SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03077  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA014587
Annotation
alpha-crystallin_[Galleria_mellonella]
Location in the cell
Nuclear   Reliability : 2.907
 

Sequence

CDS
ATGTTCAAACTCTTACTATTTCTGACTCTTTTAACTATCGTAGCGTGTTGCCACCACGGGCGTTCCCATAAATGTCGTCACGAGAAGCCCAGCAAGTGCCGTCATGGTGGTAAGCTCGGCTGCAAAGGGGGGAGGCAGCCAGAACGCCCCGACTACGACAAGTACGGAGAGAATCAAAACAAAGAGCTCATCGATGACCTGAGCAGGGACCTGAAGCAAATCGACGATCATCTGCGAAAGCTGTGCAATGAAAATGAAAATTCCGAAACCCGTGAAATGTTCGGGATCCAGAGCTACAATATCTTCGTACCGCTGACCGGAGTGAAAGCTGACAACATCGTCGTCAAAAGCAGATACAGATACGTGTATATAATCGCACGGAGAAATCCGCCGGCGAAGCCTTACACCGAAATCCGGAGGCTGTCGAAATTAGTTGATGTTTCTAGAGGATACTGGATGTACGACGGCCAGGAACTAATAATCCGTTTCAAATACGTCAATTCCGATCCCGAAGAATTATTTAATTGCGGAACTGATTACAATAATTCGTTAGTCACGATACCTAAGTCTGACGTAGACTACGTGTTAGATCTCGACGTGAGGTATGCGCTACAGAACAGCAATGTACAGAAGATAATAAGAGACCACTTCGAGAACTCCACCTCGCCGCGACCTATACCGGAGTCTAATCAATTGGACGCAGCAGATCACAACGAACCAGAAGTCTTCTAG
Protein
MFKLLLFLTLLTIVACCHHGRSHKCRHEKPSKCRHGGKLGCKGGRQPERPDYDKYGENQNKELIDDLSRDLKQIDDHLRKLCNENENSETREMFGIQSYNIFVPLTGVKADNIVVKSRYRYVYIIARRNPPAKPYTEIRRLSKLVDVSRGYWMYDGQELIIRFKYVNSDPEELFNCGTDYNNSLVTIPKSDVDYVLDLDVRYALQNSNVQKIIRDHFENSTSPRPIPESNQLDAADHNEPEVF

Summary

Interpro
IPR008978   HSP20-like_chaperone       
SUPFAM
SSF49764   SSF49764       
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 22,         Likelihood:  0.997856
 
 
Length:
243
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.12315
Exp number, first 60 AAs:
0.11592
Total prob of N-in:
0.00359
outside
1  -  243
 
 

Population Genetic Test Statistics

Pi
147.391026
Theta
106.063023
Tajima's D
1.268215
CLR
0.403342
CSRT
0.737863106844658
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
26280517 RIPCYTKEEIYFPGVK 100.00 0.042
24402669 RNIINADKSNIENYVDIK 100.00 0.042
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