Gene

KWMTBOMO03091  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005813

Annotation

putative_histone-fold_protein_CHRAC_subunit_[Danaus_plexippus]

Location

Bomo_Chr5(-):17782324-17783743      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.661

CDS

ATGGCTACCCCAAAAAGTGAAAAAGATCTGCATTTGCCCCTGTCCAGGGTTAAAACAATAATGAAAAGCTCACCGGACGTAGAAGCAGTTGGTCCAGAACCACTATATTTAGTCACTAAAGTTACAGAATTGTTTGTAATGGATCTAGCAAAGAGGGCACACAAAAACAGTAATGCCAACTTCCTAGAATACAAACATATTGCTGATATTGTTCAAGAGGATGACACTTTAGACTTTCTCAGAGAGATCATGCCTCGAAAGATCACTGTGCGTCAATTCAAAGAGATGATGGCCAAGAAAGCTGCCAAGAACGGTGATGATTCAAGTGAAGACTCCAGTGAAGACAGCAGTGAAGACTCATCCAGTAACAATGAACAAGAGTGA

Protein

MATPKSEKDLHLPLSRVKTIMKSSPDVEAVGPEPLYLVTKVTELFVMDLAKRAHKNSNANFLEYKHIADIVQEDDTLDFLREIMPRKITVRQFKEMMAKKAAKNGDDSSEDSSEDSSEDSSSNNEQE

Uniprot

H9J8H1   A0A2H1X365   A0A212EKT0   A0A2A4JJ45   S4PIY6   A0A1E1WAM3   + More
A0A0N1INU4   I4DKZ9   A0A0L7LSI6   K7J8Q5   A0A087ZUV8   A0A2A3ESY4   A0A232F4Q0   A0A310S7U1   A0A0N0BG97   A0A154PQJ9   A0A026W209   A0A3L8DM74   F4WHB1   A0A195BRP2   A0A158NB44   A0A0L7QRU9   A0A151J4E4   A0A195EVR2   A0A195D7V8   E2B816   A0A1B6GT00   A0A1B6LUM2   A0A1B6J773   A0A2P8YQK1   C4WX95   A0A182XU99   A0A182VA43   Q7QJE7   A0A182U9L7   A0A1I8JTU5   A0A182KRB9   A0A1W2WCD7   A0A084WNA6   A0A2J7PXU5   E9HCX4   C1BTC3   A0A182MSJ9   A0A182RSN5   A0A067QZ01   A0A182LTV7   C1BPJ2   T1FIN8   A0A336MFI5   W5JPB8   A0A069DP32   A0A164M723   C1BTE1   A0A0V0GEW8   A0A1S3J120   A0A0P5XB17   A0A0P5VA49   U5EHH9   A0A0N8CV29   A0A0P6GNB6   A0A0P5IUY3   A0A0P5CKP9   A0A0P5G482   A0A0P4YDB2   A0A0P5BK43   A0A0P5LX15   A0A0P6GT63   A0A1S3JXD1   A0A2M4AVT9   A0A0P4VSG0   T1HCZ9   A0A0P6DLU4   A0A0P5BSB6   A0A0P5H330   A0A182FZS9   Q171Z8   A0A0P6B9V4   K1QIT6   A0A0P6DRD7   A0A0P6JMG8   A0A182PZ79   A0A1A8DF95   A0A0T6BAF1   C1C1Q6   A0A1W4X4Q4   A0A0M3QZQ9   A0A1A8SG40   A0A1A8NT04   A0A1A8HRG4   A0A182G0U1   A0A023EI21   A0A1A8A874   A0A1A7YR31   A0A0K8TT29  

Pubmed

19121390    22118469    23622113    26354079    22651552    26227816    + More
20075255    28648823    24508170    30249741    21719571    21347285    20798317    29403074    12364791    14747013    17210077    20966253    24438588    21292972    24845553    23254933    20920257    23761445    26334808    27129103    17510324    22992520    26483478    24945155    26369729   

EMBL

BABH01027403    ODYU01013088    SOQ59771.1    AGBW02014213    OWR42096.1    NWSH01001344    + More
PCG71603.1    PCG71604.1    GAIX01000009    JAA92551.1    GDQN01007038    JAT84016.1    KQ460847    KPJ11987.1    AK401967    KQ459597    BAM18589.1    KPI95131.1    JTDY01000196    KOB78349.1    KZ288193    PBC34161.1    NNAY01001022    OXU25459.1    KQ765174    OAD54109.1    KQ435792    KOX74264.1    KQ435007    KZC13654.1    KK107485    EZA50078.1    QOIP01000006    RLU21426.1    GL888158    EGI66388.1    KQ976417    KYM89680.1    ADTU01010875    KQ414768    KOC61360.1    KQ980151    KYN17490.1    KQ981953    KYN32350.1    KQ976760    KYN08539.1    GL446273    EFN88158.1    GECZ01004217    JAS65552.1    GEBQ01012596    JAT27381.1    GECU01012685    GECU01007296    JAS95021.1    JAT00411.1    PYGN01000430    PSN46521.1    ABLF02029049    AK342521    BAH72515.1    AAAB01008807    EAA04577.4    APCN01000204    ATLV01024580    KE525352    KFB51700.1    NEVH01020852    PNF21157.1    GL732621    EFX70446.1    BT077852    ACO12276.1    AXCM01006463    KK852819    KDR15621.1    AXCM01011849    BT076521    ACO10945.1    AMQM01008357    KB097768    ESN90139.1    UFQT01000502    SSX24818.1    ADMH02000549    ETN65956.1    GBGD01003542    JAC85347.1    LRGB01003056    KZS04791.1    BT077870    BT120727    HACA01024006    HACA01024007    ACO12294.1    ADD24367.1    CDW41367.1    GECL01000285    JAP05839.1    GDIP01074721    JAM28994.1    GDIP01102515    JAM01200.1    GANO01003014    JAB56857.1    GDIP01096015    JAM07700.1    GDIQ01031366    JAN63371.1    GDIQ01216225    JAK35500.1    GDIP01169170    JAJ54232.1    GDIQ01251316    JAK00409.1    GDIP01230141    JAI93260.1    GDIP01183902    JAJ39500.1    GDIQ01164042    JAK87683.1    GDIQ01030121    JAN64616.1    GGFK01011588    MBW44909.1    GDKW01003672    JAI52923.1    ACPB03014552    GDIQ01076859    JAN17878.1    GDIP01180754    JAJ42648.1    GDIQ01233864    JAK17861.1    CH477442    EAT40840.1    GDIP01018186    JAM85529.1    JH815847    EKC36692.1    GDIQ01074167    JAN20570.1    GDIQ01002851    JAN91886.1    HAEA01003084    SBQ31564.1    LJIG01002636    KRT84304.1    BT080785    ACO15209.1    CP012528    ALC49809.1    HAEH01010001    HAEI01014414    SBS16883.1    HAEF01013917    HAEG01004652    SBR72176.1    HAED01000832    SBQ86677.1    JXUM01135285    KQ568248    KXJ69084.1    GAPW01004866    JAC08732.1    HADY01011905    HAEJ01000515    SBP50390.1    HADX01010382    SBP32614.1    GDAI01000307    JAI17296.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053240    UP000053268    UP000037510    + More
UP000002358    UP000005203    UP000242457    UP000215335    UP000053105    UP000076502    UP000053097    UP000279307    UP000007755    UP000078540    UP000005205    UP000053825    UP000078492    UP000078541    UP000078542    UP000008237    UP000245037    UP000007819    UP000076407    UP000075903    UP000007062    UP000075902    UP000075840    UP000075882    UP000030765    UP000235965    UP000000305    UP000075883    UP000075900    UP000027135    UP000015101    UP000000673    UP000076858    UP000085678    UP000015103    UP000069272    UP000008820    UP000005408    UP000075885    UP000192223    UP000092553    UP000069940    UP000249989   

PRIDE

H9J8H1   

Pfam

PF00808   CBFD_NFYB_HMF        + More
PF12796   Ank_2
PF04437   RINT1_TIP1

Interpro

IPR009072   Histone-fold        + More
IPR003958   CBFA_NFYB_domain       
IPR002110   Ankyrin_rpt       
IPR036770   Ankyrin_rpt-contain_sf       
IPR020683   Ankyrin_rpt-contain_dom       
IPR007528   RINT1_Tip20       

SUPFAM

SSF47113   SSF47113        + More
SSF48403   SSF48403       

Gene 3D

1.10.20.10     1.25.40.20    

CDD

cd00204  ANK

ProteinModelPortal

H9J8H1   A0A2H1X365   A0A212EKT0   A0A2A4JJ45   S4PIY6   A0A1E1WAM3   + More
A0A0N1INU4   I4DKZ9   A0A0L7LSI6   K7J8Q5   A0A087ZUV8   A0A2A3ESY4   A0A232F4Q0   A0A310S7U1   A0A0N0BG97   A0A154PQJ9   A0A026W209   A0A3L8DM74   F4WHB1   A0A195BRP2   A0A158NB44   A0A0L7QRU9   A0A151J4E4   A0A195EVR2   A0A195D7V8   E2B816   A0A1B6GT00   A0A1B6LUM2   A0A1B6J773   A0A2P8YQK1   C4WX95   A0A182XU99   A0A182VA43   Q7QJE7   A0A182U9L7   A0A1I8JTU5   A0A182KRB9   A0A1W2WCD7   A0A084WNA6   A0A2J7PXU5   E9HCX4   C1BTC3   A0A182MSJ9   A0A182RSN5   A0A067QZ01   A0A182LTV7   C1BPJ2   T1FIN8   A0A336MFI5   W5JPB8   A0A069DP32   A0A164M723   C1BTE1   A0A0V0GEW8   A0A1S3J120   A0A0P5XB17   A0A0P5VA49   U5EHH9   A0A0N8CV29   A0A0P6GNB6   A0A0P5IUY3   A0A0P5CKP9   A0A0P5G482   A0A0P4YDB2   A0A0P5BK43   A0A0P5LX15   A0A0P6GT63   A0A1S3JXD1   A0A2M4AVT9   A0A0P4VSG0   T1HCZ9   A0A0P6DLU4   A0A0P5BSB6   A0A0P5H330   A0A182FZS9   Q171Z8   A0A0P6B9V4   K1QIT6   A0A0P6DRD7   A0A0P6JMG8   A0A182PZ79   A0A1A8DF95   A0A0T6BAF1   C1C1Q6   A0A1W4X4Q4   A0A0M3QZQ9   A0A1A8SG40   A0A1A8NT04   A0A1A8HRG4   A0A182G0U1   A0A023EI21   A0A1A8A874   A0A1A7YR31   A0A0K8TT29  

PDB

2BYM     E-value=1.14179e-13,     Score=179

KEGG

101740858    K11656 chromatin accessibility complex protein 1 | (RefSeq) chromatin accessibility complex protein

GO

GO:0046982   GO:0005634   GO:0070868   GO:0008623   GO:0005783   GO:0048193   GO:0008270   GO:0006518   GO:0016020   GO:0008237   GO:0051103   GO:0003677   GO:0006281   GO:0048384  

PANTHER

PTHR13520  

Subcellular location

Nucleus  

Length:

127

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00482

Exp number, first 60 AAs:

0.00482

Total prob of N-in:

0.21047

outside

1  -  127

 

 

Pi

20.379036

Theta

21.577102

Tajima's D

-0.338487

CLR

0.096095

CSRT

0.275886205689716

Interpretation

Uncertain