Gene

KWMTBOMO03037  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005831

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_15-hydroxyprostaglandin_dehydrogenase_[NAD(+)]-like_[Bombyx_mori]

Location

Bomo_Chr5(-):16390141-16391037      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.872

CDS

ATGTACCAAAAGGTAGAAGGTAGACAAGCTGCGAAAGAGTTAAATTCTAAATATGGAAAGAATAAAGCTGAGTTCATTGAATGCGATATTACTAAAGACTTGGAGAGGGTCTCGAAAATGATTTATAAGAAATACAAGTATGTGGATGTATTGGTTAACAATGCAGAAATAGGTGAAGAAAATAAACCAAAGAAACTCCTGCTGACAAATGTTGTAGCTACTATTGAATTTTCTCTCAAGTTCATGGAAAATATGAGAAAAGACAAACTAGGCGGAAAAGGAGGTACTATAATCAATATAGCGTCAATAGTAGTGCATTACATTGATTCTTTCTTCTTTACGTACAGAGGAACGAAATTTGCCATTATGGGATTCTCACGATCTTTAGGACACGAATGCAACTATAAAAAGAGCGGTTTGAGAGTACTAACAATATGTCCGGGAGCAACAAATACAACACTGTGTTCAGATAATCCCAAAATGAATAGTGAAGACGCGGCAGCTCTTGCTAAAGAATATCAATATCAAATTATACAATCTCCCGACAATGTAGGGAAAGGTGCTGTGGAAATATTCAAAAATGCTAATACTGGTACGTCTTGGGAAGTCGCGTATGAAAAATATCCTGTTGAGTCGACTGATACGATAAGAGTTTAA

Protein

MYQKVEGRQAAKELNSKYGKNKAEFIECDITKDLERVSKMIYKKYKYVDVLVNNAEIGEENKPKKLLLTNVVATIEFSLKFMENMRKDKLGGKGGTIINIASIVVHYIDSFFFTYRGTKFAIMGFSRSLGHECNYKKSGLRVLTICPGATNTTLCSDNPKMNSEDAAALAKEYQYQIIQSPDNVGKGAVEIFKNANTGTSWEVAYEKYPVESTDTIRV

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9J8I9   Q1HPX6   H9J8J0   H9J8I8   H9J8I6   H9J8I4   + More
A0A0L7KQW0   H9J8I5   A0A2A4JIR0   S4PIB4   D2SNK3   A0A194R4F0   A0A0H4TDA9   A0A2W1BSK9   A0A0L7LJP6   A0A0F6Q0X5   U5KC20   A0A194QJQ6   A0A212F911   A0A194R949   A0A0H4TD16   I4DKW3   A0A2H1VNC8   A0A1L8D6N5   A0A194R584   A0A2W1BR60   A0A0F6Q2J9   A0A0F6Q0W0   A0A194R3L5   H9JWW1   H9J369   A0A2H1VSR5   H9JWW7   A0A0F6Q4H7   H9JWW0   H9JYK0   A0A2W1BL60   A0A0L7K392   A0A076FT29   A0A212F936   A0A0H4TH26   H9JWW6   H9J354   A0A2H1VR53   A0A2A4JJW8   A0A0L7K2F9   H9J355   A0A194QQX1   A0A194Q8J5   H9J0A8   A0A194QRC6   A0A194QE27   A0A3G1T1B2   H9J0A6   H9J353   A0A076FT24   H9J0A5   A0A212F0G1   H9J0A4   A0A0L7KNH1   Q6RUR3   A0A158NDP0   A0A195BP85   A0A0H4TG49   A0A0F6Q4J7   A0A224XI78   A0A0J7NFD4   A0A2W1BM47   A0A023F7A3   A0A0H4TY65   A0A139WKA8   A0A1Y1LZE8   R4FLI9   A0A212F0F9   A0A1Y1K7W8   A0A224XI56   E2A712   A0A151XEI7   A0A1L8D6X2   A0A2A4K9E1   A0A182GQQ7   A0A1Y1MVB3   A0A140KPR8   A0A0J7L0X1   J9HJ88   A0A2A4KAR2   B0XCJ3   D6WGE4   A0A182H9W1   D6WGE5   J3JY86   A0A151WLU8   A0A2W1BJY5   B0XI43   E2BHN0  

Pubmed

19121390    26227816    23622113    20074338    26354079    28756777    + More
24053512    22118469    22651552    24817326    21347285    25474469    18362917    19820115    28004739    20798317    26483478    17510324    22516182   

EMBL

BABH01027538    DQ443276    ABF51365.1    BABH01027535    BABH01027536    BABH01027537    + More
BABH01027533    BABH01027525    JTDY01007189    KOB65394.1    BABH01027529    BABH01027530    NWSH01001322    PCG71699.1    GAIX01005455    JAA87105.1    EZ407131    ACX53694.1    KQ460779    KPJ12399.1    KP899549    AKQ06148.1    KZ149989    PZC75626.1    JTDY01000876    KOB75589.1    KP237899    AKD01752.1    KC007343    AGQ45608.1    KQ459144    KPJ03686.1    AGBW02009651    OWR50236.1    KPJ12396.1    KP899551    AKQ06150.1    AK401931    BAM18553.1    KPJ03685.1    ODYU01003471    SOQ42306.1    GEYN01000013    JAV02116.1    KPJ12400.1    PZC75627.1    KP237873    AKD01726.1    KP237884    AKD01737.1    KPJ12398.1    BABH01043464    BABH01036649    ODYU01003911    SOQ43254.1    BABH01040078    KP237875    AKD01728.1    BABH01043465    BABH01044234    PZC75628.1    JTDY01013396    KOB52144.1    KF960802    AII22004.1    OWR50237.1    KP899550    AKQ06149.1    BABH01036642    SOQ43256.1    PCG71700.1    JTDY01017041    KOB51868.1    KQ461175    KPJ07892.1    KQ459302    KPJ01719.1    BABH01019210    KPJ07894.1    KPJ01716.1    MG846919    AXY94771.1    BABH01019209    BABH01036648    KF960797    AII21999.1    BABH01019208    AGBW02011082    OWR47236.1    BABH01019201    BABH01019202    JTDY01007968    KOB64832.1    AY491503    AAR84629.1    ADTU01012731    KQ976424    KYM88327.1    KP899548    AKQ06147.1    KP237895    AKD01748.1    GFTR01004241    JAW12185.1    LBMM01005734    KMQ91250.1    KZ149998    PZC75361.1    GBBI01001633    JAC17079.1    KP899552    AKQ06151.1    KQ971329    KYB28353.1    GEZM01045515    JAV77770.1    ACPB03004191    GAHY01001368    JAA76142.1    OWR47238.1    GEZM01089353    JAV57529.1    GFTR01004259    JAW12167.1    GL437252    EFN70744.1    KQ982254    KYQ58773.1    GEYN01000012    JAV02117.1    NWSH01000014    PCG80831.1    JXUM01081116    KQ563228    KXJ74246.1    GEZM01023447    JAV88385.1    LN794625    CEO43692.1    LBMM01001364    KMQ96442.1    CH477766    EJY57919.1    PCG80830.1    DS232698    EDS44855.1    EFA01118.2    JXUM01030715    JXUM01030716    JXUM01030717    KQ560893    KXJ80459.1    EFA01117.2    BT128210    AEE63171.1    KQ982944    KYQ48859.1    PZC75359.1    DS233256    EDS28983.1    GL448322    EFN84778.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000053240    UP000053268    UP000007151    + More
UP000005205    UP000078540    UP000036403    UP000007266    UP000015103    UP000000311    UP000075809    UP000069940    UP000249989    UP000008820    UP000002320    UP000008237   

PRIDE

H9J8I9    Q1HPX6    H9J8J0    H9J8I8    H9J8I6    H9J8I4    + More
H9J8I5    H9JWW1    H9J369    H9JWW7    H9JWW0    H9JYK0    H9JWW6    H9J354    H9J355    H9J0A8    H9J0A6    H9J353    H9J0A5    H9J0A4   

Pfam

PF00106   adh_short

Interpro

IPR002347   SDR_fam        + More
IPR036291   NAD(P)-bd_dom_sf       
IPR020904   Sc_DH/Rdtase_CS       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

H9J8I9   Q1HPX6   H9J8J0   H9J8I8   H9J8I6   H9J8I4   + More
A0A0L7KQW0   H9J8I5   A0A2A4JIR0   S4PIB4   D2SNK3   A0A194R4F0   A0A0H4TDA9   A0A2W1BSK9   A0A0L7LJP6   A0A0F6Q0X5   U5KC20   A0A194QJQ6   A0A212F911   A0A194R949   A0A0H4TD16   I4DKW3   A0A2H1VNC8   A0A1L8D6N5   A0A194R584   A0A2W1BR60   A0A0F6Q2J9   A0A0F6Q0W0   A0A194R3L5   H9JWW1   H9J369   A0A2H1VSR5   H9JWW7   A0A0F6Q4H7   H9JWW0   H9JYK0   A0A2W1BL60   A0A0L7K392   A0A076FT29   A0A212F936   A0A0H4TH26   H9JWW6   H9J354   A0A2H1VR53   A0A2A4JJW8   A0A0L7K2F9   H9J355   A0A194QQX1   A0A194Q8J5   H9J0A8   A0A194QRC6   A0A194QE27   A0A3G1T1B2   H9J0A6   H9J353   A0A076FT24   H9J0A5   A0A212F0G1   H9J0A4   A0A0L7KNH1   Q6RUR3   A0A158NDP0   A0A195BP85   A0A0H4TG49   A0A0F6Q4J7   A0A224XI78   A0A0J7NFD4   A0A2W1BM47   A0A023F7A3   A0A0H4TY65   A0A139WKA8   A0A1Y1LZE8   R4FLI9   A0A212F0F9   A0A1Y1K7W8   A0A224XI56   E2A712   A0A151XEI7   A0A1L8D6X2   A0A2A4K9E1   A0A182GQQ7   A0A1Y1MVB3   A0A140KPR8   A0A0J7L0X1   J9HJ88   A0A2A4KAR2   B0XCJ3   D6WGE4   A0A182H9W1   D6WGE5   J3JY86   A0A151WLU8   A0A2W1BJY5   B0XI43   E2BHN0  

PDB

2GDZ     E-value=2.63008e-14,     Score=188

KEGG

101735412    K00069 15-hydroxyprostaglandin dehydrogenase (NAD) [EC:1.1.1.141] | (RefSeq) 15-hydroxyprostaglandin

GO

GO:0016491   GO:0004022   GO:0005737  

Length:

218

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

19.04377

Exp number, first 60 AAs:

0

Total prob of N-in:

0.87222

inside

1  -  89

TMhelix

90  -  112

outside

113  -  218

 

 

Pi

501.259678

Theta

223.768647

Tajima's D

3.923693

CLR

0.730527

CSRT

0.998450077496125

Interpretation

Uncertain