Gene

KWMTBOMO03056  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005748

Annotation

PREDICTED:_gamma-1-syntrophin_[Bombyx_mori]

Location

Bomo_Chr5(+):16666461-16671255      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.665 Nuclear   Reliability : 1.597

CDS

ATGATGACGCCGATAGAGGAGAAGAAAGATGAAAAGATACGCACAGGAATGGTGCAGGTGTCGGATGGGAAGTCCCGTCCACGGCCTGCACGGCTTTTACTTACCATGGACGCGGTGACCATCCAGAGAGAGGCACCTGTGCCCATATTACCACCAAAAGACAAAAATGTGCCTCACGCTAGGGAGCGGATGGTACAAATTACCAGGCAGAAAGTTGGTGGTCTTGGCCTCAGCATCAAGGGAGGTTCAGAACATAAACTGCCAATATTAATCTCAAAGATATACAAGGACCAAGCTGCTGATCAGACAGGACAACTTTTTGTTGGAGATGCTGTAATTAAAGGTAATTTAACAAGTACTTGTACCATATTTTTTTATGCTTAG

Protein

MMTPIEEKKDEKIRTGMVQVSDGKSRPRPARLLLTMDAVTIQREAPVPILPPKDKNVPHARERMVQITRQKVGGLGLSIKGGSEHKLPILISKIYKDQAADQTGQLFVGDAVIKGNLTSTCTIFFYA

Similarity

Belongs to the mitochondrial carrier (TC 2.A.29) family.

Uniprot

H9J8A6   A0A2A4J729   A0A2H1W791   A0A0N0PBB7   A0A194PVQ7   A0A1A9YKY6   + More
A0A1B0DAA1   A0A0L0BNX1   A0A1I8MF54   W8BHR8   A0A0A1X8M1   A0A0K8VH69   V5GLW5   A0A1B0B3H4   A0A0K8W9G5   A0A2M4BK76   D6W7Q2   A0A182FE98   A0A2M4CPD3   N6TT16   A0A1A9VSN7   A0A1I8PJ89   A0A1I8PIY3   A0A182HB77   A0A023EUF5   Q16GC9   A0A1B0FKQ0   A0A1A9WR78   B3MFQ4   A0A087ZUY4   A0A026WQP4   B4MPH6   A0A151I949   A0A0C9RNC1   Q0E952   B4LMF1   B4KSI4   A0A2A3E8X9   A0A182LRP4   A0A182J981   A0A3L8DMP0   A0A084WMG4   B4HSZ3   A0A0R1DY73   A0A0J9RED0   Q8SX22   A0A195EX22   A0A1W4UYP1   A0A0J9RFD3   B4P657   A1ZAH3   A0A158NNW7   A0A0Q5VZR4   A0A1W4UYC3   D3PFI3   E3CTN9   B3NPH5   B4QI03   B4K380   B4J7G9   A0A023F148   A0A1Q3FVV2   A0A0A9WC68   A0A182UYP0   Q7PPA0   A0A182I4L2   A0A182NI74   A0A182X4L5   A0A182Y2H4   A0A182R980   A0A182WBN4   W5JMY3   A0A3B0JQN0   B4GA94   Q291U2   A0A1L8E3R3   A0A182TGX4   A7UUG4   T1ID62   A0A1L8E3F6   A0A0M4EV41   A0A1B6D4W2   A0A1W4X3S4   Q9GT68   A0A182QFJ9   A0A0T6AYZ3   A0A232F6G4   A0A1B6HUC8   A0A1Y1LY32   T1E1X1   A0A0L7QS01   A0A1B0AB20   A0A0M8ZU42   A0A154PR79   E2AEK9   A0A151IWX3   A0A195BRW9   A0A067RRM7   A0A087U9L1   A0A336MS73  

Pubmed

19121390    26354079    26108605    25315136    24495485    25830018    + More
18362917    19820115    23537049    26483478    24945155    17510324    17994087    24508170    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    18057021    30249741    24438588    17550304    22936249    26109357    26109356    21347285    25474469    25401762    12364791    14747013    17210077    25244985    20920257    23761445    15632085    23185243    11018515    28648823    28004739    24330624    20798317    24845553   

EMBL

BABH01027508    BABH01027509    BABH01027510    NWSH01002784    PCG67536.1    ODYU01006475    + More
SOQ48344.1    KQ460970    KPJ10148.1    KQ459597    KPI95210.1    AJVK01028945    JRES01001695    KNC20914.1    GAMC01010073    GAMC01010072    JAB96483.1    GBXI01006830    JAD07462.1    GDHF01014409    JAI37905.1    GALX01005869    JAB62597.1    JXJN01007856    GDHF01004481    JAI47833.1    GGFJ01004335    MBW53476.1    KQ971307    EFA11248.1    GGFL01002951    MBW67129.1    APGK01020125    KB740167    KB631669    ENN81198.1    ERL85165.1    JXUM01124356    JXUM01124357    JXUM01124358    JXUM01124359    JXUM01124360    KQ566823    KXJ69811.1    GAPW01001021    JAC12577.1    CH478293    EAT33296.1    CCAG010001145    CCAG010001146    CCAG010001147    CH902619    EDV37744.1    KK107128    EZA58350.1    CH963849    EDW74015.1    KQ978303    KYM95335.1    GBYB01014992    JAG84759.1    AE013599    AAM68502.1    CH940648    EDW62046.2    KRF80401.1    KRF80402.1    KRF80403.1    CH933808    EDW09489.1    KZ288345    PBC27649.1    AXCM01008843    QOIP01000006    RLU21690.1    ATLV01024447    ATLV01024448    KE525352    KFB51408.1    CH480816    EDW48157.1    CM000158    KRK00202.1    CM002911    KMY94285.1    KMY94286.1    AY094895    AAF57987.2    AAM11248.1    AAM68501.1    KQ981953    KYN32429.1    KMY94284.1    EDW91907.2    BT132953    AAO41368.1    AEW43893.1    ADTU01021859    ADTU01021860    CH954179    KQS62449.1    KQS62450.1    BT120389    ADD16469.1    BT125705    ADO33196.1    EDV55742.2    CM000362    EDX07374.1    CH921126    EDW04458.1    CH916367    EDW01093.1    GBBI01003470    JAC15242.1    GFDL01003304    JAV31741.1    GBHO01037572    JAG06032.1    AAAB01008960    EAA10804.4    APCN01002317    ADMH02000584    ETN65737.1    OUUW01000001    SPP73458.1    CH479181    EDW31846.1    CM000071    EAL25020.1    KRT01799.1    GFDF01000810    JAV13274.1    EDO63942.1    ACPB03022052    GFDF01000811    JAV13273.1    CP012524    ALC41675.1    GEDC01016567    GEDC01009604    JAS20731.1    JAS27694.1    AF277389    AAG17398.1    AXCN02000484    LJIG01022578    KRT79831.1    NNAY01000802    OXU26434.1    GECU01029428    JAS78278.1    GEZM01046912    JAV76965.1    GALA01001695    JAA93157.1    KQ414766    KOC61402.1    KQ435845    KOX71185.1    KQ435007    KZC13620.1    GL438870    EFN68132.1    KQ980843    KYN12314.1    KQ976417    KYM89760.1    KK852465    KDR23305.1    KK118861    KFM74050.1    UFQT01002209    SSX32930.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000092443    UP000092462    + More
UP000037069    UP000095301    UP000092460    UP000007266    UP000069272    UP000019118    UP000030742    UP000078200    UP000095300    UP000069940    UP000249989    UP000008820    UP000092444    UP000091820    UP000007801    UP000005203    UP000053097    UP000007798    UP000078542    UP000000803    UP000008792    UP000009192    UP000242457    UP000075883    UP000075880    UP000279307    UP000030765    UP000001292    UP000002282    UP000078541    UP000192221    UP000005205    UP000008711    UP000000304    UP000001070    UP000075903    UP000007062    UP000075840    UP000075884    UP000076407    UP000076408    UP000075900    UP000075920    UP000000673    UP000268350    UP000008744    UP000001819    UP000075902    UP000015103    UP000092553    UP000192223    UP000075886    UP000215335    UP000053825    UP000092445    UP000053105    UP000076502    UP000000311    UP000078492    UP000078540    UP000027135    UP000054359   

PRIDE

H9J8A6    Q0E952    Q8SX22    A1ZAH3    Q9GT68   

Pfam

PF00595   PDZ        + More
PF00083   Sugar_tr
PF00153   Mito_carr

Interpro

IPR036034   PDZ_sf        + More
IPR015482   Syntrophin       
IPR001478   PDZ       
IPR011993   PH-like_dom_sf       
IPR001849   PH_domain       
IPR005828   MFS_sugar_transport-like       
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR023395   Mt_carrier_dom_sf       
IPR018108   Mitochondrial_sb/sol_carrier       

SUPFAM

SSF50156   SSF50156        + More
SSF103473   SSF103473       
SSF103506   SSF103506       

Gene 3D

2.30.29.30     1.50.40.10    

CDD

cd06174  MFS

ProteinModelPortal

H9J8A6   A0A2A4J729   A0A2H1W791   A0A0N0PBB7   A0A194PVQ7   A0A1A9YKY6   + More
A0A1B0DAA1   A0A0L0BNX1   A0A1I8MF54   W8BHR8   A0A0A1X8M1   A0A0K8VH69   V5GLW5   A0A1B0B3H4   A0A0K8W9G5   A0A2M4BK76   D6W7Q2   A0A182FE98   A0A2M4CPD3   N6TT16   A0A1A9VSN7   A0A1I8PJ89   A0A1I8PIY3   A0A182HB77   A0A023EUF5   Q16GC9   A0A1B0FKQ0   A0A1A9WR78   B3MFQ4   A0A087ZUY4   A0A026WQP4   B4MPH6   A0A151I949   A0A0C9RNC1   Q0E952   B4LMF1   B4KSI4   A0A2A3E8X9   A0A182LRP4   A0A182J981   A0A3L8DMP0   A0A084WMG4   B4HSZ3   A0A0R1DY73   A0A0J9RED0   Q8SX22   A0A195EX22   A0A1W4UYP1   A0A0J9RFD3   B4P657   A1ZAH3   A0A158NNW7   A0A0Q5VZR4   A0A1W4UYC3   D3PFI3   E3CTN9   B3NPH5   B4QI03   B4K380   B4J7G9   A0A023F148   A0A1Q3FVV2   A0A0A9WC68   A0A182UYP0   Q7PPA0   A0A182I4L2   A0A182NI74   A0A182X4L5   A0A182Y2H4   A0A182R980   A0A182WBN4   W5JMY3   A0A3B0JQN0   B4GA94   Q291U2   A0A1L8E3R3   A0A182TGX4   A7UUG4   T1ID62   A0A1L8E3F6   A0A0M4EV41   A0A1B6D4W2   A0A1W4X3S4   Q9GT68   A0A182QFJ9   A0A0T6AYZ3   A0A232F6G4   A0A1B6HUC8   A0A1Y1LY32   T1E1X1   A0A0L7QS01   A0A1B0AB20   A0A0M8ZU42   A0A154PR79   E2AEK9   A0A151IWX3   A0A195BRW9   A0A067RRM7   A0A087U9L1   A0A336MS73  

PDB

1Z87     E-value=7.65429e-12,     Score=163

KEGG

101743922    no KO assigned | (RefSeq) gamma-1-syntrophin

GO

GO:0005198   GO:0016010   GO:0008582   GO:0040011   GO:0042052   GO:0008307   GO:0001654   GO:0016013   GO:0008092   GO:0016021   GO:0022857   GO:0005515   GO:0003677   GO:0008270   GO:0006414   GO:0016020   GO:0051103   GO:0006281   GO:0048384  

PANTHER

PTHR10554  

Length:

127

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.1904

Exp number, first 60 AAs:

0

Total prob of N-in:

0.30767

outside

1  -  127

 

 

Pi

201.773904

Theta

169.846973

Tajima's D

0.886442

CLR

0.156124

CSRT

0.630468476576171

Interpretation

Uncertain