SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03075
Pre Gene Modal
BGIBMGA005820
Annotation
hypothetical_protein_KGM_16997_[Danaus_plexippus]
Location in the cell
PlasmaMembrane   Reliability : 3.091
 

Sequence

CDS
ATGCCTCCGTTGTCTTCGTCAGAACGGAATGACTGTGGCACGGTTAATTTCTTTAAGGCGTGGCTAATTGAACACGAGGAGGCGCAGGTGATGTTGGCCAGTTTCCTGGTGGTGATTGGTCTGTGGTGGCTGCTCCGTGCTGTCCTGACGTTGTTGGTTAATTTGATTATACCAGTGCTCGTCGTGGTTTTGGCTGTTGTCTGCGTACCTCAGCTCCGTGCGCCGCTATTGGGACAAAACTATCCGGCTCTGGCGAATCTATTGCGAAGTATATTGATGAAAATGGCGGAAAATATCAAAACGTGA
Protein
MPPLSSSERNDCGTVNFFKAWLIEHEEAQVMLASFLVVIGLWWLLRAVLTLLVNLIIPVLVVVLAVVCVPQLRAPLLGQNYPALANLLRSILMKMAENIKT

Summary

Pfam
PF00003   7tm_3
Interpro
IPR000337   GPCR_3        + More
IPR017978   GPCR_3_C       

Ontologies

Topology

Length:
101
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
40.31299
Exp number, first 60 AAs:
28.23163
Total prob of N-in:
0.02334
POSSIBLE N-term signal
sequence
outside
1  -  27
TMhelix
28  -  45
inside
46  -  51
TMhelix
52  -  74
outside
75  -  101
 
 

Population Genetic Test Statistics

Pi
446.780456
Theta
177.438765
Tajima's D
4.658724
CLR
0.636223
CSRT
0.99990000499975
Interpretation
Uncertain
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