Gene

KWMTBOMO03085

Pre Gene Modal

BGIBMGA005761

Annotation

PREDICTED:_protein_RRNAD1-like_[Bombyx_mori]

Location

Bomo_Chr5(+):17703554-17709802      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.076 Mitochondrial   Reliability : 1.709 Nuclear   Reliability : 1.429

CDS

ATGAAGTCTCAGATAAATAACGTAAAAACCTGTATCGATATGTCTCTAAAAGTTATACGTATGTACGATTGGTTGCTGGATTTATATGTATTGGATTTCTTTGTAGACAATCACTGGTATAGGCTTCCGAAATCTTGGCAAGAGAATCTTGATGAGATTGCCTTGGAGCAATTGGGAAATATATTATCAGAAAAACCAACCAATCATATCTTTCCATTGTCATTGCTAGCATTAATTGCCACTGTAAAGGCATTGGGCCTACCACGAAAAAACAGCAAAACTATAAAAAAAGATGTTACACAAATCGCAGACCAATGCAGTACTTATAGCAAAATAAAAAATCTATTCTTGAAACATGTTAAATTGAAGAAGCGGCATGAAGTCAGTGTAATGGCTGAAATCGTTACTGATGTTGCATTGAAATCAAGATGTAATGCAGTTATAGACTTTGGTTCAGGTCTCGGTCATTTAGTGAGGATGTTGGCATATAAGAACAAGTTGTATACTGCAGGCATTGAGTGTCAAAAGCAACTGACGGAGGAGGCTAGAAAACTAGATCTTGAATTTGAATACACTGCAAGAAAATACACCAAAGAAGAGTTTACACCTAATCTACATCGGCCCATACATTATAACATCTCATTATCCAATCATGAGCAACTTCAACATCTGCCTTTACCGACTCATATGACAAACTATGGATTGATTGGGCTCCATCCATGTGGAGATTTAGGCCCTTTACTCTTGAAACACTTCATATGTTCCAATCAGGTGAAATTCATATGTGTTGTAGGCTGTTGTTATACAAAGTTAACAGCTGAAGGATATCCAATAAGCAACTATCTTAAAAAATTAAAAGGTGATCTGTCTTTTGTGAGCAGAGAGATTGCTTGTCACGCTATCGAAATGTACTCTGAGAGATTGAGGCAAGGACTTTATGAAGATTTAAAGGTTCACGCATACAGAGCAGCTCTGGAGAAGATATTAGTTGAACATAATCCCAAATTGAAACACGCTCCAGTTAGGAGTTTGAAACACACCCAAGATTTGAGTTTTGAAAAATACTGTTCGATGGCGGTTGAGAAGCTGTGCTTGCGTTGGCCGCTGCCGGACGTGTCGGAGAGAGACATGTCGGCGCGGGACGAGTCGGTGCGGAGCGTGTCGGCCAGAGACTTGTCGGCGCGGGACGTGTTGGCGTGCGGCGTGTCGGCGCGCGAGGTGTCGGCGGGCGCGGAGGAGGTGCGCGAGTGGCGGCGCGTGGTGGTGGTGTACACGCTGCGGCTGGCGCTGGCGCCGCTGGTCGAGACCGTGCTTTTGTTGGACAGACTGCTCTTTGTGTTGGAACACGGTTTATCCTGTGAGATCCGTCCGATTTTCGACCCGAAGTTGTCTCCAAGGAATCACGTGATAATTGCAAGAAAACCTAATTAG

Protein

MKSQINNVKTCIDMSLKVIRMYDWLLDLYVLDFFVDNHWYRLPKSWQENLDEIALEQLGNILSEKPTNHIFPLSLLALIATVKALGLPRKNSKTIKKDVTQIADQCSTYSKIKNLFLKHVKLKKRHEVSVMAEIVTDVALKSRCNAVIDFGSGLGHLVRMLAYKNKLYTAGIECQKQLTEEARKLDLEFEYTARKYTKEEFTPNLHRPIHYNISLSNHEQLQHLPLPTHMTNYGLIGLHPCGDLGPLLLKHFICSNQVKFICVVGCCYTKLTAEGYPISNYLKKLKGDLSFVSREIACHAIEMYSERLRQGLYEDLKVHAYRAALEKILVEHNPKLKHAPVRSLKHTQDLSFEKYCSMAVEKLCLRWPLPDVSERDMSARDESVRSVSARDLSARDVLACGVSAREVSAGAEEVREWRRVVVVYTLRLALAPLVETVLLLDRLLFVLEHGLSCEIRPIFDPKLSPRNHVIIARKPN

Uniprot

H9J8B9   A0A2A4JAH1   S4PX59   A0A2H1WAQ6   A0A194PQ87   A0A212EKT2   + More
A0A2P8XL83   A0A2J7QPN1   A0A067RIL5   A0A1W4WB34   A0A1Y1MKA7   A0A0L0BPU3   A0A2J7QPM4   B3N9B6   A0A0L7R7T7   A0A0J9R7U6   A8DY65   B4QF75   A0A0Q9WGR1   B4LKQ9   B4HRG7   A0A026WY32   B4KRA3   A0A2A3EHN1   A0A1I8M294   B3MGB7   A0A0J9R8Y7   A0A088AJB0   A0A154NWW3   D6W7X6   A0A1L8DGH9   A0A1A9X3N4   A0A195BA52   A0A195EV03   F4WP10   Q290Y9   A0A158NPK6   B4MRL1   A0A151WLZ7   B4P264   A0A1I8Q3N7   W8BM86   A0A0C9QI88   A0A1A9VP14   B7S8Y8   A0A195E585   E2B116   A0A1B0BH64   A0A0Q5WC72   A0A1A9ZCL9   E2B3U7   A0A3B0J622   A0A1A9YAZ4   B7S8Q6   A0A0J9R7L9   A0A1W4VZD8   B4QF73   A0A0J9TVT8   A9UNB1   K7J5J4   A0A3L8DWE3   B4GB15   A0A0Q9WFW3   A0A195CMF2   Q7QJP7   A0A310S7P3   A0A0J9R7U9   A0A182KRQ6   A0A182X3E8   A0A0K8UA55   A0A182I3M1   A0A182VNC2   B4J7V3   A0A182U887   W8B7A2   A0A0M4EDL2   A0A0R1DTB1   S6D4V8   A0A0A1XNS2   G3WTR8   A0A0Q9X882   A0A0P5CFB9   C3Z7E1   A0A182QV05   U4UKN0   E0VQ57   N6TGH2   A0A182M5S5   A0A1B0C8Q7   A0A182WIP3   A0A0K8VVZ6   A0A232FHH5   A0A182P3M2   A0A1S3AIR8   A0A182J217   A0A182RHT8   A0A0P6JC24  

Pubmed

19121390    23622113    26354079    22118469    29403074    24845553    + More
28004739    26108605    17994087    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    24508170    25315136    18362917    19820115    21719571    15632085    21347285    17550304    24495485    20798317    26109357    26109356    20075255    30249741    12364791    14747013    17210077    20966253    23938757    25830018    21709235    18563158    23537049    20566863    28648823   

EMBL

BABH01027412    NWSH01002324    PCG68524.1    GAIX01005608    JAA86952.1    ODYU01007288    + More
SOQ49932.1    KQ459597    KPI95128.1    AGBW02014213    OWR42100.1    PYGN01001804    PSN32724.1    NEVH01012088    PNF30535.1    KK852659    KDR19136.1    GEZM01032196    GEZM01032193    JAV84785.1    JRES01001567    KNC21988.1    PNF30534.1    CH954177    EDV59603.2    KQ414637    KOC66940.1    CM002911    KMY92138.1    AE013599    ABV53725.1    CM000362    EDX06104.1    CH940648    KRF80238.1    EDW61782.2    CH480816    EDW46849.1    KK107073    EZA60626.1    CH933808    EDW09319.2    KZ288244    PBC31227.1    CH902619    EDV37820.2    KMY92139.1    KQ434777    KZC04159.1    KQ971307    EFA11151.2    GFDF01008624    JAV05460.1    KQ976542    KYM81074.1    KQ981965    KYN31722.1    GL888243    EGI63941.1    CM000071    EAL25223.3    ADTU01022555    CH963850    EDW74750.2    KQ982944    KYQ48894.1    CM000157    EDW89265.2    GAMC01012094    GAMC01012088    JAB94461.1    GBYB01000262    JAG70029.1    EF710656    ACE75363.1    KQ979608    KYN20350.1    GL444771    EFN60617.1    JXJN01014196    KQS70908.1    GL445407    EFN89616.1    OUUW01000001    SPP75182.1    EF710650    ACE75279.1    KMY92137.1    EDX06102.1    KMY92140.1    BT031275    AAF59163.4    ABY20516.1    QOIP01000003    RLU24757.1    CH479181    EDW32117.1    KRF80239.1    KQ977574    KYN01870.1    AAAB01008807    EAA03936.4    KQ772178    OAD52468.1    KMY92141.1    GDHF01028780    GDHF01027981    JAI23534.1    JAI24333.1    APCN01000215    CH916367    EDW01159.1    GAMC01012093    JAB94462.1    CP012524    ALC42015.1    KRJ98337.1    HF586476    CCQ71313.1    GBXI01001313    JAD12979.1    AEFK01162048    KRG04587.1    GDIP01171134    JAJ52268.1    GG666590    EEN51737.1    AXCN02000593    KB632399    ERL94634.1    DS235389    EEB15513.1    APGK01039164    KB740967    ENN76878.1    AXCM01005430    AJWK01001259    GDHF01009265    JAI43049.1    NNAY01000183    OXU30216.1    GDIQ01009489    JAN85248.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000245037    UP000235965    + More
UP000027135    UP000192221    UP000037069    UP000008711    UP000053825    UP000000803    UP000000304    UP000008792    UP000001292    UP000053097    UP000009192    UP000242457    UP000095301    UP000007801    UP000005203    UP000076502    UP000007266    UP000091820    UP000078540    UP000078541    UP000007755    UP000001819    UP000005205    UP000007798    UP000075809    UP000002282    UP000095300    UP000078200    UP000078492    UP000000311    UP000092460    UP000092445    UP000008237    UP000268350    UP000092443    UP000002358    UP000279307    UP000008744    UP000078542    UP000007062    UP000075882    UP000076407    UP000075840    UP000075903    UP000001070    UP000075902    UP000092553    UP000007648    UP000001554    UP000075886    UP000030742    UP000009046    UP000019118    UP000075883    UP000092461    UP000075920    UP000215335    UP000075885    UP000079721    UP000075880    UP000075900   

PRIDE

H9J8B9    A8DY65   

Pfam

PF13679   Methyltransf_32        + More
PF03901   Glyco_transf_22

Interpro

IPR025714   Methyltranfer_dom        + More
IPR029063   SAM-dependent_MTases       
IPR005599   GPI_mannosylTrfase       
IPR020596   rRNA_Ade_Mease_Trfase_CS       

SUPFAM

SSF53335   SSF53335       

ProteinModelPortal

H9J8B9   A0A2A4JAH1   S4PX59   A0A2H1WAQ6   A0A194PQ87   A0A212EKT2   + More
A0A2P8XL83   A0A2J7QPN1   A0A067RIL5   A0A1W4WB34   A0A1Y1MKA7   A0A0L0BPU3   A0A2J7QPM4   B3N9B6   A0A0L7R7T7   A0A0J9R7U6   A8DY65   B4QF75   A0A0Q9WGR1   B4LKQ9   B4HRG7   A0A026WY32   B4KRA3   A0A2A3EHN1   A0A1I8M294   B3MGB7   A0A0J9R8Y7   A0A088AJB0   A0A154NWW3   D6W7X6   A0A1L8DGH9   A0A1A9X3N4   A0A195BA52   A0A195EV03   F4WP10   Q290Y9   A0A158NPK6   B4MRL1   A0A151WLZ7   B4P264   A0A1I8Q3N7   W8BM86   A0A0C9QI88   A0A1A9VP14   B7S8Y8   A0A195E585   E2B116   A0A1B0BH64   A0A0Q5WC72   A0A1A9ZCL9   E2B3U7   A0A3B0J622   A0A1A9YAZ4   B7S8Q6   A0A0J9R7L9   A0A1W4VZD8   B4QF73   A0A0J9TVT8   A9UNB1   K7J5J4   A0A3L8DWE3   B4GB15   A0A0Q9WFW3   A0A195CMF2   Q7QJP7   A0A310S7P3   A0A0J9R7U9   A0A182KRQ6   A0A182X3E8   A0A0K8UA55   A0A182I3M1   A0A182VNC2   B4J7V3   A0A182U887   W8B7A2   A0A0M4EDL2   A0A0R1DTB1   S6D4V8   A0A0A1XNS2   G3WTR8   A0A0Q9X882   A0A0P5CFB9   C3Z7E1   A0A182QV05   U4UKN0   E0VQ57   N6TGH2   A0A182M5S5   A0A1B0C8Q7   A0A182WIP3   A0A0K8VVZ6   A0A232FHH5   A0A182P3M2   A0A1S3AIR8   A0A182J217   A0A182RHT8   A0A0P6JC24  

KEGG

101741516    no KO assigned | (RefSeq) protein RRNAD1-like

GO

GO:0016021   GO:0016757   GO:0008168   GO:0000179  

Length:

476

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.93401

Exp number, first 60 AAs:

0.31254

Total prob of N-in:

0.12193

outside

1  -  476

 

 

Pi

17.743589

Theta

22.407546

Tajima's D

-0.695717

CLR

0.003351

CSRT

0.1976401179941

Interpretation

Uncertain