Gene

KWMTBOMO03065

Pre Gene Modal

BGIBMGA005751

Annotation

Uncharacterized_protein_OBRU01_18899_[Operophtera_brumata]

Location

Bomo_Chr5(+):16956371-16957781      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.261

CDS

ATGTTCGCTTTGAAACGGTTTCAAAGCTGCCGTTTTAAATTTATACCGAAAATAATCGCGACACAAATTCATAGTCACAGTGTTCTACTTAAATATACAAATGAAGACCATTTAAAACTTAACATCAAAGGAAATGATCTCAAGTTTCCCTTCGTTTGGCTTCGAGACAACTGTCAGTGCGACCAGTGCTTCCACAGAACCGCGAAGAGCAGGATCCTGGATTGGACAAAATTCGACATCAACATCAAGCCAGCAAACGTGGCCCAAGGCGAAAACTCGCTCCAAGTGACCTGGAGTGATGGGCATAAATCAAGTTACGAGTTCGACTGGCTAAAATTCAGGAGCTTCACCCCTGAAAACCAAAAAACATACAAGGACACGATCTTCAGACCGAAAAGGATAACTTGGCATGGTGATGATTTTGAAAACATTTTTAGCAAACACTATTACAATGATATTGTAAAGTCTGAAGAGGCTCTATACAATTGGTTACACCAACTTTCGATTTACGGCGTGGCTCTCATACAGAATACGCCTGCTTCAGAGACAGCTGTGGATAAAATCGTTGACAAGATCGGCTTCACGAAACGAACGCATTATGGGATCAAATTCATAGTCCAGCACGTGGCCAACACTAGCAACGTCGCATACCTGTCCAGCAATTTACAAATGCATACTGATCTACCTTACTACGAATACTGCCCCGGTGTAAACTTATTACACTGTCTAGTTCAAACGGCGAGCAGGGGTGGTGAGAATTTGCTGGTTGATTGTCATTACGTAGCAAATTACATGAAGGAAAACCACCCGGATGAGTATAAAATTTTGACTGACACCGAGGTCGAATGGAACGATATTGGCGAGGAGGATGGAAACGAATTCTACAAACTGAACCGAAGCCCTGTTATCAGCCTTGACAAGCACGGAGAAATAACAAAAATAAATTTCTCTGTAGCTCAGAGGAGCAGCAATCTCCCCGCTCCTTATGAGTCTGTCATACCTTGGTACAAATCTTATGCGCTCTTCCATAACCTTGGTCGAAAGTTCGCAGCGAAATACAAGACACAGGATGGAGATATTTTGGTCTTCGACAATAGAAGGCTACTGCATTCGAGAAGTGCTTACGAAGACAATTCAAACAACGTAAGAAAATTAATAGGTGCCTATGTTGATTGGGACGAAATATACTCGAGATTGCGATGCTTAACAGTTAAATTAAAATATGTCGATGGAATTTTTCAATCAAATCATAGAGGATAA

Protein

MFALKRFQSCRFKFIPKIIATQIHSHSVLLKYTNEDHLKLNIKGNDLKFPFVWLRDNCQCDQCFHRTAKSRILDWTKFDINIKPANVAQGENSLQVTWSDGHKSSYEFDWLKFRSFTPENQKTYKDTIFRPKRITWHGDDFENIFSKHYYNDIVKSEEALYNWLHQLSIYGVALIQNTPASETAVDKIVDKIGFTKRTHYGIKFIVQHVANTSNVAYLSSNLQMHTDLPYYEYCPGVNLLHCLVQTASRGGENLLVDCHYVANYMKENHPDEYKILTDTEVEWNDIGEEDGNEFYKLNRSPVISLDKHGEITKINFSVAQRSSNLPAPYESVIPWYKSYALFHNLGRKFAAKYKTQDGDILVFDNRRLLHSRSAYEDNSNNVRKLIGAYVDWDEIYSRLRCLTVKLKYVDGIFQSNHRG

Uniprot

H9J8A9   A0A2A4JWN7   A0A0L7KY89   A0A2W1BFB3   A0A2H1VQK8   A0A194PVQ1   + More
A0A0N1PFB6   A0A212F7P8   B4L4G0   A0A0L0C500   B4NPQ5   T1PLA0   B4M2P5   Q4V6I6   A0A1I8PS32   Q9VY24   Q4V4S5   A0A0A1WNS4   Q29CR4   B4R4V1   B4JJM9   A0A0K8U6Z2   A0A2J7QXZ4   B4PW58   B3NUZ4   A0A3B0K3D7   A0A2J7QY17   A0A034VZ36   Q17KD9   B4IJ52   B3N1K4   A0A182GU18   A0A1Q3G1F0   A0A1J1IFW2   A0A1B0CGH6   A0A1A9WCL6   A0A1W4VVG6   A0A336MZN0   A0A0M4FA97   A0A336LWW6   A0A067QYH6   A0A084W4S2   A0A182NU35   A0A182Y3J0   A0A1A9ZI90   A0A182W6S7   A0A182J4B3   Q7QKQ0   A0A0L0C4H6   A0A182VC07   Q7Q465   A0A0L0C003   A0A182ICJ6   A0A182R037   A0A182PCM1   A0A1S4GXP8   A0A182UGC9   A0A182XL26   A0A182L117   B4HQH8   A0A1W4V3X5   B4GBY1   B4QED1   Q293B7   A0A1W4WQ40   A0A1Y1LAE9   A0A182F143   A0A1I8M1L9   W5J9V4   B3NRM0   Q7K4A8   A0A1B6E3F2   B4GY47   A0A1I8N4G5   A0A1Y1M8T6   A0A3B0IZZ0   A0A0A1XAY6   B3MGX5   B4KLN0   B4P4I6   A0A0K8WKX0   A0A0M4EU30   T1PBU7   B4J5C9   A0A0A1WSJ0   B4LLY6   E9FXZ1   B4JKU6   A0A2J7QY00   B4N618   A0A034W7R7   B4PXK5   A0A1B6F0H0   W8C2Q3   W8BEY3   A0A1B6HT12   B3P9D5   B4L3T1   B5DL65   B4MD19  

Pubmed

19121390    26227816    28756777    26354079    22118469    17994087    + More
26108605    25315136    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25830018    15632085    17550304    25348373    17510324    26483478    24845553    24438588    25244985    12364791    14747013    17210077    20966253    22936249    28004739    20920257    23761445    21292972    24495485   

EMBL

BABH01027479    NWSH01000470    PCG76196.1    JTDY01004540    KOB68031.1    KZ150087    + More
PZC73762.1    ODYU01003853    SOQ43131.1    KQ459597    KPI95205.1    KQ460970    KPJ10153.1    AGBW02009848    OWR49753.1    CH933810    EDW07438.1    JRES01000902    KNC27458.1    CH964291    EDW86495.1    KA648743    AFP63372.1    CH940651    EDW65949.1    BT022320    AAY54736.1    AE014298    AAF48381.2    AHN59714.1    BT022392    BT022931    AAY54808.1    AAY55347.1    GBXI01013795    JAD00497.1    CH475424    EAL29284.2    CM000366    EDX17908.1    CH916370    EDV99781.1    GDHF01030189    JAI22125.1    NEVH01009371    PNF33452.1    CM000162    EDX01689.1    CH954180    EDV47092.2    OUUW01000015    SPP88714.1    PNF33454.1    GAKP01012149    JAC46803.1    CH477225    EAT47152.1    CH480847    EDW51031.1    CH902660    EDV30113.1    JXUM01018084    JXUM01018085    KQ560501    KXJ82107.1    GFDL01001425    JAV33620.1    CVRI01000047    CRK97926.1    AJWK01011109    UFQS01002653    UFQT01002653    SSX14461.1    SSX33867.1    CP012528    ALC49295.1    UFQT01000244    SSX22300.1    KK852822    KDR15510.1    ATLV01020377    KE525299    KFB45216.1    AAAB01008677    EAA03463.4    JRES01000930    KNC27190.1    AAAB01008964    EAA12352.4    JRES01001171    KNC24799.1    APCN01000803    AXCN02000776    CH480816    EDW47713.1    CH479181    EDW31360.1    CM000362    CM002911    EDX06921.1    KMY93474.1    CM000071    EAL24694.1    GEZM01061252    JAV70604.1    ADMH02001738    ETN61242.1    CH954179    EDV56172.1    AE013599    AY052032    AAF58383.1    AAK93456.1    GEDC01004850    JAS32448.1    CH479196    EDW27674.1    GEZM01037074    JAV82212.1    OUUW01000001    SPP73915.1    GBXI01005823    JAD08469.1    CH902619    EDV37893.1    CH933808    EDW08666.1    CM000158    EDW90625.1    GDHF01000523    JAI51791.1    CP012524    ALC41125.1    KA645585    AFP60214.1    CH916367    EDW01771.1    GBXI01012812    JAD01480.1    CH940648    EDW59906.1    GL732526    EFX88206.1    EDW00199.1    PNF33455.1    CH964154    EDW79807.1    GAKP01007331    JAC51621.1    EDX00858.1    GECZ01026010    GECZ01024192    JAS43759.1    JAS45577.1    GAMC01003064    GAMC01003062    JAC03494.1    GAMC01006660    JAB99895.1    GECU01036603    GECU01029915    JAS71103.1    JAS77791.1    CH954183    EDV45431.1    EDW07209.1    CH379063    EDY72264.1    CH940660    EDW58091.2   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053268    UP000053240    UP000007151    + More
UP000009192    UP000037069    UP000007798    UP000095301    UP000008792    UP000095300    UP000000803    UP000001819    UP000000304    UP000001070    UP000235965    UP000002282    UP000008711    UP000268350    UP000008820    UP000001292    UP000007801    UP000069940    UP000249989    UP000183832    UP000092461    UP000091820    UP000192221    UP000092553    UP000027135    UP000030765    UP000075884    UP000076408    UP000092445    UP000075920    UP000075880    UP000007062    UP000075903    UP000075840    UP000075886    UP000075885    UP000075902    UP000076407    UP000075882    UP000008744    UP000192223    UP000069272    UP000000673    UP000000305   

PRIDE

H9J8A9    Q4V6I6    Q9VY24    Q4V4S5    Q7K4A8   

Pfam

PF02668   TauD        + More
PF06155   DUF971

Interpro

IPR038492   GBBH-like_N_sf        + More
IPR003819   TauD/TfdA-like       
IPR010376   GBH-like_N       
IPR042098   TauD-like_sf       

Gene 3D

3.30.2020.30     3.60.130.10    

ProteinModelPortal

H9J8A9   A0A2A4JWN7   A0A0L7KY89   A0A2W1BFB3   A0A2H1VQK8   A0A194PVQ1   + More
A0A0N1PFB6   A0A212F7P8   B4L4G0   A0A0L0C500   B4NPQ5   T1PLA0   B4M2P5   Q4V6I6   A0A1I8PS32   Q9VY24   Q4V4S5   A0A0A1WNS4   Q29CR4   B4R4V1   B4JJM9   A0A0K8U6Z2   A0A2J7QXZ4   B4PW58   B3NUZ4   A0A3B0K3D7   A0A2J7QY17   A0A034VZ36   Q17KD9   B4IJ52   B3N1K4   A0A182GU18   A0A1Q3G1F0   A0A1J1IFW2   A0A1B0CGH6   A0A1A9WCL6   A0A1W4VVG6   A0A336MZN0   A0A0M4FA97   A0A336LWW6   A0A067QYH6   A0A084W4S2   A0A182NU35   A0A182Y3J0   A0A1A9ZI90   A0A182W6S7   A0A182J4B3   Q7QKQ0   A0A0L0C4H6   A0A182VC07   Q7Q465   A0A0L0C003   A0A182ICJ6   A0A182R037   A0A182PCM1   A0A1S4GXP8   A0A182UGC9   A0A182XL26   A0A182L117   B4HQH8   A0A1W4V3X5   B4GBY1   B4QED1   Q293B7   A0A1W4WQ40   A0A1Y1LAE9   A0A182F143   A0A1I8M1L9   W5J9V4   B3NRM0   Q7K4A8   A0A1B6E3F2   B4GY47   A0A1I8N4G5   A0A1Y1M8T6   A0A3B0IZZ0   A0A0A1XAY6   B3MGX5   B4KLN0   B4P4I6   A0A0K8WKX0   A0A0M4EU30   T1PBU7   B4J5C9   A0A0A1WSJ0   B4LLY6   E9FXZ1   B4JKU6   A0A2J7QY00   B4N618   A0A034W7R7   B4PXK5   A0A1B6F0H0   W8C2Q3   W8BEY3   A0A1B6HT12   B3P9D5   B4L3T1   B5DL65   B4MD19  

PDB

4C5W     E-value=6.46281e-58,     Score=568

KEGG

101743493    K00471 gamma-butyrobetaine dioxygenase [EC:1.14.11.1] | (RefSeq) gamma-butyrobetaine dioxygenase

PATHWAY

00310    Lysine degradation - Bombyx mori (domestic silkworm)

GO

GO:0016491   GO:0051213   GO:0008336   GO:0005739   GO:0016702   GO:0045329   GO:0030151   GO:0042128   GO:0043546   GO:0020037   GO:0016020   GO:0051103   GO:0003677   GO:0006281   GO:0048384   GO:0055114  

Length:

419

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00804

Exp number, first 60 AAs:

0.00295

Total prob of N-in:

0.00607

outside

1  -  419

 

 

Pi

291.736591

Theta

233.655224

Tajima's D

0.782882

CLR

1.997685

CSRT

0.597070146492675

Interpretation

Uncertain