Gene

KWMTBOMO03095

Pre Gene Modal

BGIBMGA005762

Annotation

PREDICTED:_EF-hand_calcium-binding_domain-containing_protein_1_[Bombyx_mori]

Location

Bomo_Chr5(+):17976931-17978702      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.077

CDS

ATGCACAATACATTTGATCTGGTCACCGAAGAGACTATACTCGAACGGATTTGGGTGACTTGGGAACGAGGAGCCAACGGCGGCGAGGGGGCCCTTAAATTCGAGGCTTGGGTAAAAGGCCTCAGCGTCTTACTGCGCGGAAACAACGAAGAACGACTGGCTTTGTGCTTCAGAGTCTACGACTTAAATTACGATGGGTTCATCACTAAGGACGAGATGTTTGTATTGCTGAAAAACTCACTCATGAAGCAACCAGGAGATGAAGACCCGGACGAAGGGGTAAGAGACTTAGTAGAATTGGTTCTAAGGAAGATGGATATCGATAAAGATGGGAAAGTTTCTCTCGATGATTACAGAGATGCAGTACAACAAGAGCCGCTACTGTTAGAAGCGTTTGGGCAATGTCTACCTTCAAAAAGGCACATAGCGGTTTTCCTTAAGAATTTGGTTTCGAAAACGTAG

Protein

MHNTFDLVTEETILERIWVTWERGANGGEGALKFEAWVKGLSVLLRGNNEERLALCFRVYDLNYDGFITKDEMFVLLKNSLMKQPGDEDPDEGVRDLVELVLRKMDIDKDGKVSLDDYRDAVQQEPLLLEAFGQCLPSKRHIAVFLKNLVSKT

Uniprot

H9J8C0   A0A2A4K4B0   A0A212EHI0   A0A2H1VJT0   A0A0N1IGE5   A0A194PNY3   + More
A0A182L821   A0A182TPR4   A0A182IAK0   A0A182V3Y6   A0NCH4   A0A182QAK9   A0A182M2S3   Q16ZY6   A0A182T0J7   A0A182YH68   A0A182N8G1   A0A182XBY6   A0A182GXA2   A0A1S4FID1   A0A336LUW0   A0A182FIT0   A0A182RHK8   A0A1B0CG93   A0A084VNW3   A0A1I8PGQ2   A0A0L0C825   A0A182J4M9   A0A0A1X6S6   A0A0C9QEZ1   A0A1B0BVF0   A0A182W5M2   A0A182WA36   A0A1A9WDA8   A0A0C9R1Q9   A0A1I8MVS3   B4MAT9   A0A1A9Y619   B0WZ25   B4NEJ6   A0A034WKV2   A0A2J7PVM5   B4JMD2   A0A0M4F8D8   Q1EC98   Q9W3K8   A0A1A9VDK8   A0A1W4VHZ5   B3NY15   W8CDM0   B4IKW2   Q29IP4   A0A3B0J6S4   B4H2T7   A0A1B0F9J9   A0A3L8DMD4   A0A026WDW1   A0A0K8W0W1   E2A202   B3MRJ8   B4Q0N2   A0A182PSU7   A0A2P8XB94   A0A1B6I8K2   E2C8Y1   A0A0L7QRU4   A0A1B0DM81   A0A139WPA7   A0A151J8V2   A0A151INX9   A0A0T6B4D5   A0A310SKN6   A0A2A3ER24   A0A158NUH1   A0A1J1HP21   A0A1S3D0W1   K7J8P5   A0A195BU40   E9J932   A0A195FXW8   A0A0A9YJ23   A0A151WFX7   A0A087ZUV7   E0W478   A0A154PP59   A0A2R7WH60   R4G3M2   T1HY54   T2M555   A0A3P8TC42   A0A3M7SBK5   A0A1W4WRE0   A0A0L8GPY8   A0A3P8TAR7   A0A3L7HQ55   A0A2S2NEW4   A0A2H8TVC9   Q28D49   B0BLS4   X1WIN2  

Pubmed

19121390    22118469    26354079    20966253    12364791    14747013    + More
17210077    17510324    25244985    26483478    24438588    26108605    25830018    25315136    17994087    25348373    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    24495485    15632085    30249741    24508170    20798317    17550304    29403074    18362917    19820115    21347285    20075255    21282665    25401762    26823975    20566863    24065732    30375419    29704459    20431018   

EMBL

BABH01027377    NWSH01000175    PCG78744.1    AGBW02014880    OWR40938.1    ODYU01002942    + More
SOQ41078.1    KQ460847    KPJ11977.1    KQ459597    KPI95141.1    APCN01001259    AAAB01008846    EAU77297.2    AXCN02002153    AXCM01005054    CH477480    EAT40238.1    JXUM01020053    KQ560563    KXJ81884.1    UFQS01004716    UFQT01000207    UFQT01004716    SSX16561.1    SSX21724.1    AJWK01010863    ATLV01014931    KE524996    KFB39657.1    JRES01000777    KNC28411.1    GBXI01007500    JAD06792.1    GBYB01001923    GBYB01001924    JAG71690.1    JAG71691.1    JXJN01021265    GBYB01001925    JAG71692.1    CH940655    EDW66348.2    DS232203    EDS37339.1    CH964239    EDW82165.1    GAKP01003950    JAC55002.1    NEVH01020948    PNF20379.1    CH916371    EDV91893.1    CP012528    ALC48625.1    BT025836    ABF85736.1    AE014298    AAF46317.3    CH954180    EDV47536.2    GAMC01001711    JAC04845.1    CH480859    EDW52733.1    CH379063    EAL32609.3    OUUW01000003    SPP77884.1    CH479204    EDW30654.1    CCAG010020064    QOIP01000006    RLU21605.1    KK107256    EZA54290.1    GDHF01007598    JAI44716.1    GL435878    EFN72544.1    CH902622    EDV34403.2    CM000162    EDX02303.2    PYGN01004997    PSN29250.1    GECU01024493    JAS83213.1    GL453744    EFN75599.1    KQ414768    KOC61355.1    AJVK01006890    KQ971307    KYB29772.1    KQ979507    KYN21175.1    KQ976899    KYN07173.1    LJIG01016060    KRT81735.1    KQ765174    OAD54097.1    KZ288193    PBC34157.1    ADTU01026394    CVRI01000014    CRK89699.1    KQ976417    KYM89934.1    GL769168    EFZ10652.1    KQ981193    KYN45152.1    GBHO01012008    GDHC01018458    JAG31596.1    JAQ00171.1    KQ983203    KYQ46746.1    DS235886    EEB20434.1    KQ435007    KZC13675.1    KK854778    PTY18641.1    GAHY01001556    JAA75954.1    ACPB03027012    HAAD01001027    CDG67259.1    REGN01001731    RNA32890.1    KQ420992    KOF78650.1    RAZU01000163    RLQ67983.1    GGMR01003145    MBY15764.1    GFXV01005313    MBW17118.1    AAMC01074018    CR855706    CAJ83954.1    BC158143    AAI58144.1    ABLF02032208    ABLF02032210    ABLF02035312   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000075882    + More
UP000075902    UP000075840    UP000075903    UP000007062    UP000075886    UP000075883    UP000008820    UP000075901    UP000076408    UP000075884    UP000076407    UP000069940    UP000249989    UP000069272    UP000075900    UP000092461    UP000030765    UP000095300    UP000037069    UP000075880    UP000092460    UP000075920    UP000091820    UP000095301    UP000008792    UP000092443    UP000002320    UP000007798    UP000235965    UP000001070    UP000092553    UP000000803    UP000078200    UP000192221    UP000008711    UP000001292    UP000001819    UP000268350    UP000008744    UP000092444    UP000279307    UP000053097    UP000000311    UP000007801    UP000002282    UP000075885    UP000245037    UP000008237    UP000053825    UP000092462    UP000007266    UP000078492    UP000078542    UP000242457    UP000005205    UP000183832    UP000079169    UP000002358    UP000078540    UP000078541    UP000075809    UP000005203    UP000009046    UP000076502    UP000015103    UP000265080    UP000276133    UP000192223    UP000053454    UP000273346    UP000008143    UP000007819   

PRIDE

H9J8C0    Q1EC98    Q9W3K8   

Pfam

PF13499   EF-hand_7        + More
PF13202   EF-hand_5
PF16061   DUF4803
PF13833   EF-hand_8

Interpro

IPR011992   EF-hand-dom_pair        + More
IPR002048   EF_hand_dom       
IPR028846   Recoverin       
IPR018247   EF_Hand_1_Ca_BS       
IPR032062   DUF4803       

SUPFAM

SSF47473   SSF47473       

CDD

cd00051  EFh

ProteinModelPortal

H9J8C0   A0A2A4K4B0   A0A212EHI0   A0A2H1VJT0   A0A0N1IGE5   A0A194PNY3   + More
A0A182L821   A0A182TPR4   A0A182IAK0   A0A182V3Y6   A0NCH4   A0A182QAK9   A0A182M2S3   Q16ZY6   A0A182T0J7   A0A182YH68   A0A182N8G1   A0A182XBY6   A0A182GXA2   A0A1S4FID1   A0A336LUW0   A0A182FIT0   A0A182RHK8   A0A1B0CG93   A0A084VNW3   A0A1I8PGQ2   A0A0L0C825   A0A182J4M9   A0A0A1X6S6   A0A0C9QEZ1   A0A1B0BVF0   A0A182W5M2   A0A182WA36   A0A1A9WDA8   A0A0C9R1Q9   A0A1I8MVS3   B4MAT9   A0A1A9Y619   B0WZ25   B4NEJ6   A0A034WKV2   A0A2J7PVM5   B4JMD2   A0A0M4F8D8   Q1EC98   Q9W3K8   A0A1A9VDK8   A0A1W4VHZ5   B3NY15   W8CDM0   B4IKW2   Q29IP4   A0A3B0J6S4   B4H2T7   A0A1B0F9J9   A0A3L8DMD4   A0A026WDW1   A0A0K8W0W1   E2A202   B3MRJ8   B4Q0N2   A0A182PSU7   A0A2P8XB94   A0A1B6I8K2   E2C8Y1   A0A0L7QRU4   A0A1B0DM81   A0A139WPA7   A0A151J8V2   A0A151INX9   A0A0T6B4D5   A0A310SKN6   A0A2A3ER24   A0A158NUH1   A0A1J1HP21   A0A1S3D0W1   K7J8P5   A0A195BU40   E9J932   A0A195FXW8   A0A0A9YJ23   A0A151WFX7   A0A087ZUV7   E0W478   A0A154PP59   A0A2R7WH60   R4G3M2   T1HY54   T2M555   A0A3P8TC42   A0A3M7SBK5   A0A1W4WRE0   A0A0L8GPY8   A0A3P8TAR7   A0A3L7HQ55   A0A2S2NEW4   A0A2H8TVC9   Q28D49   B0BLS4   X1WIN2  

PDB

5YPX     E-value=2.3166e-33,     Score=350

KEGG

101745368    no KO assigned | (RefSeq) EF-hand calcium-binding domain-containing protein 1

GO

GO:0005509   GO:0016021   GO:0019509   GO:0010309   GO:0016020   GO:0008237   GO:0051103   GO:0003677   GO:0006281   GO:0048384  

PANTHER

PTHR23055  

Length:

153

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00021

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.13218

outside

1  -  153

 

 

Pi

23.015876

Theta

26.704411

Tajima's D

-0.353561

CLR

0.170093

CSRT

0.284685765711714

Interpretation

Uncertain