Gene

KWMTBOMO03104

Pre Gene Modal

BGIBMGA005764

Annotation

PREDICTED:_armadillo_repeat-containing_protein_3_[Papilio_xuthus]

Location

Bomo_Chr5(+):18128111-18135385      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.074 Nuclear   Reliability : 1.142 PlasmaMembrane   Reliability : 1.246

CDS

ATGTCAGTCAAGGACAACCCGATAGAAGCTCAGCGTTTGGCGGTACAGTGCTACATAAATCTCCAGAATTATCACGTTAGCACAAGAGCCATGCTTAGCCCGGACTTCGTACTAGAACTTGTGAATATATTGGAGCGCATCGACATCAGATTGAAAATATTGACGTGTACGGCACTTACGGGTCTTATGTCAGAAGATCTTGCCAAAGACTTGTTCACGCTGAAGAAAGGTGAAGAGGTCGTGTCAAATAACCTTCGTATTGAACATGTGGGCTTCCGAACAGCGCTCTGCATTCTGATCACGTCCAGCGTTACTGACGAAGGAGCCGAAATATATTTACAACTAGGAACTTTGCACTACATGATTGAAAACAAAGCGGCTCGGTATGTGGTGGGCGCGTGGGAGCCCGCCATCGAAGCTATATTCCGACACCATCCTTCAGCGAAGTTCGCTTACACCGGCACCCTGGATATCAATGACTTTACTCAGGAAGGTTTCTACGTCCTCAAACGACTCACCAAACGATTCCCGACCATCCAAGAGGTGTTGCTGCAGAAGCCTCCGCCTCGGGATCCTGTGCTCATCGCCATGTTCCTCCACCCTCAGTCGGACGGAAATTCCTCAATGGACATACGGATGCCTTATCAGCGGTCGAGTTCCAAGCTCGCTGTTTCACCATCAAGCGGTTTGTTTGCATCCTTCCTACCTGATGACGTCAATTTGAGGTCGTATTTGCTGAAACTACGGCTGTGGTTTGGGGATCCAGCAAAATCACTTCACTACATCGAAATAGAAGATGCTCATTATGAAGTGAGGTATCGGGATAAATGCGCTGAAGTGAGTTCGTCGCTGAAGCAGCGCGCTCAGTTGCTCGCGGAGTTTGTGGTCCAGCAGATGAGCGGCCTCACCCAGGAGCGAGACTGCTCTATGCCCAGCGTTGAGCTACACCTCGCCGATCTGATGGTACTGTTGTTTATTGCAACGCCCATGCGATGTGAAGTAGTGGGAGTATATTAA

Protein

MSVKDNPIEAQRLAVQCYINLQNYHVSTRAMLSPDFVLELVNILERIDIRLKILTCTALTGLMSEDLAKDLFTLKKGEEVVSNNLRIEHVGFRTALCILITSSVTDEGAEIYLQLGTLHYMIENKAARYVVGAWEPAIEAIFRHHPSAKFAYTGTLDINDFTQEGFYVLKRLTKRFPTIQEVLLQKPPPRDPVLIAMFLHPQSDGNSSMDIRMPYQRSSSKLAVSPSSGLFASFLPDDVNLRSYLLKLRLWFGDPAKSLHYIEIEDAHYEVRYRDKCAEVSSSLKQRAQLLAEFVVQQMSGLTQERDCSMPSVELHLADLMVLLFIATPMRCEVVGVY

Similarity

Belongs to the OXA1/ALB3/YidC family.

Uniprot

A0A2A4JTC2   A0A212EHH1   A0A2H1VH36   A0A194PQX8   A0A2A3ELF6   A0A088A212   + More
A0A1B6LGZ6   A0A1B6JQ45   A0A026WFM2   A0A3L8DJX4   A0A1B6E1R8   A0A1B6FTZ8   A0A1B6DW80   A0A0M9AA50   A0A195FVD0   B3MDD8   A0A195BK56   F4X2S2   A0A158NLV1   B4P4V0   A0A0M5IX56   A0A1W4VRX2   B3NRR6   A0A232FFR1   Q7JYM7   A0A1A9YPF5   A0A151WK63   B4MPB8   A0A1B0BZ58   B4HQ04   A0A0J9RBK0   B4QDY0   A0A1A9UIX3   A0A1A9WP26   A0A0K8UWQ3   A0A0A1XNE3   A0A3B0JG91   A0A034VHV5   Q290W5   B4GB52   A0A1I8ND71  

Pubmed

22118469    26354079    24508170    30249741    17994087    21719571    + More
21347285    17550304    28648823    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    25830018    25348373    15632085    25315136   

EMBL

NWSH01000650    PCG75026.1    AGBW02014879    OWR40943.1    ODYU01002528    SOQ40138.1    + More
KQ459597    KPI95149.1    KZ288215    PBC32595.1    GEBQ01017069    JAT22908.1    GECU01006355    JAT01352.1    KK107238    EZA54728.1    QOIP01000007    RLU20744.1    GEDC01005422    JAS31876.1    GECZ01016089    JAS53680.1    GEDC01007354    JAS29944.1    KQ435716    KOX79073.1    KQ981219    KYN44418.1    CH902619    EDV36386.1    KQ976450    KYM85668.1    GL888591    EGI59268.1    ADTU01019672    CM000158    EDW90671.1    CP012524    ALC40798.1    CH954179    EDV56218.1    NNAY01000278    OXU29542.1    AE013599    AY075330    AAF58426.1    AAL68197.1    KQ983020    KYQ48197.1    CH963849    EDW73957.1    JXJN01017547    JXJN01022979    CH480816    EDW47667.1    CM002911    KMY93397.1    CM000362    EDX06874.1    GDHF01021559    JAI30755.1    GBXI01002189    JAD12103.1    OUUW01000001    SPP74370.1    GAKP01017597    JAC41355.1    CM000071    EAL25247.1    CH479181    EDW32154.1   

Proteomes

UP000218220    UP000007151    UP000053268    UP000242457    UP000005203    UP000053097    + More
UP000279307    UP000053105    UP000078541    UP000007801    UP000078540    UP000007755    UP000005205    UP000002282    UP000092553    UP000192221    UP000008711    UP000215335    UP000000803    UP000092443    UP000075809    UP000007798    UP000092460    UP000001292    UP000000304    UP000078200    UP000091820    UP000268350    UP000001819    UP000008744    UP000095301   

PRIDE

Q7JYM7   

Pfam

PF00514   Arm        + More
PF03224   V-ATPase_H_N
PF02096   60KD_IMP

Interpro

IPR011989   ARM-like        + More
IPR016024   ARM-type_fold       
IPR000225   Armadillo       
IPR004908   ATPase_V1-cplx_hsu       
IPR001708   YidC/ALB3/OXA1/COX18       
IPR028055   Membr_insert_YidC/Oxa1_C       

SUPFAM

SSF48371   SSF48371       

Gene 3D

1.25.10.10    

ProteinModelPortal

A0A2A4JTC2   A0A212EHH1   A0A2H1VH36   A0A194PQX8   A0A2A3ELF6   A0A088A212   + More
A0A1B6LGZ6   A0A1B6JQ45   A0A026WFM2   A0A3L8DJX4   A0A1B6E1R8   A0A1B6FTZ8   A0A1B6DW80   A0A0M9AA50   A0A195FVD0   B3MDD8   A0A195BK56   F4X2S2   A0A158NLV1   B4P4V0   A0A0M5IX56   A0A1W4VRX2   B3NRR6   A0A232FFR1   Q7JYM7   A0A1A9YPF5   A0A151WK63   B4MPB8   A0A1B0BZ58   B4HQ04   A0A0J9RBK0   B4QDY0   A0A1A9UIX3   A0A1A9WP26   A0A0K8UWQ3   A0A0A1XNE3   A0A3B0JG91   A0A034VHV5   Q290W5   B4GB52   A0A1I8ND71  

KEGG

101739391    no KO assigned | (RefSeq) armadillo repeat-containing protein 3

GO

GO:0032977   GO:0016021  

PANTHER

PTHR12428  

Subcellular location

Membrane  

Length:

338

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.13118

Exp number, first 60 AAs:

0.00601

Total prob of N-in:

0.01998

outside

1  -  338

 

 

Pi

28.882226

Theta

27.088296

Tajima's D

0.063346

CLR

1.385351

CSRT

0.389230538473076

Interpretation

Uncertain