Gene

KWMTBOMO03049

Pre Gene Modal

BGIBMGA005746

Annotation

PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]

Location

Bomo_Chr5(+):16556751-16576789      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.643

CDS

ATGAGGACACAGGCTGTGGTGTGGCAAGATTGGCAAGTTCACGTGACGTCAACGTCAGCAGAGGCGGGAGGCCCGGCGCTCCTCACCTGCACCACTCCAGCCCCGATGAAGGATCACGCGTCGGTAGCCGCCTGGTACAGAGACGACGAAGTTCTGCCATCTTCAGATCACCTTTCCGGTCCCACGCTGCTAGTGGATGAAGGTTGGAAGATGATAGTGCGTTCCGTCCGCTTGGAAGACTCCCGGGCCAAATATTCCTGTTCAGTTCTGGACTCGCTGACGGGAGAACGAAGACGGAGTAACCCTGTCAATATTGAAGTATCTCCAGTTACCGTGTCTTCAGCTCCTCACGCCGTTTCGCATGGTCAGTGGGAAGCTAGCGTGCGAAGAGGCGGCGACATAGTCCTACCGTGTATGGTGCATGCGAACCCGCCACCAACGATCACGTAA

Protein

MRTQAVVWQDWQVHVTSTSAEAGGPALLTCTTPAPMKDHASVAAWYRDDEVLPSSDHLSGPTLLVDEGWKMIVRSVRLEDSRAKYSCSVLDSLTGERRRSNPVNIEVSPVTVSSAPHAVSHGQWEASVRRGGDIVLPCMVHANPPPTIT

Uniprot

A0A2H1VVG0   A0A2W1BND6   H9J8A4   A0A0L7KUR8   A0A0N0PBJ4   A0A194PPH5   + More
A0A212F6C4   A0A1A9WNS7   A0A1A9ZZV3   A0A1B0FNH0   A0A0P8XZR3   B3LVQ3   A0A1A9UEN6   B4N9U7   A0A1A9X9W9   B4JTV0   A0A1W4UT57   A0A1W4USR1   A0A0R3NK49   A0A0R3NGP1   Q29A88   A0A0R3NGB7   A0A0R3NG76   B4G2L9   A0A1W4V5H6   A0A3B0KAQ1   B4QVP9   A0A0M4ETQ6   A0A0Q9WGA5   W8BHF6   A0A0Q9WFX9   B4LY43   Q6IDE9   Q9VEJ5   A0A0R1E3C0   Q7KSE9   B4PVB9   A0A0R1E506   B4K7M7   A8JR35   B3P3D4   B4IBG9   A0A0Q9X715   A0A0Q9X218   A0A1I8Q177   A0A1I8Q183   A0A1I8Q151   A0A0L0C0J5   A0A1I8N7N2   A0A336M8I3   A0A154NY75   A0A195EYM2   A0A026VYJ5   A0A151IA46   A0A151JRW6   E2A3Y9   E2BK49   A0A232F8U8   A0A088APY9   K7J3G0   A0A195BJQ9   A0A158NJC3   A0A2A4JJF9   A0A0L7R8H0   A0A182UN68   A0A212F7U9   A0A2W1BN39   W5JR02   A0A182XEU9   A0A182QYC3   A0A1Y9GLM1   Q7Q9I6   A0A084WCP8   A0A1S4FT36   Q16QI5   A0A182J4M0   A0A182RKW3   A0A182M182   A0A1W7R6Y5   A0A182WK19   A0A182P8T1   A0A1J1HP71   A0A182NQ64   A0A182LBP1   A0A159W474   T1IV67   A0A2U7QUZ7   A0A1B6DNT1   T1JCN0   A0A182FCX3   A0A0N0BC89   A0A2U7QYT8   A0A2S2R5A3   T1J837   J9JNA7   A0A2J7PZP0   A0A344AR44   H9IXE0  

Pubmed

28756777    19121390    26227816    26354079    22118469    17994087    + More
15632085    23185243    24495485    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    26108605    25315136    24508170    20798317    28648823    20075255    21347285    20920257    23761445    12364791    24438588    17510324    20966253    27080167   

EMBL

ODYU01004667    SOQ44798.1    KZ149956    PZC76468.1    BABH01027516    JTDY01005624    + More
KOB66811.1    KQ460970    KPJ10146.1    KQ459597    KPI95212.1    AGBW02010047    OWR49292.1    CCAG010010693    CCAG010010694    CCAG010010695    CCAG010010696    CCAG010010697    CH902617    KPU80416.1    EDV43677.1    CH964232    EDW80662.2    CH916374    EDV91529.1    CM000070    KRT00047.1    KRT00044.1    EAL27462.3    KRT00043.1    KRT00045.1    KRT00046.1    KRT00048.1    KRT00049.1    CH479179    EDW24064.1    OUUW01000005    SPP80648.1    CM000364    EDX12562.1    CP012526    ALC46292.1    CH940650    KRF83565.1    GAMC01005845    JAC00711.1    KRF83564.1    EDW67931.1    BT014656    AE014297    AAT27280.1    ABW08697.1    AAF55426.3    CM000160    KRK02723.1    AAS65164.2    EDW95788.2    KRK02725.1    KRK02724.1    CH933806    EDW15371.2    ABW08696.1    CH954181    EDV48714.1    CH480827    EDW44727.1    KRG01530.1    KRG01529.1    JRES01001161    KNC24949.1    UFQS01000550    UFQT01000550    SSX04800.1    SSX25163.1    KQ434782    KZC04573.1    KQ981920    KYN32984.1    KK107570    EZA48842.1    KQ978255    KYM95887.1    KQ978579    KYN30034.1    GL436519    EFN71841.1    GL448740    EFN83957.1    NNAY01000640    OXU27246.1    KQ976453    KYM85408.1    ADTU01017524    ADTU01017525    ADTU01017526    ADTU01017527    ADTU01017528    ADTU01017529    ADTU01017530    ADTU01017531    ADTU01017532    ADTU01017533    NWSH01001363    PCG71543.1    KQ414632    KOC67128.1    AGBW02009825    OWR49816.1    PZC76469.1    ADMH02000362    ETN66827.1    AXCN02001019    AXCN02001020    APCN01002803    APCN01002804    APCN01002805    APCN01002806    APCN01002807    AAAB01008900    EAA09501.4    ATLV01022806    ATLV01022807    ATLV01022808    ATLV01022809    ATLV01022810    ATLV01022811    KE525337    KFB47992.1    CH477747    EAT36655.1    AXCM01004495    AXCM01004496    GEHC01000744    JAV46901.1    CVRI01000006    CRK88017.1    KT932414    AMW93209.1    JH431575    MF106031    AUY61853.1    GEDC01009966    JAS27332.1    JH432069    KQ435922    KOX68634.1    MF106045    AUY61867.1    GGMS01016006    MBY85209.1    JH431948    ABLF02040815    ABLF02040826    NEVH01020333    PNF21807.1    MF066901    AWX42180.1    BABH01018019    BABH01018020   

Proteomes

UP000005204    UP000037510    UP000053240    UP000053268    UP000007151    UP000091820    + More
UP000092445    UP000092444    UP000007801    UP000078200    UP000007798    UP000092443    UP000001070    UP000192221    UP000001819    UP000008744    UP000268350    UP000000304    UP000092553    UP000008792    UP000000803    UP000002282    UP000009192    UP000008711    UP000001292    UP000095300    UP000037069    UP000095301    UP000076502    UP000078541    UP000053097    UP000078542    UP000078492    UP000000311    UP000008237    UP000215335    UP000005203    UP000002358    UP000078540    UP000005205    UP000218220    UP000053825    UP000075903    UP000000673    UP000076407    UP000075886    UP000075840    UP000007062    UP000030765    UP000008820    UP000075880    UP000075900    UP000075883    UP000075920    UP000075885    UP000183832    UP000075884    UP000075882    UP000069272    UP000053105    UP000007819    UP000235965   

PRIDE

H9J8A4    Q6IDE9    Q9VEJ5    Q7KSE9    H9IXE0   

Pfam

PF07679   I-set        + More
PF00041   fn3
PF00047   ig
PF10523   BEN
PF00069   Pkinase
PF07707   BACK
PF01344   Kelch_1
PF00651   BTB

Interpro

IPR036179   Ig-like_dom_sf        + More
IPR013783   Ig-like_fold       
IPR007110   Ig-like_dom       
IPR036116   FN3_sf       
IPR013098   Ig_I-set       
IPR003599   Ig_sub       
IPR003961   FN3_dom       
IPR003598   Ig_sub2       
IPR013106   Ig_V-set       
IPR013151   Immunoglobulin       
IPR027413   GROEL-like_equatorial_sf       
IPR018379   BEN_domain       
IPR013087   Znf_C2H2_type       
IPR033027   DSCAM_chordates       
IPR011333   SKP1/BTB/POZ_sf       
IPR000210   BTB/POZ_dom       
IPR017441   Protein_kinase_ATP_BS       
IPR006652   Kelch_1       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR015915   Kelch-typ_b-propeller       
IPR000719   Prot_kinase_dom       
IPR011705   BACK       

SUPFAM

SSF48726   SSF48726        + More
SSF49265   SSF49265       
SSF48592   SSF48592       
SSF54695   SSF54695       
SSF117281   SSF117281       
SSF56112   SSF56112       

Gene 3D

2.60.40.10     1.10.560.10     2.120.10.80    

CDD

cd00063  FN3

ProteinModelPortal

A0A2H1VVG0   A0A2W1BND6   H9J8A4   A0A0L7KUR8   A0A0N0PBJ4   A0A194PPH5   + More
A0A212F6C4   A0A1A9WNS7   A0A1A9ZZV3   A0A1B0FNH0   A0A0P8XZR3   B3LVQ3   A0A1A9UEN6   B4N9U7   A0A1A9X9W9   B4JTV0   A0A1W4UT57   A0A1W4USR1   A0A0R3NK49   A0A0R3NGP1   Q29A88   A0A0R3NGB7   A0A0R3NG76   B4G2L9   A0A1W4V5H6   A0A3B0KAQ1   B4QVP9   A0A0M4ETQ6   A0A0Q9WGA5   W8BHF6   A0A0Q9WFX9   B4LY43   Q6IDE9   Q9VEJ5   A0A0R1E3C0   Q7KSE9   B4PVB9   A0A0R1E506   B4K7M7   A8JR35   B3P3D4   B4IBG9   A0A0Q9X715   A0A0Q9X218   A0A1I8Q177   A0A1I8Q183   A0A1I8Q151   A0A0L0C0J5   A0A1I8N7N2   A0A336M8I3   A0A154NY75   A0A195EYM2   A0A026VYJ5   A0A151IA46   A0A151JRW6   E2A3Y9   E2BK49   A0A232F8U8   A0A088APY9   K7J3G0   A0A195BJQ9   A0A158NJC3   A0A2A4JJF9   A0A0L7R8H0   A0A182UN68   A0A212F7U9   A0A2W1BN39   W5JR02   A0A182XEU9   A0A182QYC3   A0A1Y9GLM1   Q7Q9I6   A0A084WCP8   A0A1S4FT36   Q16QI5   A0A182J4M0   A0A182RKW3   A0A182M182   A0A1W7R6Y5   A0A182WK19   A0A182P8T1   A0A1J1HP71   A0A182NQ64   A0A182LBP1   A0A159W474   T1IV67   A0A2U7QUZ7   A0A1B6DNT1   T1JCN0   A0A182FCX3   A0A0N0BC89   A0A2U7QYT8   A0A2S2R5A3   T1J837   J9JNA7   A0A2J7PZP0   A0A344AR44   H9IXE0  

PDB

4X83     E-value=7.18422e-08,     Score=130

KEGG

105841292    no KO assigned | (RefSeq) Down syndrome cell adhesion molecule-like protein Dscam2

GO

GO:0016021   GO:0042802   GO:0005887   GO:0007156   GO:0003676   GO:0004672   GO:0005524   GO:0005515   GO:0003677   GO:0008270   GO:0006414   GO:0016020   GO:0051103   GO:0006281   GO:0048384  

PANTHER

PTHR10075:SF51  

Length:

149

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01448

Exp number, first 60 AAs:

0.01359

Total prob of N-in:

0.43780

outside

1  -  149

 

 

Pi

231.590797

Theta

161.525867

Tajima's D

1.601313

CLR

0.46917

CSRT

0.806859657017149

Interpretation

Uncertain