Gene

KWMTBOMO03106

Pre Gene Modal

BGIBMGA005766

Annotation

putative_cuticle_protein_CPH45_[Operophtera_brumata]

Location

Bomo_Chr5(+):18204841-18206117      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.064 PlasmaMembrane   Reliability : 1.638

CDS

ATGAAATCTGTGATCATCATCGCCGCCTTCGTTGCCGTGGCCATAGCCGCCCCTGCCCCTGGCAAGTACGAGCCCATCTCCGTTGGACCTGCTCTTGTTGACACCTACGAACCCATCTCTGTTGGACCTGCTCTTGTTGACACCTACGTGCCCATCTCTGTTGGACCTGCTCTTGTTGACACCTACGAGCCCATCTCCGTCGGACCTGCTCTTGTTGACACCTACGAGCCCATCTCTGTTGGACCTGCCATTGTTGAAGGTGCCCCTGTGACTGTCACCGGCGCTGATGGCACTCCCCTCGTCCAGATCATCATCAACGTGAACCGTCCTTCCGAGATTGCCGCTGATCCCGTTGATGTTGAGGACATTGCCGAAGAGCCTTTGCCCGAAGTTGTTATTCTCCCCACTCCCGTATTTCCTGAAATCGACGTTCCTGAACCCGTGGAGCTCCCCAGCCCTGTCCTCCCCGAAGTCGTCAAGCCCGTAATTGTTGGTACCCCTATCATCCCGGCTCCCGCTGTCACTCTTCCCGAGACCCTCAACTGA

Protein

MKSVIIIAAFVAVAIAAPAPGKYEPISVGPALVDTYEPISVGPALVDTYVPISVGPALVDTYEPISVGPALVDTYEPISVGPAIVEGAPVTVTGADGTPLVQIIINVNRPSEIAADPVDVEDIAEEPLPEVVILPTPVFPEIDVPEPVELPSPVLPEVVKPVIVGTPIIPAPAVTLPETLN

Uniprot

H9J8C4   H9J3N8   H9J3B7   H9J3B8   I7D6G8   A0A2A4IZ81   + More
A0A2A4IY80   A0A1L2F187   A0A194QYZ0   A0A194QCR7   A0A194QCW3   A0A2H1VK87   A0A2A4J085   D0VEQ1   A0A2A4IZT4   A0A0L7KR74   A0A0N1PFU2   A0A2A4K443   A0A2A4K334   A0A194PNZ3   A0A2A4K3N7   A0A194QE89   A0A2A4K3P9   D0VEP8   D0VEP9   A0A2A4K4U9  

Pubmed

19121390    24801594    26354079    26227816   

EMBL

BABH01027360    KY379951    APS85761.1    BABH01021672    BABH01021671    KY379953    + More
APS85763.1    JX046919    AFO83995.1    NWSH01004670    PCG64786.1    PCG64785.1    KT159929    ANS56427.1    KQ460949    KPJ10504.1    KQ459185    KPJ03262.1    KPJ03259.1    ODYU01002998    SOQ41201.1    PCG64783.1    BABH01021665    GU070725    ACY06935.1    PCG64784.1    JTDY01006902    KOB65605.1    KQ460847    KPJ11967.1    NWSH01000182    PCG78678.1    PCG78671.1    KQ459597    KPI95151.1    PCG78669.1    KPJ03260.1    PCG78679.1    BABH01021664    GU070722    ACY06932.1    GU070723    ACY06933.1    PCG78680.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000037510   

ProteinModelPortal

H9J8C4   H9J3N8   H9J3B7   H9J3B8   I7D6G8   A0A2A4IZ81   + More
A0A2A4IY80   A0A1L2F187   A0A194QYZ0   A0A194QCR7   A0A194QCW3   A0A2H1VK87   A0A2A4J085   D0VEQ1   A0A2A4IZT4   A0A0L7KR74   A0A0N1PFU2   A0A2A4K443   A0A2A4K334   A0A194PNZ3   A0A2A4K3N7   A0A194QE89   A0A2A4K3P9   D0VEP8   D0VEP9   A0A2A4K4U9  

KEGG

101739114    no KO assigned | (RefSeq) actin cytoskeleton-regulatory complex protein PAN1-like

GO

SignalP

Position:   1 - 16,         Likelihood:  0.995269

 

 

Length:

181

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.79694

Exp number, first 60 AAs:

2.78479

Total prob of N-in:

0.17605

outside

1  -  181

 

 

Pi

1.392353

Theta

4.146044

Tajima's D

-1.447297

CLR

1.28272

CSRT

0.0580970951452427

Interpretation

Uncertain