SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03072
Annotation
PREDICTED:_uncharacterized_protein_LOC105842522_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.184 Nuclear   Reliability : 1.779
 

Sequence

CDS
ATGGATAGTAAGCATGAATACATATTACGCAAAATTCGAGAAGGATGGGAAGGTGGAGTCAAAATAAGTATTGTAAGAATTCCTTATCTTAGATATGCTGATGATACCAGTCTAAGAGATGCTTCTGAAACTGAGATGTGGAACCGTCTTTGGCGTTTAAAGTGGAATAGCGAAGAACTTAGTCTGAGTATAAATAATCGGAACGATTTGAGGAGGCGGAAATGGAAAGATTGGATCACTGCTAGTTTGGTTTTTAGTAACGGGTAA
Protein
MDSKHEYILRKIREGWEGGVKISIVRIPYLRYADDTSLRDASETEMWNRLWRLKWNSEELSLSINNRNDLRRRKWKDWITASLVFSNG

Summary

Pfam
PF00078   RVT_1        + More
PF00058   Ldl_recept_b
Interpro
IPR000477   RT_dom        + More
IPR000033   LDLR_classB_rpt       
IPR011042   6-blade_b-propeller_TolB-like       
Gene 3D

Ontologies

GO

Topology

Length:
88
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00219
Exp number, first 60 AAs:
0.00219
Total prob of N-in:
0.39234
outside
1  -  88
 
 

Population Genetic Test Statistics

Pi
20.702778
Theta
20.231368
Tajima's D
-0.073372
CLR
3.13253
CSRT
0.356782160891955
Interpretation
Uncertain
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