Gene

KWMTBOMO03038  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005831

Annotation

alcohol_dehydrogenase_precursor_[Bombyx_mori]

Location

Bomo_Chr5(-):16391558-16392627      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.489 Mitochondrial   Reliability : 1.01 PlasmaMembrane   Reliability : 1.145

CDS

ATGATACATAGTGTGATAAAAACATTTTTCGTATTTTGCTTTGTAATAAATATTGCAAGTGCTCTGAGTGACTTAAAAAATGAAAACGAAATCGAAGGTAAGGTTGTAGTTGTTACGGGAGCAGCACAAGGTATCGGTTATGCTATAGCTGATAACTTTTTGAAAAACGGTGCAAAAGTCATAATTATACTGGACATAAATGTACCAAAAGGTATACAAGCTGCGAAAGAGTTAAATTGTAAGTACGGAAAGAATAAAGCTGAGTTCATTGAATGCGATATTACTAAAGACTTGGAGAGGGTCTCGAAAATGATTTATAAGAAATACAAGTATGTGGATGTATTGGTTAACAATGCAGGAATAGGTGAAGAAAATAAACCAAGGAAACTCCTGCTGACAAATGCTGTAGCTACTATTGAATTTTCTCTCAAGTTCATGGAAAATATGAGAAAAGACAAACTAGGTGGAAAAGGTGGTACTATAATCAATATAGCGTCAATAGTAGTGCATTACATTGATCCTTTCTTCTTTACGTACAGAGGAACGAAATTTGCCATCATGGGATTCTCACGATCTTTAGGACATGAATACAACTACAAAAAGAACGGTGTGAGAGTACTAACAATATGTCCGGGAGCAACAAATACAACACTGATTTCAAATAATTTCAATCTGGATAGTGAAGATGCGGCAGCTCTTGCTAAAGAGTTTCAATATCAAATTATACAATCTCCCGACAATGTAGGGAAAGGTGCTGTGGAAATATTCAAAAACGCTAAAACTGGTTCGTCTTGGGATATCGAGAATGAAAAACCTCCTGTTGAGTCGACTGACACGATAAGAGTTTTAAAAATTGGTGAAAGCCATTGA

Protein

MIHSVIKTFFVFCFVINIASALSDLKNENEIEGKVVVVTGAAQGIGYAIADNFLKNGAKVIIILDINVPKGIQAAKELNCKYGKNKAEFIECDITKDLERVSKMIYKKYKYVDVLVNNAGIGEENKPRKLLLTNAVATIEFSLKFMENMRKDKLGGKGGTIINIASIVVHYIDPFFFTYRGTKFAIMGFSRSLGHEYNYKKNGVRVLTICPGATNTTLISNNFNLDSEDAAALAKEFQYQIIQSPDNVGKGAVEIFKNAKTGSSWDIENEKPPVESTDTIRVLKIGESH

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9J8I9   Q1HPX6   H9J8J0   H9J8I6   H9J8I8   H9J8I4   + More
H9J8I5   H9JWW1   A0A0H4TDA9   H9JWW7   H9JWW0   H9JYK0   A0A0L7KQW0   A0A0H4TD16   A0A2H1VNC8   A0A1L8D6N5   A0A2A4JIR0   A0A0F6Q0W0   A0A194R949   D2SNK3   A0A194R584   A0A0F6Q0X5   A0A2W1BSK9   S4PIB4   U5KC20   A0A0F6Q2J9   I4DKW3   A0A194R4F0   A0A0L7LJP6   A0A2W1BR60   A0A212F911   A0A194R3L5   H9J369   A0A2W1BL60   A0A194QJQ6   H9JWW6   A0A212F936   A0A2H1VSR5   A0A0H4TH26   A0A0F6Q4H7   A0A2H1VR53   H9J354   H9J355   A0A2A4JJW8   A0A0L7K2F9   H9J353   H9J0A6   A0A1Y1LZE8   A0A194QRC6   A0A194QQX1   A0A194QE27   A0A212F0G1   A0A1Y1MVB3   A0A194Q8J5   A0A158NDP0   A0A224XI78   H9J0A8   A0A1Y1K7W8   A0A151WLU8   A0A3G1T1B2   A0A224XI56   Q6RUR3   A0A023F7A3   A0A212F0F9   A0A0H4TG49   A0A0J7NFD4   H9J0A5   A0A067QWG1   A0A1Y1LXI3   A0A2H1WWP5   A0A195BP85   H9J0A4   A0A140KPR8   A0A1W4X3A0   A0A151XEI7   R4FLI9   A0A0N1INL6   A0A2H1W7D8   A0A088A4Z9   A0A0J7L0X1   A0A0C9R6P4   A0A0N1IPP9   A0A0P4WG45   V9IG12   A0A069DY58   A0A194Q1E5   A0A154PCJ3   G8JKE8   G8JKD9   B0XI43   A0A194QA14   A0A1W4WBZ1   A0A2J7QR36   U5KCB3   A0A1Y1MAW1   A0A232EGH1  

Pubmed

19121390    26227816    26354079    20074338    28756777    23622113    + More
24053512    22651552    22118469    28004739    21347285    25474469    24845553    26334808    22679863    28648823   

EMBL

BABH01027538    DQ443276    ABF51365.1    BABH01027533    BABH01027535    BABH01027536    + More
BABH01027537    BABH01027525    BABH01027529    BABH01027530    BABH01043464    KP899549    AKQ06148.1    BABH01040078    BABH01043465    BABH01044234    JTDY01007189    KOB65394.1    KP899551    AKQ06150.1    ODYU01003471    SOQ42306.1    GEYN01000013    JAV02116.1    NWSH01001322    PCG71699.1    KP237884    AKD01737.1    KQ460779    KPJ12396.1    EZ407131    ACX53694.1    KPJ12400.1    KP237899    AKD01752.1    KZ149989    PZC75626.1    GAIX01005455    JAA87105.1    KC007343    AGQ45608.1    KP237873    AKD01726.1    AK401931    KQ459144    BAM18553.1    KPJ03685.1    KPJ12399.1    JTDY01000876    KOB75589.1    PZC75627.1    AGBW02009651    OWR50236.1    KPJ12398.1    BABH01036649    PZC75628.1    KPJ03686.1    OWR50237.1    ODYU01003911    SOQ43254.1    KP899550    AKQ06149.1    KP237875    AKD01728.1    SOQ43256.1    BABH01036642    PCG71700.1    JTDY01017041    KOB51868.1    BABH01036648    BABH01019209    GEZM01045515    JAV77770.1    KQ461175    KPJ07894.1    KPJ07892.1    KQ459302    KPJ01716.1    AGBW02011082    OWR47236.1    GEZM01023447    JAV88385.1    KPJ01719.1    ADTU01012731    GFTR01004241    JAW12185.1    BABH01019210    GEZM01089353    JAV57529.1    KQ982944    KYQ48859.1    MG846919    AXY94771.1    GFTR01004259    JAW12167.1    AY491503    AAR84629.1    GBBI01001633    JAC17079.1    OWR47238.1    KP899548    AKQ06147.1    LBMM01005734    KMQ91250.1    BABH01019208    KK852879    KDR14474.1    GEZM01049940    JAV75747.1    ODYU01011579    SOQ57407.1    KQ976424    KYM88327.1    BABH01019201    BABH01019202    LN794625    CEO43692.1    KQ982254    KYQ58773.1    ACPB03004191    GAHY01001368    JAA76142.1    KQ461161    KPJ08013.1    ODYU01006680    SOQ48742.1    LBMM01001364    KMQ96442.1    GBYB01012004    JAG81771.1    KQ460366    KPJ15603.1    GDRN01065431    JAI64685.1    JR045632    AEY60015.1    GBGD01002580    JAC86309.1    KQ459590    KPI97220.1    KQ434870    KZC09507.1    JP593077    AER92462.1    JP593068    AER92453.1    DS233256    EDS28983.1    KQ459249    KPJ02363.1    NEVH01011985    PNF31051.1    KC007341    AGQ45606.1    GEZM01036109    GEZM01036108    JAV82969.1    NNAY01004765    OXU17447.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000053240    UP000053268    UP000007151    + More
UP000005205    UP000075809    UP000036403    UP000027135    UP000078540    UP000192223    UP000015103    UP000005203    UP000076502    UP000002320    UP000235965    UP000215335   

PRIDE

H9J8I9    Q1HPX6    H9J8J0    H9J8I6    H9J8I8    H9J8I4    + More
H9J8I5    H9JWW1    H9JWW7    H9JWW0    H9JYK0    H9J369    H9JWW6    H9J354    H9J355    H9J353    H9J0A6    H9J0A8    H9J0A5    H9J0A4   

Pfam

PF00106   adh_short

Interpro

IPR002347   SDR_fam        + More
IPR036291   NAD(P)-bd_dom_sf       
IPR020904   Sc_DH/Rdtase_CS       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

H9J8I9   Q1HPX6   H9J8J0   H9J8I6   H9J8I8   H9J8I4   + More
H9J8I5   H9JWW1   A0A0H4TDA9   H9JWW7   H9JWW0   H9JYK0   A0A0L7KQW0   A0A0H4TD16   A0A2H1VNC8   A0A1L8D6N5   A0A2A4JIR0   A0A0F6Q0W0   A0A194R949   D2SNK3   A0A194R584   A0A0F6Q0X5   A0A2W1BSK9   S4PIB4   U5KC20   A0A0F6Q2J9   I4DKW3   A0A194R4F0   A0A0L7LJP6   A0A2W1BR60   A0A212F911   A0A194R3L5   H9J369   A0A2W1BL60   A0A194QJQ6   H9JWW6   A0A212F936   A0A2H1VSR5   A0A0H4TH26   A0A0F6Q4H7   A0A2H1VR53   H9J354   H9J355   A0A2A4JJW8   A0A0L7K2F9   H9J353   H9J0A6   A0A1Y1LZE8   A0A194QRC6   A0A194QQX1   A0A194QE27   A0A212F0G1   A0A1Y1MVB3   A0A194Q8J5   A0A158NDP0   A0A224XI78   H9J0A8   A0A1Y1K7W8   A0A151WLU8   A0A3G1T1B2   A0A224XI56   Q6RUR3   A0A023F7A3   A0A212F0F9   A0A0H4TG49   A0A0J7NFD4   H9J0A5   A0A067QWG1   A0A1Y1LXI3   A0A2H1WWP5   A0A195BP85   H9J0A4   A0A140KPR8   A0A1W4X3A0   A0A151XEI7   R4FLI9   A0A0N1INL6   A0A2H1W7D8   A0A088A4Z9   A0A0J7L0X1   A0A0C9R6P4   A0A0N1IPP9   A0A0P4WG45   V9IG12   A0A069DY58   A0A194Q1E5   A0A154PCJ3   G8JKE8   G8JKD9   B0XI43   A0A194QA14   A0A1W4WBZ1   A0A2J7QR36   U5KCB3   A0A1Y1MAW1   A0A232EGH1  

PDB

2GDZ     E-value=1.37479e-24,     Score=278

KEGG

101735412    K00069 15-hydroxyprostaglandin dehydrogenase (NAD) [EC:1.1.1.141] | (RefSeq) 15-hydroxyprostaglandin

GO

GO:0016491   GO:0004022  

SignalP

Position:   1 - 21,         Likelihood:  0.969823

 

 

Length:

289

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

14.86791

Exp number, first 60 AAs:

5.00283

Total prob of N-in:

0.34391

outside

1  -  289

 

 

Pi

390.516057

Theta

174.379143

Tajima's D

4.033131

CLR

1.526498

CSRT

0.999250037498125

Interpretation

Uncertain