Gene

KWMTBOMO03047  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005826

Annotation

PREDICTED:_15-hydroxyprostaglandin_dehydrogenase_[NAD(+)]-like?_partial_[Bombyx_mori]

Location

Bomo_Chr5(-):16466478-16467717      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.472 Mitochondrial   Reliability : 1.133

CDS

ATGAAATTACTTCTATTTCTGGTACTCGCCATCTCTGCATACCGGTGCTTTGGCTACCCAAGAAAACCAATAGATTCTCAATACGAAGTGAAAAACAAAGTGATTATTGTTACTGGAGCAGCTCGAGGTATTGGTTATGCAATAGCCGATAATTTTCTCGATAAGGGAGCAAAGATCATAATCATACTAGATATCGATTTGCCAAAAGGACGAGACGCCGCGGCAACTTTAAATGCAAAATACGGAAAGAACAGCGCAGTTTTCATCAAGTGTGATGTCACGAAAGATCTAGATGAAGTCTCCCGACTAATCTTAAAGAACTACGATGTAGATATTTTGGTAAATTGCGCAGGAGTGGTCGACGAATTTGATCCTAGAAAGACGTTGACGACAAACTCAATAGCTCTTATCGAATGGTCCCTTAAGTTCAGAGAGTGCATGAGAAAAGACAATGGTGGAAAAGGCGGAACCATTATCAACATTTCTTCTATATACGGGTATACAATAGACCCGTTCTTGGTTTCGTATAAGGCGTCAAAGTTTGCTGTCTTAGGGTTTTCCAAATCACTGGGTCATGAATTGAACTACAAGATTACTGGAGTCAGGGTGCTCGTTATATGTCCCGGTGCTACAGATACAAGATTGGCAAAGAACGTTAAGGTATTCCCCGAACACAACGAGCTATTCACAAGGTCCACAGACAAAGCACAAAAGCAGAGTGCAGATGCCGTTGGTAGGGGAGTCGTGGAAGTTTACAAGTCAGCTAAAACAGGTACGGCTTGGGACATTATTGGGGGGAGACCCCCTGTTGAATCGCCTCTTGCAGCGTACACTTCCACGAAAGAAATCTTGGAAAGTTAA

Protein

MKLLLFLVLAISAYRCFGYPRKPIDSQYEVKNKVIIVTGAARGIGYAIADNFLDKGAKIIIILDIDLPKGRDAAATLNAKYGKNSAVFIKCDVTKDLDEVSRLILKNYDVDILVNCAGVVDEFDPRKTLTTNSIALIEWSLKFRECMRKDNGGKGGTIINISSIYGYTIDPFLVSYKASKFAVLGFSKSLGHELNYKITGVRVLVICPGATDTRLAKNVKVFPEHNELFTRSTDKAQKQSADAVGRGVVEVYKSAKTGTAWDIIGGRPPVESPLAAYTSTKEILES

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9J8I4   H9J8I5   Q1HPX6   H9J8I9   H9J8J0   A0A2H1VNC8   + More
A0A2W1BR60   A0A1L8D6N5   H9J8I6   A0A194R949   A0A0F6Q0W0   A0A194R584   A0A0L7LJP6   A0A0H4TDA9   A0A2W1BL60   A0A0F6Q2J9   A0A0H4TD16   H9J369   A0A0L7KQW0   A0A2A4JIR0   H9JWW1   A0A2W1BSK9   A0A0F6Q0X5   H9JWW0   A0A212F911   D2SNK3   H9JYK0   A0A194QJQ6   H9JWW7   S4PIB4   A0A212F936   A0A194R3L5   A0A194R4F0   I4DKW3   U5KC20   A0A0H4TH26   H9JWW6   A0A2H1VSR5   A0A0F6Q4H7   A0A2H1VR53   H9J355   H9J354   A0A0L7K2F9   A0A2A4JJW8   A0A158NDP0   A0A194QRC6   A0A194QQX1   A0A0J7NFD4   A0A151WLU8   A0A151XEI7   A0A212F0G1   H9J0A6   A0A3G1T1B2   B0XI43   A0A1L8D6X2   A0A0J7L0X1   A0A232EGH1   A0A076FT24   A0A158NZK6   A0A0P4WG45   A0A195B6A6   A0A194Q8J5   A0A195BP85   A0A139WKA8   K7IV86   B0XCJ3   B0XI42   A0A194QE27   A0A195ET92   A0A023F7A3   F4W474   A0A195CI97   A0A0F6Q4J7   H9J0A8   A0A151XEU9   A0A026WRA5   H9J0A4   A0A195F4X3   A0A195CN33   A0A1S4G7W1   A0A1Y1LZE8   A0A088A4Z9   A0A151X1L8   A0A0L7QT43   E9IVH7   A0A154PCJ3   J9HTP4   H9J0A5   J9EB03   J9HJE4   A0A182GQQ8   V9IG12   A0A195EK98  

Pubmed

19121390    28756777    26354079    26227816    22118469    20074338    + More
23622113    22651552    24053512    21347285    28648823    24817326    18362917    19820115    20075255    25474469    21719571    24508170    30249741    17510324    28004739    21282665    26483478   

EMBL

BABH01027525    BABH01027529    BABH01027530    DQ443276    ABF51365.1    BABH01027538    + More
ODYU01003471    SOQ42306.1    KZ149989    PZC75627.1    GEYN01000013    JAV02116.1    BABH01027533    KQ460779    KPJ12396.1    KP237884    AKD01737.1    KPJ12400.1    JTDY01000876    KOB75589.1    KP899549    AKQ06148.1    PZC75628.1    KP237873    AKD01726.1    KP899551    AKQ06150.1    BABH01036649    JTDY01007189    KOB65394.1    NWSH01001322    PCG71699.1    BABH01043464    PZC75626.1    KP237899    AKD01752.1    BABH01043465    AGBW02009651    OWR50236.1    EZ407131    ACX53694.1    BABH01044234    KQ459144    KPJ03686.1    BABH01040078    GAIX01005455    JAA87105.1    OWR50237.1    KPJ12398.1    KPJ12399.1    AK401931    BAM18553.1    KPJ03685.1    KC007343    AGQ45608.1    KP899550    AKQ06149.1    ODYU01003911    SOQ43254.1    KP237875    AKD01728.1    SOQ43256.1    BABH01036642    JTDY01017041    KOB51868.1    PCG71700.1    ADTU01012731    KQ461175    KPJ07894.1    KPJ07892.1    LBMM01005734    KMQ91250.1    KQ982944    KYQ48859.1    KQ982254    KYQ58773.1    AGBW02011082    OWR47236.1    BABH01019209    MG846919    AXY94771.1    DS233256    EDS28983.1    GEYN01000012    JAV02117.1    LBMM01001364    KMQ96442.1    NNAY01004765    OXU17447.1    KF960797    AII21999.1    ADTU01004714    GDRN01065431    JAI64685.1    KQ976587    KYM79714.1    KQ459302    KPJ01719.1    KQ976424    KYM88327.1    KQ971329    KYB28353.1    AAZX01008191    DS232698    EDS44855.1    EDS28982.1    KPJ01716.1    KQ981979    KYN31470.1    GBBI01001633    JAC17079.1    GL887491    EGI71070.1    KQ977720    KYN00433.1    KP237895    AKD01748.1    BABH01019210    KYQ58798.1    KK107119    QOIP01000009    EZA58570.1    RLU18591.1    BABH01019201    BABH01019202    KQ981820    KYN35129.1    KQ977600    KYN01499.1    GEZM01045515    JAV77770.1    KQ982585    KYQ54299.1    KQ414755    KOC61724.1    GL766234    EFZ15444.1    KQ434870    KZC09507.1    CH477964    EJY58013.1    BABH01019208    CH477766    EJY57916.1    EJY58014.1    JXUM01081117    KQ563228    KXJ74247.1    JR045632    AEY60015.1    KQ978747    KYN28685.1   

Proteomes

UP000005204    UP000053240    UP000037510    UP000218220    UP000007151    UP000053268    + More
UP000005205    UP000036403    UP000075809    UP000002320    UP000215335    UP000078540    UP000007266    UP000002358    UP000078541    UP000007755    UP000078542    UP000053097    UP000279307    UP000005203    UP000053825    UP000076502    UP000008820    UP000069940    UP000249989    UP000078492   

PRIDE

H9J8I4    H9J8I5    Q1HPX6    H9J8I9    H9J8J0    H9J8I6    + More
H9J369    H9JWW1    H9JWW0    H9JYK0    H9JWW7    H9JWW6    H9J355    H9J354    H9J0A6    H9J0A8    H9J0A4    H9J0A5   

Pfam

PF00106   adh_short

Interpro

IPR002347   SDR_fam        + More
IPR036291   NAD(P)-bd_dom_sf       
IPR020904   Sc_DH/Rdtase_CS       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

H9J8I4   H9J8I5   Q1HPX6   H9J8I9   H9J8J0   A0A2H1VNC8   + More
A0A2W1BR60   A0A1L8D6N5   H9J8I6   A0A194R949   A0A0F6Q0W0   A0A194R584   A0A0L7LJP6   A0A0H4TDA9   A0A2W1BL60   A0A0F6Q2J9   A0A0H4TD16   H9J369   A0A0L7KQW0   A0A2A4JIR0   H9JWW1   A0A2W1BSK9   A0A0F6Q0X5   H9JWW0   A0A212F911   D2SNK3   H9JYK0   A0A194QJQ6   H9JWW7   S4PIB4   A0A212F936   A0A194R3L5   A0A194R4F0   I4DKW3   U5KC20   A0A0H4TH26   H9JWW6   A0A2H1VSR5   A0A0F6Q4H7   A0A2H1VR53   H9J355   H9J354   A0A0L7K2F9   A0A2A4JJW8   A0A158NDP0   A0A194QRC6   A0A194QQX1   A0A0J7NFD4   A0A151WLU8   A0A151XEI7   A0A212F0G1   H9J0A6   A0A3G1T1B2   B0XI43   A0A1L8D6X2   A0A0J7L0X1   A0A232EGH1   A0A076FT24   A0A158NZK6   A0A0P4WG45   A0A195B6A6   A0A194Q8J5   A0A195BP85   A0A139WKA8   K7IV86   B0XCJ3   B0XI42   A0A194QE27   A0A195ET92   A0A023F7A3   F4W474   A0A195CI97   A0A0F6Q4J7   H9J0A8   A0A151XEU9   A0A026WRA5   H9J0A4   A0A195F4X3   A0A195CN33   A0A1S4G7W1   A0A1Y1LZE8   A0A088A4Z9   A0A151X1L8   A0A0L7QT43   E9IVH7   A0A154PCJ3   J9HTP4   H9J0A5   J9EB03   J9HJE4   A0A182GQQ8   V9IG12   A0A195EK98  

PDB

5ILO     E-value=2.32436e-26,     Score=294

KEGG

101746795    no KO assigned | (RefSeq) 15-hydroxyprostaglandin dehydrogenase [NAD(+)]-like

GO

GO:0016491   GO:0004022   GO:0005737  

SignalP

Position:   1 - 18,         Likelihood:  0.997393

 

 

Length:

286

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.12077

Exp number, first 60 AAs:

0.05003

Total prob of N-in:

0.00431

outside

1  -  286

 

 

Pi

139.874351

Theta

135.345293

Tajima's D

0.110624

CLR

0

CSRT

0.3972801359932

Interpretation

Uncertain