Gene

KWMTBOMO03078

Pre Gene Modal

BGIBMGA005819

Annotation

PREDICTED:_aquaporin_PIP2-7_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr5(-):17564910-17573948      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.795 PlasmaMembrane   Reliability : 1.351

CDS

ATGAGACTTGGTATAATGCGGGTGCTGATGATAAATGTAAGCGTGCCGGGCTACGGTGGAGGGCTATCAGCGTCGCTGCCGGGCGGCGGCGCGGCGTGGGAGCGACTCGGCACGGAGCTCGTGCTGTCGGCGCTGGTGGCTGCGGCGTATTTTGCCGCGATGGAGCGACGGTGGACCGGAGCCGCCCCCGCCCTCCTGGGAGCGGCCTACTGTGCTGCGAGCTTCGTTTCGATGCCATCATTGAATCCGGCGCGGTCACTGGGACCATCGTTTGTCCTGTCACGGTGGGAGAGCCACTGGGTGTGCTGGGTGGGGGGTCTCGGTGGGGGAGTAGCCAGTGCGCTTCTTCACGAGTGGGGCAGCCGAAAACGCCGCACGTCCTCCTCGCGGGCCTCAACACCACGAGATCTGGACGAGCTGGACAAACCCGTGTTCCCTTCTGCCCATCATCATTACCGGCCGTCGTATTGCGCTGCAGCTCCTCGACCAGACACGGCGGAGCCTTTGTATTCTGGAACTAAGTCTCTGTACTGCCGATCACCGCCGCCCGCTAGACATGCTTTGCACAGGTCGCAGTCGGTGTACAGTAAAGGCAGTTCGGCGACGAGCGGCGTGGCGAGCGCGGCTGCGGCGCCCCCCGCCCCGCTGCCGCTGCGCGCCCCCGCCCCGCACGCACACACGCACAACCAGAACGCGCAGAACGCACAGCGGGATCCCCCTTACGGCGCCGCCAACGGAATCAGACCCGGACCCGCAGGCGCCGCTGTCACAGAACGCCGCGATTCGATGTACGGAGTTCGTCGTCCGGAGGATAACGCGTACGGCACGTACTCGCGAACGCACGCGAACGCGCTCGCGTACCGGCACACGCACGGCGAACACTACTAG

Protein

MRLGIMRVLMINVSVPGYGGGLSASLPGGGAAWERLGTELVLSALVAAAYFAAMERRWTGAAPALLGAAYCAASFVSMPSLNPARSLGPSFVLSRWESHWVCWVGGLGGGVASALLHEWGSRKRRTSSSRASTPRDLDELDKPVFPSAHHHYRPSYCAAAPRPDTAEPLYSGTKSLYCRSPPPARHALHRSQSVYSKGSSATSGVASAAAAPPAPLPLRAPAPHAHTHNQNAQNAQRDPPYGAANGIRPGPAGAAVTERRDSMYGVRRPEDNAYGTYSRTHANALAYRHTHGEHY

Similarity

Belongs to the MIP/aquaporin (TC 1.A.8) family.

Uniprot

H9J8H7   A0A2H1W658   A0A194PNW5   A0A212EGU0   A0A0N0PBE2   A0A0T6ATC6   + More
A0A182QNB7   A0A0A9XE43   A0A146LG91   A0A3F2YW06   A0A165Y505   A0A0P6FHE8   A0A0P6IWW3   A0A2J7RPG4   A0A146LC65   A0A0A9XMC6   A0A0L0CGC6   W8C2H2   L7P705   A0A1A9YA32   A0A1B0BJI7   A0A1A9WVZ9   A0A0K8VRI1   A0A0K8UVA6   A0A1B6I0Q9   A0A084VMQ6   A0A182FZQ0  

Pubmed

19121390    26354079    22118469    25401762    26823975    26108605    + More
24495485    24438588   

EMBL

BABH01027420    ODYU01006602    SOQ48585.1    KQ459597    KPI95121.1    AGBW02015027    + More
OWR40692.1    KQ460968    KPJ10238.1    LJIG01022862    KRT78338.1    AXCN02000636    GBHO01025345    JAG18259.1    GDHC01012060    JAQ06569.1    KT981952    AMZ04828.1    GDIQ01050144    JAN44593.1    GDIQ01003277    JAN91460.1    NEVH01001360    PNF42720.1    GDHC01012768    JAQ05861.1    GBHO01025344    JAG18260.1    JRES01000418    KNC31443.1    GAMC01000473    JAC06083.1    CCAG010007822    JN685590    AFP49901.1    JXJN01015406    GDHF01010820    GDHF01005200    JAI41494.1    JAI47114.1    GDHF01021685    JAI30629.1    GECU01027216    JAS80490.1    ATLV01014618    ATLV01014619    KE524975    KFB39250.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000053240    UP000075886    UP000075884    + More
UP000235965    UP000037069    UP000092444    UP000092443    UP000092460    UP000091820    UP000030765    UP000069272   

PRIDE

H9J8H7   

Pfam

PF00230   MIP

Interpro

IPR023271   Aquaporin-like        + More
IPR034294   Aquaporin_transptr       
IPR000425   MIP       
IPR022357   MIP_CS       

SUPFAM

SSF81338   SSF81338       

Gene 3D

1.20.1080.10    

CDD

cd00333  MIP

ProteinModelPortal

H9J8H7   A0A2H1W658   A0A194PNW5   A0A212EGU0   A0A0N0PBE2   A0A0T6ATC6   + More
A0A182QNB7   A0A0A9XE43   A0A146LG91   A0A3F2YW06   A0A165Y505   A0A0P6FHE8   A0A0P6IWW3   A0A2J7RPG4   A0A146LC65   A0A0A9XMC6   A0A0L0CGC6   W8C2H2   L7P705   A0A1A9YA32   A0A1B0BJI7   A0A1A9WVZ9   A0A0K8VRI1   A0A0K8UVA6   A0A1B6I0Q9   A0A084VMQ6   A0A182FZQ0  

PDB

3IYZ     E-value=0.000311709,     Score=103

KEGG

101744439    no KO assigned | (RefSeq) neurogenic protein big brain-like

GO

GO:0015267   GO:0016021   GO:0005215   GO:0006810   GO:0016020   GO:0043546   GO:0020037   GO:0051103   GO:0003677   GO:0006281   GO:0048384   GO:0055085  

PANTHER

PTHR19139  

Length:

295

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

50.2678900000001

Exp number, first 60 AAs:

17.95912

Total prob of N-in:

0.68786

POSSIBLE N-term signal

sequence

outside

1  -  295

 

 

Pi

308.772965

Theta

149.820196

Tajima's D

3.191997

CLR

0.45333

CSRT

0.986350682465877

Interpretation

Uncertain