Gene

KWMTBOMO03097

Pre Gene Modal

BGIBMGA005763

Annotation

PREDICTED:_17-beta-hydroxysteroid_dehydrogenase_13-like_[Amyelois_transitella]

Location

Bomo_Chr5(+):18001451-18048605      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.791 PlasmaMembrane   Reliability : 1.807

CDS

ATGGCGTCGGAACTAAGAACAGAAAAGGGGTCTTCTAATGGATTGACGGATAAAGCTCCCTGGACTGATGAGCAAGGCATAGTGATGAAGGTGTACCAAGCAGTGATGCTGACTCTGGAGATCGTGACCCTCTATATCAAGATGGTTCTCACCTGGTTCCATGCTATGTACCTGCTGGTAGTGCCCCCCGAGCCGAAGAGTGTCAATGGAGAGATTATCCTTATTACCGGCACAGGCCACGGCATGGGTAGGGAGACAGCGATGAGGTTTGCCAAGCTCGGAGGCGTGATAGTCTGTGTGGATATCAACCAGAAAACCAATCAGGAGACCGTGGACCTCATCAAGGAGCAGAAAGGAAAAGCGTATCGGTTCGAATGTGACGTCACAGACAGCGAGGCAGTGAAGGCTCTGGCCGAGAAGATCCGTCGTGAAGTAGGCGACGTTACCATGCTGGTGAACAACGCCGGCATCATGCCGTGCAAGCCGCTGCTGCAGCATGGGGAGGGGGAGATCAGGGCCGCCTTCAATGTCAATGTCATGGCTCATCTGTGGTTGATCCAAGCATTCCTACCCTCTATGATGGAGCGAAACCACGGTCACATCGTGGCGATGTCTTCGATGGCCGGTGTCCTTGGACTACGGAATTTAGTTCCATATTGCGCCACCAAGTTCGCTGTCAGAGGGCTAATGGAAGCGCTGCACGAAGAGTTAAGGGAGGACACGAGAGATTTCAGTGGCATCAAATTCACGGTGATCTGCCCGTACATAGTGGACACGGGACTGTGCAAGAACCCCAAGATCAAGTTCCCGTCGATGATGAAGATCCTGACGCCTGAAGAAGCTTCCGACTGCATCGTGGACGCGGTCCGGAGGAACTACTACGAGATCAGCATACCGACGTCGCTCTTATACGTCAACACTTTTTGCCGTCTATTGCCGAGGTCTGTGTCCTCGCATTTGAAGGATTTTTTGGATTCAGGACTTGAGGCACAGTAA

Protein

MASELRTEKGSSNGLTDKAPWTDEQGIVMKVYQAVMLTLEIVTLYIKMVLTWFHAMYLLVVPPEPKSVNGEIILITGTGHGMGRETAMRFAKLGGVIVCVDINQKTNQETVDLIKEQKGKAYRFECDVTDSEAVKALAEKIRREVGDVTMLVNNAGIMPCKPLLQHGEGEIRAAFNVNVMAHLWLIQAFLPSMMERNHGHIVAMSSMAGVLGLRNLVPYCATKFAVRGLMEALHEELREDTRDFSGIKFTVICPYIVDTGLCKNPKIKFPSMMKILTPEEASDCIVDAVRRNYYEISIPTSLLYVNTFCRLLPRSVSSHLKDFLDSGLEAQ

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9J8C1   S4PKB0   A0A0N1PHH5   A0A212EHJ0   A0A2H1WWL5   H9J8G6   + More
A0A212EHH8   A0A2A4K3Z4   A0A084VNW2   A0A0N1IP16   A0A2C9GPE1   Q7PRW2   A0A2H1VJQ9   A0A1Q3G5K6   A0A1B6C109   W5JLV1   B0WZ23   A0A1Q3FQL1   A0A182PSU8   A0A182RHK9   A0A182L878   A0A182QFY3   A0A182MHI6   A0A182TE30   A0A182YH69   A0A067QTW2   A0A182N8G2   A0A182W5M3   A0A182XBY7   A0A182UQG1   A0A1L8DKW9   A0A182IZ06   A0A1B6H6B3   A0A2J7PVM3   A0A1B6MJ99   A0A195D3V5   A0A2A4K4B3   A0A1B6GXZ2   A0A182FIS9   K7IU30   A0A224XGH6   Q16ZY5   A0A023EPJ1   E2C4N5   A0A0V0G980   F4W5L6   A0A0N7Z933   A0A158NSD4   A0A0L7QV45   A0A026WJP8   T1IBK9   A0A1B6D4X1   A0A161MZK5   A0A182GVC9   A0A023F371   A0A0P6J5T2   A0A023EPC0   B4NEJ5   A0A023EQF5   A0A146MDQ4   A0A182MN21   A0A146KSE4   A0A0K8T673   W8CBT6   F5HJM5   A0A2C9GPL9   A0A0A9XL74   Q9VKB8   A0A1W4VAZ0   B4P1Y1   A0A023ERM3   B3N3X7   A0A0J9R152   A0A336LVA3   B0WZ24   A0A0C9PL38   A0A034WN98   Q5BID6   A0A1Q3FII8   A0A182TBP2   E0W476   A0A0A1WXB0   A0A034WKG7   B4L823   A0A0K8VRM3   A0A2M4CXL7   A0A1I8PPZ8   D3TRJ0   B4N7A2   B3MVI2   A0A2M4BUP4   A0A2M4CXM9   A0A0K8UQP6   A0A2M3Z8X6   A0A0K8UNJ4   A0A1B0EX60   A0A1B0BV62   A0A1A9XFP3  

Pubmed

19121390    23622113    26354079    22118469    24438588    12364791    + More
14747013    17210077    20920257    23761445    20966253    25244985    24845553    20075255    17510324    24945155    20798317    21719571    27129103    21347285    24508170    30249741    26483478    25474469    26999592    17994087    26823975    24495485    25401762    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    22936249    25348373    20566863    25830018    20353571    18057021   

EMBL

BABH01027372    BABH01027373    BABH01027374    BABH01027375    BABH01027376    GAIX01004600    + More
JAA87960.1    KQ460847    KPJ11975.1    AGBW02014879    OWR40948.1    ODYU01011214    SOQ56814.1    BABH01027377    AGBW02014880    OWR40937.1    NWSH01000175    PCG78746.1    ATLV01014931    KE524996    KFB39656.1    KPJ11976.1    APCN01001259    AAAB01008846    EAA06477.6    ODYU01002942    SOQ41079.1    GEYN01000189    JAV44800.1    GEDC01030244    GEDC01008499    JAS07054.1    JAS28799.1    ADMH02001200    ETN63754.1    DS232203    EDS37337.1    GFDL01005134    JAV29911.1    AXCN02002226    AXCM01002712    KK853021    KDR12387.1    GFDF01007094    JAV06990.1    GECU01037505    JAS70201.1    NEVH01020948    PNF20383.1    GEBQ01029339    GEBQ01024795    GEBQ01017340    GEBQ01003983    JAT10638.1    JAT15182.1    JAT22637.1    JAT35994.1    KQ976881    KYN07572.1    PCG78748.1    GECZ01002473    JAS67296.1    AAZX01011807    GFTR01004841    JAW11585.1    CH477480    EAT40239.1    GAPW01002186    JAC11412.1    GL452536    EFN77115.1    GECL01001744    JAP04380.1    GL887655    EGI70513.1    GDKW01001667    JAI54928.1    ADTU01024832    KQ414727    KOC62508.1    KK107167    QOIP01000010    EZA56272.1    RLU17457.1    ACPB03013753    GEDC01016578    GEDC01000925    JAS20720.1    JAS36373.1    GEMB01003343    JAR99871.1    JXUM01002260    JXUM01002261    KQ560135    KXJ84250.1    GBBI01003106    JAC15606.1    GDUN01000390    JAN95529.1    JXUM01020073    GAPW01002759    GAPW01002758    KQ560563    JAC10840.1    KXJ81885.1    CH964239    EDW82164.2    GAPW01002794    JAC10804.1    GDHC01001477    JAQ17152.1    GDHC01020487    JAP98141.1    GBRD01004802    GBRD01004801    JAG61019.1    GAMC01004536    JAC02020.1    EGK96486.1    GBHO01023203    JAG20401.1    AE014134    BT133278    AAF53158.3    AFC38909.1    AFH03671.1    AHN54381.1    CM000157    EDW88152.2    KRJ97607.1    GAPW01002264    JAC11334.1    CH954177    EDV58829.2    CM002910    KMY89871.1    UFQT01000115    SSX20267.1    EDS37338.1    GBYB01001718    JAG71485.1    GAKP01003317    JAC55635.1    BT021288    AAX33436.1    GFDL01007752    JAV27293.1    DS235886    EEB20432.1    GBXI01011234    GBXI01011183    JAD03058.1    JAD03109.1    GAKP01004709    JAC54243.1    CH933814    EDW05598.2    GDHF01010787    JAI41527.1    GGFL01005898    MBW70076.1    EZ424042    ADD20318.1    CH964182    EDW80243.2    CH902624    EDV33247.2    KPU74364.1    GGFJ01007646    MBW56787.1    GGFL01005899    MBW70077.1    GDHF01028530    GDHF01023295    GDHF01003485    JAI23784.1    JAI29019.1    JAI48829.1    GGFM01004127    MBW24878.1    GDHF01024226    GDHF01012080    JAI28088.1    JAI40234.1    AJVK01000821    JXJN01021143   

Proteomes

UP000005204    UP000053240    UP000007151    UP000218220    UP000030765    UP000075840    + More
UP000007062    UP000000673    UP000002320    UP000075885    UP000075900    UP000075882    UP000075886    UP000075883    UP000075902    UP000076408    UP000027135    UP000075884    UP000075920    UP000076407    UP000075903    UP000075880    UP000235965    UP000078542    UP000069272    UP000002358    UP000008820    UP000008237    UP000007755    UP000005205    UP000053825    UP000053097    UP000279307    UP000015103    UP000069940    UP000249989    UP000007798    UP000000803    UP000192221    UP000002282    UP000008711    UP000075901    UP000009046    UP000009192    UP000095300    UP000007801    UP000092462    UP000092460    UP000092443   

PRIDE

H9J8C1    H9J8G6    Q9VKB8    Q5BID6   

Pfam

PF00106   adh_short        + More
PF05497   Destabilase

Interpro

IPR020904   Sc_DH/Rdtase_CS        + More
IPR002347   SDR_fam       
IPR036291   NAD(P)-bd_dom_sf       
IPR008597   Invert_lysozyme       
IPR018000   Neurotransmitter_ion_chnl_CS       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

H9J8C1   S4PKB0   A0A0N1PHH5   A0A212EHJ0   A0A2H1WWL5   H9J8G6   + More
A0A212EHH8   A0A2A4K3Z4   A0A084VNW2   A0A0N1IP16   A0A2C9GPE1   Q7PRW2   A0A2H1VJQ9   A0A1Q3G5K6   A0A1B6C109   W5JLV1   B0WZ23   A0A1Q3FQL1   A0A182PSU8   A0A182RHK9   A0A182L878   A0A182QFY3   A0A182MHI6   A0A182TE30   A0A182YH69   A0A067QTW2   A0A182N8G2   A0A182W5M3   A0A182XBY7   A0A182UQG1   A0A1L8DKW9   A0A182IZ06   A0A1B6H6B3   A0A2J7PVM3   A0A1B6MJ99   A0A195D3V5   A0A2A4K4B3   A0A1B6GXZ2   A0A182FIS9   K7IU30   A0A224XGH6   Q16ZY5   A0A023EPJ1   E2C4N5   A0A0V0G980   F4W5L6   A0A0N7Z933   A0A158NSD4   A0A0L7QV45   A0A026WJP8   T1IBK9   A0A1B6D4X1   A0A161MZK5   A0A182GVC9   A0A023F371   A0A0P6J5T2   A0A023EPC0   B4NEJ5   A0A023EQF5   A0A146MDQ4   A0A182MN21   A0A146KSE4   A0A0K8T673   W8CBT6   F5HJM5   A0A2C9GPL9   A0A0A9XL74   Q9VKB8   A0A1W4VAZ0   B4P1Y1   A0A023ERM3   B3N3X7   A0A0J9R152   A0A336LVA3   B0WZ24   A0A0C9PL38   A0A034WN98   Q5BID6   A0A1Q3FII8   A0A182TBP2   E0W476   A0A0A1WXB0   A0A034WKG7   B4L823   A0A0K8VRM3   A0A2M4CXL7   A0A1I8PPZ8   D3TRJ0   B4N7A2   B3MVI2   A0A2M4BUP4   A0A2M4CXM9   A0A0K8UQP6   A0A2M3Z8X6   A0A0K8UNJ4   A0A1B0EX60   A0A1B0BV62   A0A1A9XFP3  

PDB

1YB1     E-value=5.93399e-49,     Score=489

KEGG

101739674    no KO assigned | (RefSeq) short-chain dehydrogenase/reductase family 16C member 6-like

GO

GO:0016021   GO:0016491   GO:0005811   GO:0003796   GO:0005783   GO:0016229   GO:0019509   GO:0010309   GO:0016020   GO:0008237   GO:0051103   GO:0003677   GO:0006281   GO:0048384  

Length:

331

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

19.58173

Exp number, first 60 AAs:

17.66868

Total prob of N-in:

0.78543

POSSIBLE N-term signal

sequence

outside

1  -  331

 

 

Pi

22.389987

Theta

23.206224

Tajima's D

-1.137943

CLR

1.331531

CSRT

0.111694415279236

Interpretation

Uncertain