Gene

KWMTBOMO03035  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005831

Annotation

alcohol_dehydrogenase_precursor_[Bombyx_mori]

Location

Bomo_Chr5(-):16379039-16380177      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.148 Mitochondrial   Reliability : 1.248 PlasmaMembrane   Reliability : 1.035

CDS

ATGACACTTAATTTGATAAAAACATTTTTCGTATCTTGCTTTGTTATAAATATTGTAAGTGCTCTGAGTGACCTAAAAAAAGAAAACGAAATTGAAGGTAAGGTCGTAGTCATTACGGGAGCAGCACAAGGTATCGGTTATGCTATAGCTGATAACTTTTTGAAAAACGGTGCAAAAGTCATAATTATACTGGACATAAATGTGCCAAAAGGTATACAAGCTGCGAAAGAGTTAAATTGTAAGTACGGAAAGAATAAAGCTGAGTTTATTGAATGCGATATCACTAAAGATTTGGAAAGGATTTCGAAAATTATTTATAAGAAATACAAATACGTGGATGTACTAGTTAACAATGCAGGAATATTTAAAGAAATTAAGCCAAGGAAACTCCTGTTGACAAACGCAGTAGCTACTATTGAATTTTCTCTCAAGTTCATGGAAAATATGAGAAAAGACAAACTAAGTGGAAAAGGCGGTACTATAATCAACATAGCATCGACAGTAGTGCATTACATTGATCCTTTCTTTCCTACATACAGAGGAACGAAATTTGCCATCATGGGATTCTCACGATCTCTAGGACATGAATACAACTACAAAAAGAACGGTGTGAGAGTACTAACAATATGTCCCGGAGAAACAAATACAACACTGGGGTTAGATAATTCCAATGTAAATAGTGAAGACGCAGCAGCTCTTGCTAAAGAATATCAATATCAAATTATACAATCTCCCGATAATGTAGGGAAAGGAGCTGTAGAAATATTCAAAAACGCTAAAACTGGTACGTCTTGGGATGTCGAAAATGAAAAACCTCCTGTTGAGTCGACTGATACTATAAGACTTTTAAAAATTGGTGAAAGCCTGTGA

Protein

MTLNLIKTFFVSCFVINIVSALSDLKKENEIEGKVVVITGAAQGIGYAIADNFLKNGAKVIIILDINVPKGIQAAKELNCKYGKNKAEFIECDITKDLERISKIIYKKYKYVDVLVNNAGIFKEIKPRKLLLTNAVATIEFSLKFMENMRKDKLSGKGGTIINIASTVVHYIDPFFPTYRGTKFAIMGFSRSLGHEYNYKKNGVRVLTICPGETNTTLGLDNSNVNSEDAAALAKEYQYQIIQSPDNVGKGAVEIFKNAKTGTSWDVENEKPPVESTDTIRLLKIGESL

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9J8I9   Q1HPX6   H9J8J0   H9J8I6   H9J8I4   H9J8I5   + More
H9J8I8   A0A0H4TDA9   H9JYK0   H9JWW1   A0A194R584   H9JWW0   A0A0L7KQW0   H9JWW7   A0A194R949   A0A194R4F0   A0A194R3L5   I4DKW3   A0A194QJQ6   A0A1L8D6N5   A0A2A4JIR0   A0A2H1VNC8   S4PIB4   A0A0H4TD16   D2SNK3   H9J369   A0A212F911   A0A0F6Q0X5   A0A0F6Q0W0   A0A2W1BSK9   U5KC20   H9JWW6   A0A2W1BR60   A0A0F6Q2J9   A0A212F936   A0A0L7LJP6   A0A2W1BL60   A0A0H4TH26   A0A2H1VSR5   A0A0F6Q4H7   H9J355   A0A0L7K2F9   A0A2H1VR53   H9J354   A0A2A4JJW8   A0A158NDP0   A0A212F0G1   H9J353   A0A0J7NFD4   A0A1Y1MVB3   D6WGE4   A0A194QQX1   A0A023F7A3   A0A067QWG1   A0A1Y1LZE8   A0A194QRC6   A0A194QE27   A0A195BP85   A0A151WLU8   A0A1B6DW76   A0A194Q8J5   A0A0J7L0X1   A0A0L7QTB9   H9J0A6   A0A0N1INL6   A0A0C9R6P4   A0A0H4TG49   A0A1Y1K7W8   A0A2J7QR36   A0A2H1WWP5   A0A194QA61   A0A151XEI7   H9J0A5   H9J0A4   A0A2H1W7D8   A0A194Q1E5   A0A026WTY5   A0A195B3G6   A0A224XI78   A0A195ET92   A0A1Y1LHL6   A0A151X1L8   Q6RUR3   A0A1Y1MYW2   F4W473   A0A3G1T1B2   A0A1Y1LXI3   A0A232EGH1   R4FLI9   A0A195ETI6   A0A0M9A7K7   A0A2H1WL48   A0A194QA14   A0A1Y1N6G0   E9I9W7   D6WGE5   A0A158NP49  

Pubmed

19121390    26354079    26227816    22651552    23622113    20074338    + More
22118469    28756777    24053512    21347285    28004739    18362917    19820115    25474469    24845553    24508170    21719571    28648823    21282665   

EMBL

BABH01027538    DQ443276    ABF51365.1    BABH01027533    BABH01027525    BABH01027529    + More
BABH01027530    BABH01027535    BABH01027536    BABH01027537    KP899549    AKQ06148.1    BABH01044234    BABH01043464    KQ460779    KPJ12400.1    BABH01043465    JTDY01007189    KOB65394.1    BABH01040078    KPJ12396.1    KPJ12399.1    KPJ12398.1    AK401931    KQ459144    BAM18553.1    KPJ03685.1    KPJ03686.1    GEYN01000013    JAV02116.1    NWSH01001322    PCG71699.1    ODYU01003471    SOQ42306.1    GAIX01005455    JAA87105.1    KP899551    AKQ06150.1    EZ407131    ACX53694.1    BABH01036649    AGBW02009651    OWR50236.1    KP237899    AKD01752.1    KP237884    AKD01737.1    KZ149989    PZC75626.1    KC007343    AGQ45608.1    PZC75627.1    KP237873    AKD01726.1    OWR50237.1    JTDY01000876    KOB75589.1    PZC75628.1    KP899550    AKQ06149.1    ODYU01003911    SOQ43254.1    KP237875    AKD01728.1    BABH01036642    JTDY01017041    KOB51868.1    SOQ43256.1    PCG71700.1    ADTU01012731    AGBW02011082    OWR47236.1    BABH01036648    LBMM01005734    KMQ91250.1    GEZM01023447    JAV88385.1    KQ971329    EFA01118.2    KQ461175    KPJ07892.1    GBBI01001633    JAC17079.1    KK852879    KDR14474.1    GEZM01045515    JAV77770.1    KPJ07894.1    KQ459302    KPJ01716.1    KQ976424    KYM88327.1    KQ982944    KYQ48859.1    GEDC01007377    JAS29921.1    KPJ01719.1    LBMM01001364    KMQ96442.1    KQ414755    KOC61726.1    BABH01019209    KQ461161    KPJ08013.1    GBYB01012004    JAG81771.1    KP899548    AKQ06147.1    GEZM01089353    JAV57529.1    NEVH01011985    PNF31051.1    ODYU01011579    SOQ57407.1    KQ459249    KPJ02362.1    KQ982254    KYQ58773.1    BABH01019208    BABH01019201    BABH01019202    ODYU01006680    SOQ48742.1    KQ459590    KPI97220.1    KK107119    EZA58569.1    KQ976625    KYM79031.1    GFTR01004241    JAW12185.1    KQ981979    KYN31470.1    GEZM01059474    JAV71465.1    KQ982585    KYQ54299.1    AY491503    AAR84629.1    GEZM01023251    JAV88537.1    GL887491    EGI71069.1    MG846919    AXY94771.1    GEZM01049940    JAV75747.1    NNAY01004765    OXU17447.1    ACPB03004191    GAHY01001368    JAA76142.1    KYN31471.1    KQ435727    KOX78096.1    ODYU01009339    SOQ53696.1    KPJ02363.1    GEZM01013524    JAV92510.1    GL761846    EFZ22724.1    EFA01117.2    ADTU01001531   

Proteomes

UP000005204    UP000053240    UP000037510    UP000053268    UP000218220    UP000007151    + More
UP000005205    UP000036403    UP000007266    UP000027135    UP000078540    UP000075809    UP000053825    UP000235965    UP000053097    UP000078541    UP000007755    UP000215335    UP000015103    UP000053105   

PRIDE

H9J8I9    Q1HPX6    H9J8J0    H9J8I6    H9J8I4    H9J8I5    + More
H9J8I8    H9JYK0    H9JWW1    H9JWW0    H9JWW7    H9J369    H9JWW6    H9J355    H9J354    H9J353    H9J0A6    H9J0A5    H9J0A4   

Pfam

PF00106   adh_short

Interpro

IPR002347   SDR_fam        + More
IPR036291   NAD(P)-bd_dom_sf       
IPR020904   Sc_DH/Rdtase_CS       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

H9J8I9   Q1HPX6   H9J8J0   H9J8I6   H9J8I4   H9J8I5   + More
H9J8I8   A0A0H4TDA9   H9JYK0   H9JWW1   A0A194R584   H9JWW0   A0A0L7KQW0   H9JWW7   A0A194R949   A0A194R4F0   A0A194R3L5   I4DKW3   A0A194QJQ6   A0A1L8D6N5   A0A2A4JIR0   A0A2H1VNC8   S4PIB4   A0A0H4TD16   D2SNK3   H9J369   A0A212F911   A0A0F6Q0X5   A0A0F6Q0W0   A0A2W1BSK9   U5KC20   H9JWW6   A0A2W1BR60   A0A0F6Q2J9   A0A212F936   A0A0L7LJP6   A0A2W1BL60   A0A0H4TH26   A0A2H1VSR5   A0A0F6Q4H7   H9J355   A0A0L7K2F9   A0A2H1VR53   H9J354   A0A2A4JJW8   A0A158NDP0   A0A212F0G1   H9J353   A0A0J7NFD4   A0A1Y1MVB3   D6WGE4   A0A194QQX1   A0A023F7A3   A0A067QWG1   A0A1Y1LZE8   A0A194QRC6   A0A194QE27   A0A195BP85   A0A151WLU8   A0A1B6DW76   A0A194Q8J5   A0A0J7L0X1   A0A0L7QTB9   H9J0A6   A0A0N1INL6   A0A0C9R6P4   A0A0H4TG49   A0A1Y1K7W8   A0A2J7QR36   A0A2H1WWP5   A0A194QA61   A0A151XEI7   H9J0A5   H9J0A4   A0A2H1W7D8   A0A194Q1E5   A0A026WTY5   A0A195B3G6   A0A224XI78   A0A195ET92   A0A1Y1LHL6   A0A151X1L8   Q6RUR3   A0A1Y1MYW2   F4W473   A0A3G1T1B2   A0A1Y1LXI3   A0A232EGH1   R4FLI9   A0A195ETI6   A0A0M9A7K7   A0A2H1WL48   A0A194QA14   A0A1Y1N6G0   E9I9W7   D6WGE5   A0A158NP49  

PDB

2GDZ     E-value=1.23419e-22,     Score=262

KEGG

732963    K00069 15-hydroxyprostaglandin dehydrogenase (NAD) [EC:1.1.1.141] | (RefSeq) alcohol dehydrogenase

GO

GO:0016491   GO:0004022   GO:0005737  

SignalP

Position:   1 - 21,         Likelihood:  0.888411

 

 

Length:

289

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.28474

Exp number, first 60 AAs:

0.82303

Total prob of N-in:

0.04835

outside

1  -  289

 

 

Pi

139.31372

Theta

110.539036

Tajima's D

0.816778

CLR

22.69163

CSRT

0.607119644017799

Interpretation

Uncertain