SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03068
Annotation
PREDICTED:_uncharacterized_protein_LOC101747137_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 3.093
 

Sequence

CDS
ATGAGCGATCACACTGAGGGGGAGCTGCACACGTTCACCGACGCCAGCGAGAAGGCCGACGCGTGTGCAGTCTATTGGCGTCAGAAGACAGACGAGAGCACCTACCGCGTCACGCTTCTAGCAGGGAAAGCCAGGGTGACCCCACTGAGACCAGTCTCCATCCCAAGGCTGGAGCTGCAAGCTGCACTGCTGGGGACAAGGATGGCACAGACGATAGCGGACGAATTGGACATCGCGGTCGGTGGAAGGACGTACTGGACTGACTCCAGCACAGTCCTGACATGGATAAAGACCGACCCACGCACGTTCAAACCTTTCGTCGCGCACCGACTCGCCGAGATAGAACAGTCAACGAAGCCCCAAGAATGGCGATGGGTGCCTAGCTCGCAAAACCCAGCAGACGACGCAACTAGAGAGGCGCCGGCGGATTTCGACCACACGCACCGGTGGTTTAATGGACCCGAGTTCCTGGCGTGGGATGAATCGCGCTGGCCCAAGCCACGAACATTCAAGCAAGAACCGTCTGGAGAAGAGAAAGAGGCCTTCCTGGTCGCCACGGCGAGGACCGCTGACGCTAGACCCACGCCCGATCCGCACAGATTCTCGAGCTGGGTCAAGTTATTGAGAGCAACAGCCAGGGTCCTCCAATTTATCGAGCTGTGTCGACCCCGGAAGGAGAGCGCCTGCGTGTCCAGACAATTGGAGCAGCAAGATCCCACGTGGAGGACGACGCGAGCGAAGCAGCCCCGATCAACATGGAAGATAAGGACTCCAGAAGCACCTACAGAAGCGTGGCTGCCGCTCGATCCGCCCCACTTGAAGAAGGCGGAGAAGATCCTACTGAGGAGCAGCCAAGGAGAGAGCTTCGGTGAAAAAGATCCCGAACGTCACCCCAAGTTGCGACGGCTCGACGTCGTGATGGAAGATGGCCTGTTGCGCCTGCGCGGACGTATCGACGCAGCGCAATACATAGATGTAGGCTGCAAGCGACCGATCGTGCTGGACGGGAAGCACGTGATAGCGAGATTATTGATCAAACACTATCACGAGGCGTTCCAGCACGGTAACCACGCAACAGTGATGAACGAGGTGCGGCAGCGCTACTGGATCCTAGGTCTAAGATCGATCATTCGAGCGACGGCCGTCCGATGCCAGTGGTGCAAGGTCTATCGGAGTACACCACGCCTACCGCCCACCGGAAACCTGCCGATAGAGCGGCTACGACATGGAGAGCCGCCGTTCACCTGTGCTGCCGTCGATTACTTCGGGCCGATGACGGTGACTGTAGGACGACGTCACGAGAAGAGAACGAGCGGCGGTCTGCTTAAGAGACCTGCCTCCAAGATGATCCTGCTGGTGCCTGCAACGAGCGACGAGCCCACGCCCATAGAGTCGCCACTACAAGGAGTCGGTGCTACGCACGAGGGGGAGGATATTGGCGACAGCGGCGTCGCCCCACGATTATAG
Protein
MSDHTEGELHTFTDASEKADACAVYWRQKTDESTYRVTLLAGKARVTPLRPVSIPRLELQAALLGTRMAQTIADELDIAVGGRTYWTDSSTVLTWIKTDPRTFKPFVAHRLAEIEQSTKPQEWRWVPSSQNPADDATREAPADFDHTHRWFNGPEFLAWDESRWPKPRTFKQEPSGEEKEAFLVATARTADARPTPDPHRFSSWVKLLRATARVLQFIELCRPRKESACVSRQLEQQDPTWRTTRAKQPRSTWKIRTPEAPTEAWLPLDPPHLKKAEKILLRSSQGESFGEKDPERHPKLRRLDVVMEDGLLRLRGRIDAAQYIDVGCKRPIVLDGKHVIARLLIKHYHEAFQHGNHATVMNEVRQRYWILGLRSIIRATAVRCQWCKVYRSTPRLPPTGNLPIERLRHGEPPFTCAAVDYFGPMTVTVGRRHEKRTSGGLLKRPASKMILLVPATSDEPTPIESPLQGVGATHEGEDIGDSGVAPRL

Summary

EMBL
AF530470    AAQ09229.1    AB042119    BAA95570.1    AB042118    BAA95569.1    + More
KQ459986    KPJ18861.1    AAZX01023278    NWSH01008670    PCG62455.1    LNIX01000003    OXA57597.1    LNIX01000004    OXA56382.1    JXUM01013493    KQ560378    KXJ82704.1    LNIX01000039    OXA39294.1    LNIX01000019    OXA44812.1    OXA44855.1    LNIX01000015    OXA46575.1    GEHC01000914    JAV46731.1    LNIX01000007    OXA52015.1    GAMC01017930    JAB88625.1    JXUM01127084    KQ567147    KXJ69602.1    GAMC01020594    JAB85961.1    GAMC01020598    GAMC01020596    GAMC01020592    JAB85959.1    JXUM01136032    KQ568367    KXJ69026.1    GEHC01000913    JAV46732.1    JXUM01083542    KQ563383    KXJ73941.1    GEHC01000967    JAV46678.1    GGFL01001842    MBW66020.1    GGFL01001682    MBW65860.1    ODYU01003174    SOQ41584.1    GGFJ01001476    MBW50617.1    GGFJ01001462    MBW50603.1    AB110069    BAD01590.1    BAD01589.1    GGFJ01000302    MBW49443.1    GGFJ01000218    MBW49359.1    JXUM01111221    KQ565482    KXJ70922.1    JTDY01001530    KOB73634.1    GGFL01005193    MBW69371.1    GEHC01000947    JAV46698.1    GEZM01052586    JAV74401.1    JXUM01151198    KQ571164    KXJ68235.1    JXUM01144298    KQ569759    KXJ68523.1    GCES01103975    JAQ82347.1    GDHC01018323    JAQ00306.1    OXA55241.1    GCES01110894    JAQ75428.1    GCES01111900    JAQ74422.1    GCES01134385    JAQ51937.1    GDIP01004568    JAM99147.1    GDIP01036233    JAM67482.1    MRZV01000348    PIK51982.1    GGFK01006929    MBW40250.1    GEZM01052587    JAV74399.1    GEHC01000872    JAV46773.1    GCES01140631    JAQ45691.1    AAGJ04091218    AAGJ04001285    AAGJ04146728    AAGJ04146729    GCES01132273    JAQ54049.1    AAGJ04142769    AAGJ04142770    GCES01097166    JAQ89156.1    AAGJ04125735    LSMT01000016    PFX33015.1    GDIQ01002920    JAN91817.1    JXUM01146045    JXUM01146046    GDIQ01143107    JAL08619.1    GCES01097275    JAQ89047.1    GBYX01150372    JAO92643.1    GDIQ01002921    JAN91816.1    AAGJ04095911    AAGJ04020014    HAEJ01014775    SBS55232.1    GCES01130050    JAQ56272.1    KL367508    KFD68106.1    JXUM01109099    KQ565290    KXJ71123.1    OXA55408.1    GDIQ01114015    JAL37711.1    GCES01130483    JAQ55839.1    JXUM01005879    KQ560203    KXJ83865.1    AAGJ04173907    AAGJ04141734    GCES01095441    JAQ90881.1    AAGJ04011066    GCES01096813    JAQ89509.1    AAGJ04008210    GCES01105349    JAQ80973.1    GCES01088038    JAQ98284.1    GCES01112016    JAQ74306.1    ABLF02013940    ABLF02036313    ABLF02066938    ABLF02066950    GBYX01472248    GBYX01472237    GBYX01472235    GBYX01472234    JAO09406.1    JAO09417.1    JAO09419.1    JAO09420.1    GDIQ01071585    JAN23152.1   
Pfam
PF03564   DUF1759        + More
PF05380   Peptidase_A17
PF00665   rve
PF18701   DUF5641
PF17921   Integrase_H2C2
PF05585   DUF1758
PF01565   FAD_binding_4
PF09129   Chol_subst-bind
PF00628   PHD
PF00078   RVT_1
Interpro
IPR040676   DUF5641        + More
IPR036397   RNaseH_sf       
IPR005312   DUF1759       
IPR001584   Integrase_cat-core       
IPR008042   Retrotrans_Pao       
IPR012337   RNaseH-like_sf       
IPR041588   Integrase_H2C2       
IPR008737   Peptidase_asp_put       
IPR001995   Peptidase_A2_cat       
IPR001878   Znf_CCHC       
IPR006094   Oxid_FAD_bind_N       
IPR016166   FAD-bd_PCMH       
IPR016164   FAD-linked_Oxase-like_C       
IPR016170   Cytok_DH_C_sf       
IPR015213   Cholesterol_OX_subst-bd       
IPR036318   FAD-bd_PCMH-like_sf       
IPR016169   FAD-bd_PCMH_sub2       
IPR016167   FAD-bd_PCMH_sub1       
IPR011011   Znf_FYVE_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR001965   Znf_PHD       
IPR019787   Znf_PHD-finger       
IPR019786   Zinc_finger_PHD-type_CS       
IPR000477   RT_dom       
IPR001841   Znf_RING       
IPR000253   FHA_dom       
IPR021109   Peptidase_aspartic_dom_sf       
IPR001969   Aspartic_peptidase_AS       
IPR036875   Znf_CCHC_sf       
SUPFAM
SSF53098   SSF53098        + More
SSF56176   SSF56176       
SSF55103   SSF55103       
SSF57903   SSF57903       
SSF57756   SSF57756       

Ontologies

Topology

Length:
488
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00192
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.00140
outside
1  -  488
 
 

Population Genetic Test Statistics

Pi
297.982317
Theta
169.64786
Tajima's D
1.70901
CLR
0
CSRT
0.831058447077646
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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