SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03094
Pre Gene Modal
BGIBMGA005809
Annotation
PREDICTED:_uncharacterized_protein_LOC106129825_[Amyelois_transitella]
Location in the cell
Extracellular   Reliability : 1.143 Nuclear   Reliability : 1.017 PlasmaMembrane   Reliability : 1.553
 

Sequence

CDS
ATGACGCTACACTGGTGGATGCACTGGTTCTGGGTGACGATTCTGCTGATTCTCCTTGGCAGCGAATCGACTTTCGGTGCCCCCCAGTCTGAAGAGCTCCTGCACATAACACCTGAGCTAGAAACGGAACGACATTCTGAACGACAAAACCGTGCTCTGTACATCAGCAAAACTGTAATCATCACAACCCCACACCCGTTGGTAAAAAACATTACGTTAAACAACCAAACTGACGAGCCAATATTGGCGACCAACGTTACCCAAGTCAACGTGACCGAGATCGTTCACCCGGCGATACAGTGGACCGCGGCCAATGCAAACGTAACAGTACAGAATAGTACTGTCAATACAACTTTGACAACCAACGTGACAGATGACGTCACGACAACACCGTCAAATGCAAACAACCTCACGAGGGAAGAGTACATCAAAGATTTGACTCACATCGAAGGAATTCCTGACAGCAGGATCGTGACCGAGAAACCGTTGTCTTTGGAGACCGCCTTCTCTCACACGAGAATACCGAACGTAGAGTCTTCCAGGAGAATGGTGGAAGAGGAACGGGGAATAGACACGGGAGTTATAGCGGGTATCGCTTTTGCTGGTGTGGTGTTGGCAGCGCTGGCTGGCAGTATAGCTTTCGTGCTGTACAGGAGGAGATACCTGAACAAGCCCCAGACCTTGAATGACAAATGCTCGAATCCCGACTCGAGTGGTTATCTTGACGACAGCACTGTTAGGGATAATTCTGAAGAGATGTACAGTCTGGACAATGATTCGTTTCTGAACTCCCTGGAAGCCATGACAATACAGAACTACTGGACAGATACAGTAAAACATACTAAACTATAA
Protein
MTLHWWMHWFWVTILLILLGSESTFGAPQSEELLHITPELETERHSERQNRALYISKTVIITTPHPLVKNITLNNQTDEPILATNVTQVNVTEIVHPAIQWTAANANVTVQNSTVNTTLTTNVTDDVTTTPSNANNLTREEYIKDLTHIEGIPDSRIVTEKPLSLETAFSHTRIPNVESSRRMVEEERGIDTGVIAGIAFAGVVLAALAGSIAFVLYRRRYLNKPQTLNDKCSNPDSSGYLDDSTVRDNSEEMYSLDNDSFLNSLEAMTIQNYWTDTVKHTKL

Summary

Ontologies

Topology

SignalP
Position:   1 - 26,         Likelihood:  0.985109
 
 
Length:
283
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
37.12419
Exp number, first 60 AAs:
14.21546
Total prob of N-in:
0.58952
POSSIBLE N-term signal
sequence
outside
1  -  194
TMhelix
195  -  217
inside
218  -  283
 
 

Population Genetic Test Statistics

Pi
27.058123
Theta
27.614534
Tajima's D
-0.715273
CLR
13.586347
CSRT
0.192990350482476
Interpretation
Uncertain
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