SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03076  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA014586
Annotation
alpha-crystallin_[Galleria_mellonella]
Location in the cell
Nuclear   Reliability : 2.018
 

Sequence

CDS
ATGTTCAAACTTTTACTATTTCTGACTCTTTTAACTATCGTAGCGTGTTGCCACCACGGGCGTTCCCATAAATGTCGTCACGAGAGGCCCAGCAAGTGCCGTCATGGTGGTAAACTCGGCTGCAAATGGGGCAGGTGGTCAGAACGCCCCGGATTCAAGAAATACGGAAAGGATATAAACGAACAACTAATCGAAGACCTGAGCAGGGACCTGAAGCGAATCGACGATCGTCTTCGGAGGCTGTGCAACGATTATGAAAACGCGGGCACTCGTGAACTGTTCGGGACCTACAGTTACGCGCTGTTCATACCACTCCCAGGAGTTACCGCTGATGATATCATCGTCAAAAGCAAATACAGATATGTGTACATAACCGCGCGCCGACCACCGCCAGCGAAGCCCTACACGGAGATCAAGAGGCTGCCTAAACTGGTCGACGCGAGTCAAGGCTACTGGGAATACGAGGACAACGAACTAACAGTCCGTTTTAAATATGTAAACTCTGATACGAATGACGGCGATCTCTACAAATGCGGTTTTGATTACAAAGACTCTTGGATCACGGTGCCAGAGAGCGATGATAAGTATGAACCGGACATTGATGTAAGGTTTGCACTACAGAATGCTGAAGTGAACAACAAAATCAATGATTATTTCAAAAATACCACTACACCACAACCTGACCTCGACACAAACCATCTGGACACTAAGGATCAAGTGAAAACAGAAGACTCATAA
Protein
MFKLLLFLTLLTIVACCHHGRSHKCRHERPSKCRHGGKLGCKWGRWSERPGFKKYGKDINEQLIEDLSRDLKRIDDRLRRLCNDYENAGTRELFGTYSYALFIPLPGVTADDIIVKSKYRYVYITARRPPPAKPYTEIKRLPKLVDASQGYWEYEDNELTVRFKYVNSDTNDGDLYKCGFDYKDSWITVPESDDKYEPDIDVRFALQNAEVNNKINDYFKNTTTPQPDLDTNHLDTKDQVKTEDS

Summary

Interpro
IPR008978   HSP20-like_chaperone       
SUPFAM
SSF49764   SSF49764       
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 22,         Likelihood:  0.998480
 
 
Length:
245
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.33487
Exp number, first 60 AAs:
0.1851
Total prob of N-in:
0.00477
outside
1  -  245
 
 

Population Genetic Test Statistics

Pi
216.702199
Theta
145.751557
Tajima's D
1.527977
CLR
0.03896
CSRT
0.793410329483526
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
24402669 CGFDYK 100.00 2e-12
26280517 DSVAKDIVEIIDK 100.00 2e-07
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