Gene

KWMTBOMO03034  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005832

Annotation

alcohol_dehydrogenase_precursor_[Bombyx_mori]

Location

Bomo_Chr5(-):16376117-16377127      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.319 Mitochondrial   Reliability : 1.195 PlasmaMembrane   Reliability : 1.107

CDS

ATGACACTTAGTTTGATAAAAACATTTTTCGTGTCTTGCTTTGCAATAAATATTGTAAGTGCTCTGGGTGATATAAAAGATGAAAAAAAAATCGAAGGTAAGGTTGTAGTTGTTACGGGAGCAGCACGAGGTATCGGTTATGCTATAGCTGATAACTTTTTGAAAAATGGTGCAGAAGTCATAATTATACTTGACATAAATGTGCAAAATGGTATAAAAGCTGCGAAAGAGTTAAATTGTAAGTACGGCAATAACACAGCCGAGTTTATTGAATGCGATATTACTAAAGACTTGGAGAGAGTCTCGAAAATGATTTCTTTGAAATACAAATACGTCGATGTACTAGTTAACAATGCAGGTATAATTGAAGAAAATAAACCAAGGAAACTCTTGTTGACAAACGCTGTAGCTACTATTGAATTTTCTCTTAAATTCATGGAAAATATGAGAAAAGACAAACTAAACGGAAAAGGCGGTACTATAATTAACATAGCGTCAACTGCAGTGCATTACATTGATCCTTTCTTCCCGACATACAGAGGAACGAAATTTGCAATTATGGGATTCTCACGATCTTTAGGGCACGAATACAACTACAAAAAGAGCGGTGTGAGAGTACTAACTATATGTCCGGGAGCAACAAATACAACACTGGGTTTAAATAATATCAAGGTGAATAGTGAAGACGCGCCAGCTCTTGCAAAAGAATATCAATATGTAACTATACAATCTCCCGACAATGTAGGGAAAGGTGCTGTGGAAATATTCAAAAACGCTAAAACTGGTACGTCTTGGGATATCGAGAATGAAAAACCTCCTGTGGAGTCGACTGACACGATAAGAGTTTTAAAAATTGGTGAAAGCCTTTGA

Protein

MTLSLIKTFFVSCFAINIVSALGDIKDEKKIEGKVVVVTGAARGIGYAIADNFLKNGAEVIIILDINVQNGIKAAKELNCKYGNNTAEFIECDITKDLERVSKMISLKYKYVDVLVNNAGIIEENKPRKLLLTNAVATIEFSLKFMENMRKDKLNGKGGTIINIASTAVHYIDPFFPTYRGTKFAIMGFSRSLGHEYNYKKSGVRVLTICPGATNTTLGLNNIKVNSEDAPALAKEYQYVTIQSPDNVGKGAVEIFKNAKTGTSWDIENEKPPVESTDTIRVLKIGESL

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9J8J0   Q1HPX6   H9J8I9   H9J8I6   H9J8I4   H9J8I8   + More
H9J8I5   H9JYK0   H9JWW1   H9JWW7   H9JWW0   A0A0H4TDA9   A0A0L7KQW0   A0A2H1VNC8   A0A0H4TD16   A0A194R949   A0A1L8D6N5   A0A194R4F0   A0A194R584   A0A194QJQ6   I4DKW3   H9J369   A0A2A4JIR0   A0A0F6Q0X5   S4PIB4   A0A2W1BSK9   A0A212F911   A0A0F6Q0W0   D2SNK3   H9JWW6   A0A194R3L5   U5KC20   A0A2W1BR60   A0A0F6Q2J9   A0A212F936   A0A0H4TH26   A0A0L7LJP6   A0A2W1BL60   A0A2H1VSR5   H9J355   A0A0F6Q4H7   A0A2H1VR53   H9J354   A0A0L7K2F9   A0A158NDP0   A0A1Y1MVB3   A0A194QRC6   A0A194QE27   H9J353   H9J0A4   A0A0J7NFD4   A0A212F0G1   A0A151WLU8   H9J0A6   A0A195BP85   H9J0A5   A0A2J7QR36   A0A2H1WWP5   A0A194QA61   A0A1Y1K7W8   D6WGE4   A0A2H1W7D8   A0A1Y1LZE8   A0A151XEI7   A0A194QQX1   B0XI43   A0A3G1T1B2   A0A023F7A3   Q6RUR3   A0A0N1INL6   H9J0A8   A0A194Q8J5   A0A194Q1E5   A0A0C9R6P4   A0A0L7QTB9   A0A0N1IPP9   A0A0H4TG49   A0A088A4Z9   A0A1S4G7W1   A0A154PCJ3   A0A067QWG1   A0A195EK98   B0XI42   A0A195ET92   A0A194QA14   V9IG12   A0A1B6DW76   A0A026WTY5   U5KCB3   A0A0J7L0X1   A0A0P4WG45   A0A1Y1LXI3   A0A195B6A6   A0A158NZK6   A0A1W4X3A0  

Pubmed

19121390    26227816    26354079    22651552    23622113    28756777    + More
22118469    20074338    24053512    21347285    28004739    18362917    19820115    25474469    17510324    24845553    24508170   

EMBL

BABH01027538    DQ443276    ABF51365.1    BABH01027533    BABH01027525    BABH01027535    + More
BABH01027536    BABH01027537    BABH01027529    BABH01027530    BABH01044234    BABH01043464    BABH01040078    BABH01043465    KP899549    AKQ06148.1    JTDY01007189    KOB65394.1    ODYU01003471    SOQ42306.1    KP899551    AKQ06150.1    KQ460779    KPJ12396.1    GEYN01000013    JAV02116.1    KPJ12399.1    KPJ12400.1    KQ459144    KPJ03686.1    AK401931    BAM18553.1    KPJ03685.1    BABH01036649    NWSH01001322    PCG71699.1    KP237899    AKD01752.1    GAIX01005455    JAA87105.1    KZ149989    PZC75626.1    AGBW02009651    OWR50236.1    KP237884    AKD01737.1    EZ407131    ACX53694.1    KPJ12398.1    KC007343    AGQ45608.1    PZC75627.1    KP237873    AKD01726.1    OWR50237.1    KP899550    AKQ06149.1    JTDY01000876    KOB75589.1    PZC75628.1    ODYU01003911    SOQ43254.1    BABH01036642    KP237875    AKD01728.1    SOQ43256.1    JTDY01017041    KOB51868.1    ADTU01012731    GEZM01023447    JAV88385.1    KQ461175    KPJ07894.1    KQ459302    KPJ01716.1    BABH01036648    BABH01019201    BABH01019202    LBMM01005734    KMQ91250.1    AGBW02011082    OWR47236.1    KQ982944    KYQ48859.1    BABH01019209    KQ976424    KYM88327.1    BABH01019208    NEVH01011985    PNF31051.1    ODYU01011579    SOQ57407.1    KQ459249    KPJ02362.1    GEZM01089353    JAV57529.1    KQ971329    EFA01118.2    ODYU01006680    SOQ48742.1    GEZM01045515    JAV77770.1    KQ982254    KYQ58773.1    KPJ07892.1    DS233256    EDS28983.1    MG846919    AXY94771.1    GBBI01001633    JAC17079.1    AY491503    AAR84629.1    KQ461161    KPJ08013.1    BABH01019210    KPJ01719.1    KQ459590    KPI97220.1    GBYB01012004    JAG81771.1    KQ414755    KOC61726.1    KQ460366    KPJ15603.1    KP899548    AKQ06147.1    KQ434870    KZC09507.1    KK852879    KDR14474.1    KQ978747    KYN28685.1    EDS28982.1    KQ981979    KYN31470.1    KPJ02363.1    JR045632    AEY60015.1    GEDC01007377    JAS29921.1    KK107119    EZA58569.1    KC007341    AGQ45606.1    LBMM01001364    KMQ96442.1    GDRN01065431    JAI64685.1    GEZM01049940    JAV75747.1    KQ976587    KYM79714.1    ADTU01004714   

Proteomes

UP000005204    UP000037510    UP000053240    UP000053268    UP000218220    UP000007151    + More
UP000005205    UP000036403    UP000075809    UP000078540    UP000235965    UP000007266    UP000002320    UP000053825    UP000005203    UP000076502    UP000027135    UP000078492    UP000078541    UP000053097    UP000192223   

PRIDE

H9J8J0    Q1HPX6    H9J8I9    H9J8I6    H9J8I4    H9J8I8    + More
H9J8I5    H9JYK0    H9JWW1    H9JWW7    H9JWW0    H9J369    H9JWW6    H9J355    H9J354    H9J353    H9J0A4    H9J0A6    H9J0A5    H9J0A8   

Pfam

PF00106   adh_short

Interpro

IPR036291   NAD(P)-bd_dom_sf        + More
IPR002347   SDR_fam       
IPR020904   Sc_DH/Rdtase_CS       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

H9J8J0   Q1HPX6   H9J8I9   H9J8I6   H9J8I4   H9J8I8   + More
H9J8I5   H9JYK0   H9JWW1   H9JWW7   H9JWW0   A0A0H4TDA9   A0A0L7KQW0   A0A2H1VNC8   A0A0H4TD16   A0A194R949   A0A1L8D6N5   A0A194R4F0   A0A194R584   A0A194QJQ6   I4DKW3   H9J369   A0A2A4JIR0   A0A0F6Q0X5   S4PIB4   A0A2W1BSK9   A0A212F911   A0A0F6Q0W0   D2SNK3   H9JWW6   A0A194R3L5   U5KC20   A0A2W1BR60   A0A0F6Q2J9   A0A212F936   A0A0H4TH26   A0A0L7LJP6   A0A2W1BL60   A0A2H1VSR5   H9J355   A0A0F6Q4H7   A0A2H1VR53   H9J354   A0A0L7K2F9   A0A158NDP0   A0A1Y1MVB3   A0A194QRC6   A0A194QE27   H9J353   H9J0A4   A0A0J7NFD4   A0A212F0G1   A0A151WLU8   H9J0A6   A0A195BP85   H9J0A5   A0A2J7QR36   A0A2H1WWP5   A0A194QA61   A0A1Y1K7W8   D6WGE4   A0A2H1W7D8   A0A1Y1LZE8   A0A151XEI7   A0A194QQX1   B0XI43   A0A3G1T1B2   A0A023F7A3   Q6RUR3   A0A0N1INL6   H9J0A8   A0A194Q8J5   A0A194Q1E5   A0A0C9R6P4   A0A0L7QTB9   A0A0N1IPP9   A0A0H4TG49   A0A088A4Z9   A0A1S4G7W1   A0A154PCJ3   A0A067QWG1   A0A195EK98   B0XI42   A0A195ET92   A0A194QA14   V9IG12   A0A1B6DW76   A0A026WTY5   U5KCB3   A0A0J7L0X1   A0A0P4WG45   A0A1Y1LXI3   A0A195B6A6   A0A158NZK6   A0A1W4X3A0  

PDB

2GDZ     E-value=6.93985e-23,     Score=264

KEGG

101744214    no KO assigned | (RefSeq) 15-hydroxyprostaglandin dehydrogenase [NAD(+)]-like

GO

GO:0016491   GO:0004022   GO:0005737  

SignalP

Position:   1 - 21,         Likelihood:  0.905979

 

 

Length:

289

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.849429999999999

Exp number, first 60 AAs:

0.59635

Total prob of N-in:

0.03258

outside

1  -  289

 

 

Pi

222.002274

Theta

197.65342

Tajima's D

0.575998

CLR

0.43029

CSRT

0.531423428828559

Interpretation

Uncertain