   J9JXQ4   A0A195BCZ7   A0A158P2S5   A0A154PT08   E2BNB3   A0A195F3V8   A0A336KZB7   V5GWG5   F4WM86   E2A0U7   A0A195DCD5   A0A151IGC5   A0A1W4WGP9   A0A151WFB2   A0A336MJM6   A0A3L8D4M8   D6X0Q4   A0A1S4FLW7   U5ESU3   A0A0P6AA68   Q16W91   A0A088A220   A0A0P6HES4   T1J6W7   A0A182HBE5   A0A0L7QV12   E9FVE4   A0A182XYY4   A0A2A3EL98   U4U5N4   A0A182RSQ5   A0A1Y1MDS1   A0A182WJ63   A0A232EYY1   A0A182LV44   W5JAM6   A0A2L2XV68   A0A0C9QEW8   A0A182QQ89   A0A0C9PLF0   K7J5T5   A0A084WND0   A0A0P5TWF7   A0A182NHT3   A0A1Q3F5V5   B0WNR4   A0A182TME3   A0A0A1X4N8   A0A182FF65   A0A182PQD0   A0A182KRF0   A0A182X3N9   A0A182V6J1   A0A182I3D0   A0A182J0Z2   W8AWM0   Q7QJG7   A0A3B3SRX9   A0A0P5UJX4   A0A2R7X1D3   A0A0P5WRU8   A0A1A7Y4S7   A0A0K8WJX5   B4G9K8   A0A0L0C8E6   A0A1W4UPQ9   A0A0P6G548   Q29M85   Q9VPU0   A9UND2   B3N891   A0A0T6BFZ5   A0A0J9QTJ6   A0A0F8B974   A0A3B0K6L4   B4P2Y0   A0A1A8JR10   A0A1A8HV80   A0A1A8CIX2   A0A1A8A6E8   A0A1A8L7J5   A0A034WF35  

Pubmed

19121390    22118469    23622113    26354079    20062520    28756777    + More
26227816    24845553    21347285    20798317    21719571    30249741    18362917    19820115    17510324    26483478    21292972    25244985    23537049    28004739    28648823    20920257    23761445    26561354    20075255    24438588    25830018    20966253    24495485    12364791    14747013    17210077    29240929    17994087    26108605    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    22936249    25835551    17550304    25348373   

EMBL

BABH01027343    BABH01027344    AGBW02013553    OWR43220.1    GAIX01003357    JAA89203.1    + More
KQ459597    KPI95154.1    GU058050    ACY25397.1    KZ150156    PZC72782.1    NWSH01002243    PCG68846.1    ODYU01003405    SOQ42119.1    KQ460970    KPJ10201.1    JTDY01000494    KOB76927.1    PCG68845.1    NEVH01006986    PNF36261.1    PNF36264.1    GEDC01018334    JAS18964.1    GGMR01001046    MBY13665.1    GFXV01007228    MBW19033.1    KK853473    KDR07377.1    CVRI01000064    CRL05544.1    ABLF02004815    KQ976522    KYM82069.1    ADTU01001291    KQ435078    KZC14464.1    GL449385    EFN82875.1    KQ981855    KYN34769.1    UFQS01001153    UFQT01001153    SSX09272.1    SSX29174.1    GALX01003888    JAB64578.1    GL888217    EGI64730.1    GL435626    EFN73000.1    KQ980989    KYN10548.1    KQ977726    KYN00276.1    KQ983219    KYQ46522.1    UFQT01000664    SSX26268.1    QOIP01000013    RLU15415.1    KQ971371    EFA10131.2    GANO01002209    JAB57662.1    GDIP01032651    JAM71064.1    CH477572    EAT38859.1    GDIQ01020933    JAN73804.1    JH431896    JXUM01031872    KQ560938    KXJ80264.1    KQ414735    KOC62306.1    GL732525    EFX89119.1    KZ288215    PBC32583.1    KB631673    ERL85275.1    GEZM01035605    JAV83158.1    NNAY01001572    OXU23555.1    AXCM01000691    ADMH02001806    ETN61051.1    IAAA01007123    IAAA01007124    LAA00036.1    GBYB01001879    JAG71646.1    AXCN02000377    GBYB01001878    JAG71645.1    AAZX01002880    ATLV01024587    KE525352    KFB51724.1    GDIP01123144    JAL80570.1    GFDL01012103    JAV22942.1    DS232014    EDS31905.1    GBXI01008567    JAD05725.1    APCN01000205    GAMC01016078    JAB90477.1    AAAB01008807    EAA04658.3    GDIP01111849    JAL91865.1    KK856311    PTY25471.1    GDIP01082346    JAM21369.1    HADX01002733    SBP24965.1    GDHF01000868    JAI51446.1    CH479180    EDW29038.1    JRES01000753    KNC28713.1    GDIQ01056962    JAN37775.1    CH379060    EAL33809.2    AE014134    AAF51451.1    BT031296    ABY20537.1    CH954177    EDV57278.2    LJIG01000678    KRT86262.1    CM002910    KMY87376.1    KQ041273    KKF28550.1    OUUW01000004    SPP79128.1    CM000157    EDW87187.2    HAEE01002513    SBR22533.1    HAED01001593    SBQ87438.1    HADZ01015733    SBP79674.1    HADY01011778    HAEJ01001256    SBP50263.1    HAEF01003220    SBR40602.1    GAKP01006010    JAC52942.1   

Proteomes

UP000005204    UP000007151    UP000053268    UP000218220    UP000053240    UP000037510    + More
UP000235965    UP000027135    UP000183832    UP000007819    UP000078540    UP000005205    UP000076502    UP000008237    UP000078541    UP000007755    UP000000311    UP000078492    UP000078542    UP000192223    UP000075809    UP000279307    UP000007266    UP000008820    UP000005203    UP000069940    UP000249989    UP000053825    UP000000305    UP000076408    UP000242457    UP000030742    UP000075900    UP000075920    UP000215335    UP000075883    UP000000673    UP000075886    UP000002358    UP000030765    UP000075884    UP000002320    UP000075902    UP000069272    UP000075885    UP000075882    UP000076407    UP000075903    UP000075840    UP000075880    UP000007062    UP000261540    UP000008744    UP000037069    UP000192221    UP000001819    UP000000803    UP000008711    UP000268350    UP000002282   

PRIDE

H9J8F7    Q9VPU0    A9UND2   

Pfam

PF00415   RCC1        + More
PF06248   Zw10

Interpro

IPR000408   Reg_chr_condens        + More
IPR009091   RCC1/BLIP-II       
IPR009361   RZZ-complex_Zw10       
IPR009072   Histone-fold       

SUPFAM

SSF50985   SSF50985        + More
SSF47113   SSF47113       

Gene 3D

2.130.10.30     1.10.20.10    

ProteinModelPortal

H9J8F7   A0A212ENZ3   S4PH87   A0A194PQY3   D2X8R8   A0A2W1BC00   + More
A0A2A4JAQ2   A0A2H1VMR4   A0A0N1I5T3   A0A0L7LNA0   A0A2A4J9T2   A0A2J7R604   A0A2J7R611   A0A1B6CZY5   A0A2S2N936   A0A2H8TXL9   A0A067QTU9   A0A1J1IZN3   J9JXQ4   A0A195BCZ7   A0A158P2S5   A0A154PT08   E2BNB3   A0A195F3V8   A0A336KZB7   V5GWG5   F4WM86   E2A0U7   A0A195DCD5   A0A151IGC5   A0A1W4WGP9   A0A151WFB2   A0A336MJM6   A0A3L8D4M8   D6X0Q4   A0A1S4FLW7   U5ESU3   A0A0P6AA68   Q16W91   A0A088A220   A0A0P6HES4   T1J6W7   A0A182HBE5   A0A0L7QV12   E9FVE4   A0A182XYY4   A0A2A3EL98   U4U5N4   A0A182RSQ5   A0A1Y1MDS1   A0A182WJ63   A0A232EYY1   A0A182LV44   W5JAM6   A0A2L2XV68   A0A0C9QEW8   A0A182QQ89   A0A0C9PLF0   K7J5T5   A0A084WND0   A0A0P5TWF7   A0A182NHT3   A0A1Q3F5V5   B0WNR4   A0A182TME3   A0A0A1X4N8   A0A182FF65   A0A182PQD0   A0A182KRF0   A0A182X3N9   A0A182V6J1   A0A182I3D0   A0A182J0Z2   W8AWM0   Q7QJG7   A0A3B3SRX9   A0A0P5UJX4   A0A2R7X1D3   A0A0P5WRU8   A0A1A7Y4S7   A0A0K8WJX5   B4G9K8   A0A0L0C8E6   A0A1W4UPQ9   A0A0P6G548   Q29M85   Q9VPU0   A9UND2   B3N891   A0A0T6BFZ5   A0A0J9QTJ6   A0A0F8B974   A0A3B0K6L4   B4P2Y0   A0A1A8JR10   A0A1A8HV80   A0A1A8CIX2   A0A1A8A6E8   A0A1A8L7J5   A0A034WF35  

PDB

5XGS     E-value=2.60669e-104,     Score=968

KEGG

101738696    K23495 RCC1-like G exchanging factor-like protein | (RefSeq) Williams-Beuren syndrome chromosomal re

GO

GO:0000278   GO:0000775   GO:0005634   GO:0016021   GO:0016874   GO:0046982  

Length:

460

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.07591

Exp number, first 60 AAs:

0.00804

Total prob of N-in:

0.00513

outside

1  -  460

 

 

Pi

20.401601

Theta

20.361937

Tajima's D

-0.80654

CLR

2.792605

CSRT

0.175841207939603

Interpretation

Uncertain