SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03099
Pre Gene Modal
BGIBMGA005807
Annotation
PREDICTED:_oxysterol-binding_protein-related_protein_2_[Bombyx_mori]
Full name
Oxysterol-binding protein      
Location in the cell
Cytoplasmic   Reliability : 1.652 Mitochondrial   Reliability : 1.372
 

Sequence

CDS
ATGGAAAATGAACTCAAGCTTCACAGATACAGGACAACACTACCAGTGGCCCAATTCAGCCGAGGAGACTTCTCGCTCTGGTCGGTGCTAAAAAACTGCGTCGGCAAAGAGTTATCCAAGATCACGATGCCGGTGGTATTTAATGAGCCTCTGTCGTTCTTGCAACGGATGCTGGAGTACTTGGAGTACGCGCATCTGCTGCGGATGGCTTCGGAACAGACCGATCCTGTGGCTAGGATGGAGCATATAGCAGCGTTTGCCGTAAGTGCTCTGGCTTCAAACTGGGAACGTCTCGGCAAGCCGTTCAATCCTCTCCTGGGAGAGACATACGAACTTGAGCGTCCAGAGTTCAGAGCTGTCTGTGAACAGGTGTCTCACCACCCTCCAGTGTCAGCGTTCCACGCGGACAGCCAGCATTTCGTATTCCACGGCTCTGTTCATCCGAAACTGAAGTTCTGCGGGAAGAGTGTCGAGATTCAACCAAAAGGACACGTCACTGTTGAATTGCCGAGGTGGGGTGAGGCATACACATGGAGCAATGTAAACTGCGTGGTCCACAATGTGATTGTGGGCAAGCTATGGATCGAGCAGTACGGGGCTATGGAGGTCACCTGCCACGGAGGGTCTGGTCTGAAGGCTAACCTAGTGTTCAAGCCAGCCGGATTCAATAACAGGGACCTGCATCGGGTCGACGGATTCATTACAGATTCTAGCAAACGTCGTCTCCGGTTCTTGTACGGCAAATGGACGGAGTACATCAAGTGTTGCAGCGCGGCAGCCCACGAGCAGTGGTCCAGGGAGCGCGGAGACGAGGGTCCTGCCCACACCACTCCTTCGCATACTCCCAAAAAAGTCCTCGCCAAACTGAACAGCTTCAAAGTGGGCGCTTTGCGATCCATGTCCATACAAGAGCCTGAAGAACCGGATCCGAATGCGGAAGAAGTTCCGAAGCCGGATGACTCTTTCAACATCGACATCCCAGGGTCAGTCACGCTTTGGGAAGCCAGGTCTCGACCGCCTAATAGTGCTCAGTACTATCAGTTCACTGAGTTCGCAATGTCCCTAAACGAGCTAGAGCCCGGGATGAAGGGTCAGCTTTGCCCGACCGACAGCCGTCTCAGACCTGATATCAGGTTGCTGGAGCAGGGCGACATTGACGCGGCAGCTGCGGAGAAAACCAGGCTTGAAGAGAAACAGAGGACTGCGAGGAAGATCCTCAAGAAATCTGCTGATGGTTGGCAACCTAGGTGGTTCAGCCAAGGCACGAATCCGTACACGAAGCAAGAAGACTGGCTCTACAACGGTGGATATTGGGATCGCAATTATCAACATTTGAAGGATGTTGATATATTCTGA
Protein
MENELKLHRYRTTLPVAQFSRGDFSLWSVLKNCVGKELSKITMPVVFNEPLSFLQRMLEYLEYAHLLRMASEQTDPVARMEHIAAFAVSALASNWERLGKPFNPLLGETYELERPEFRAVCEQVSHHPPVSAFHADSQHFVFHGSVHPKLKFCGKSVEIQPKGHVTVELPRWGEAYTWSNVNCVVHNVIVGKLWIEQYGAMEVTCHGGSGLKANLVFKPAGFNNRDLHRVDGFITDSSKRRLRFLYGKWTEYIKCCSAAAHEQWSRERGDEGPAHTTPSHTPKKVLAKLNSFKVGALRSMSIQEPEEPDPNAEEVPKPDDSFNIDIPGSVTLWEARSRPPNSAQYYQFTEFAMSLNELEPGMKGQLCPTDSRLRPDIRLLEQGDIDAAAAEKTRLEEKQRTARKILKKSADGWQPRWFSQGTNPYTKQEDWLYNGGYWDRNYQHLKDVDIF

Summary

Similarity
Belongs to the OSBP family.
EMBL
BABH01027371    AGBW02014879    OWR40947.1    ODYU01003283    SOQ41840.1    KQ460847    + More
KPJ11974.1    KQ459597    KPI95144.1    NWSH01000650    PCG75020.1    NEVH01006721    PNF37298.1    GECZ01022660    JAS47109.1    GECU01013592    GECU01000220    JAS94114.1    JAT07487.1    GEBQ01014469    JAT25508.1    AXCN02000897    GDHC01008932    JAQ09697.1    AXCM01002169    APCN01000224    CH477833    EAT35818.1    PYGN01001376    PSN35281.1    DS235833    EEB18143.1    GECL01001712    JAP04412.1    AAAB01008807    EAA04558.5    ADMH02000483    ETN66265.1    GDHC01019239    JAP99389.1    JXUM01020530    JXUM01020531    KQ560574    KXJ81851.1    GBRD01012602    JAG53222.1    GDHC01004027    JAQ14602.1    ATLV01012360    KE524785    KFB36555.1    DS232396    EDS41075.1    KQ971307    EFA11513.2    AJVK01027003    GBRD01012601    JAG53223.1    JTDY01001717    KOB73092.1    GEZM01068781    JAV66774.1    GDRN01109576    JAI57058.1    ACPB03005046    KB632399    ERL94716.1    NNAY01000639    OXU27248.1    AJWK01017924    AJWK01017925    GFDF01002442    JAV11642.1    AE013599    AY095008    AAF47130.1    AAM11336.1    CM000362    CM002911    EDX08482.1    KMY96205.1    CH954179    EDV56920.1    APGK01039075    KB740967    ENN76797.1    OUUW01000001    SPP73203.1    CH902619    EDV36283.1    AHN56597.1    CM000158    EDW92450.1    KQS63094.1    CM000071    EAL25447.2    KRT02227.1    CH963849    EDW74474.1    CH479181    EDW32448.1    CH480824    EDW57065.1    KK107238    QOIP01000007    EZA54808.1    RLU20486.1    GL446405    EFN87825.1    JR040019    AEY58952.1    KZ288307    PBC28758.1    ADTU01020484    JR040018    AEY58951.1    GL888172    EGI66135.1    CH933808    EDW09778.1    KQ977231    KYN04750.1    GFPF01010397    MAA21543.1    GEDV01011485    JAP77072.1    KQ980710    KYN14449.1    GEFH01002298    JAP66283.1    KQ976697    KYM77551.1    KQ982601    KYQ54013.1    KQ981676    KYN38157.1    KQ434786    KZC05200.1    GANP01002119    JAB82349.1    GL444238    EFN61150.1    GACK01004941    JAA60093.1    GBBK01002339    JAC22143.1    GL766755    EFZ14706.1    JO841050    AEO32667.1    GBBM01000979    JAC34439.1    GBBM01003719    JAC31699.1    GBYB01013533    JAG83300.1    GFAC01005434    JAT93754.1    GBYB01014360    JAG84127.1    GFPF01010396    MAA21542.1    GEDV01003488    JAP85069.1    GANP01009545    JAB74923.1   
Pfam
PF01237   Oxysterol_BP        + More
PF12796   Ank_2
PF00023   Ank
Interpro
IPR037239   OSBP_sf        + More
IPR000648   Oxysterol-bd       
IPR018494   Oxysterol-bd_CS       
IPR020683   Ankyrin_rpt-contain_dom       
IPR036770   Ankyrin_rpt-contain_sf       
IPR011993   PH-like_dom_sf       
IPR002110   Ankyrin_rpt       
IPR001849   PH_domain       
SUPFAM
SSF144000   SSF144000        + More
SSF48403   SSF48403       
Gene 3D
PDB
5ZM7     E-value=6.26494e-126,     Score=1155

Ontologies

Topology

Length:
451
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00564999999999999
Exp number, first 60 AAs:
0.0011
Total prob of N-in:
0.00590
outside
1  -  451
 
 

Population Genetic Test Statistics

Pi
24.098974
Theta
22.716172
Tajima's D
0.051195
CLR
1.782873
CSRT
0.389480525973701
Interpretation
Uncertain
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