Silkworm Genome Informatics Database

Gene

KWMTBOMO03031

Annotation

PREDICTED:_uncharacterized_protein_LOC107445205_[Parasteatoda_tepidariorum]

Location

Bomo_Chr5(+):16218908-16221645 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.008

CDS

ATGGTATATAAATACAAGAGGAAGACTAATCAAGCCCAATGGAGTGAGGACAGTATGATGCTTGCAATAGCAGATTGCAATTCTGGCATTCCTGTCAAAACGACCGCAAAAAAGTATGGTCTACCTTACGCCACTCTCTATAGGCATTGGAAAAAAGGTAGTTCGACGGCTCAGCTTGGTCGTTTTCGTAAAGTTTTCAACGATGGTCAAGAGGGAGATCTTCGAACGTATTTGTATGAAATGGATAGTGTTTTTTATGGGCTAACCCGAGAAGATTTTAAAACATTAGTTTTTGAATACGCGAAACGCAATAATGTCACTTATCCGCCTAGTTGGGACAAAAATAAAAAAGCTGGTGATGATTGGCTAGCAGGATTTATTAGAAGAAATCCACAAATTACACTAAGAATTCCAGAAGCAACCACAATTGGCAGAGTTAAAGGTTTCAGTCGTCCTCAAGTAGAAAGGTTCTATCTATGTCAAATTGATGGTACTAGAATCTATAATATAGATGAAACTGGCATTCAGACCTCGACAAATAAACCACCCAAGGTTCTTTCAGTTAAAGCTTTACAGTACGCAACTGAAAATAATGTCATCATTTTGTCTTTGCCACCGCACACCTCAAACAAACTTCAACCTCTGGACGTGGCTGTGTATGGTCCATTTAAAATATTCTTCGAGCAAGAAATCAATAGATTTCAAAAGGCTCATCCAGGTAGGATAATCAACCAATACGATGTAGCCAAACTGTTCAGTCCAGCTTATCTGAAATCTGCTACTCCTAACAATGCTATCAAAGGCTTTCAATCAACCGGTATCTGGCCAACAAATAAAGATATATGGGGAGAAGAAGATTATGTACCATCTTCTATTACAATGACAGACCGTAATACCGCTAACCAACTGGAGACTTTTATAGACTCAAACAGTCAAAATGTTGAAATTACGATTGACATCGAAAAGCCTTCTACATCAGGGCTCCAAAGTCAGTCACTGCAAATTGATGTAGAACCACTGGAACAGATTGAAAGAAAATTTATTGAGAATGTGAATGTAGAAGTTGAAGCTGCAGTGGAAAATAGTATCATGGGTATAGTATCAGTGTCCAATATGAATCAAATACATTCTCGAGATACATCGCCTTCAATTTTGGATAAATTACCCGACAAAGATCCCCTTACATGCAATGCTGTTGTAGTAACGGCTGTAGCTGATAATACTCAAAAATTGTCTAAACCACAAGAAGCAATGTCCACTGAAGATATGAATCAAGGTGCAGATCTGACTCAAGACAGTATAGATATAAAAGAGGGTCAATTTAAAGGCAACGATGATGAAATTATTATGGACCTGGAATCATCTACGGCTCGGGCTTCAGCATATTTCAGTCCTAAAGACATAAGACCGCTTCCGATGCCACGCGTTTCTGTGGGTACACGTAAAAGAAAGGTTCAAAAGTCTGAGGTGTTAACAAGCACGCCAGTGAAGCGAAAACAAAAAGAAAAATTTATAAAAATTAATGTCAAAGCAATGAAAAATATGAATATAGATTTAAATGCTAAGCCAAAGACTGCGACAAAGAAAAATACTAAAACGACCAAAAATATAATTGTTAAAGATAAAAGTAGTGATAAGGAAAACGAGGAAGAACAGTGTGTATGCTATTATTGTGGGGAGAACTATATAGAAATAAATAAAAAACCAGTTGAGGATTGGATTCAGTGTGATAAATGTAAGCAACGGAGTCACGAAAAATGCACGGCTTATGGAGGAATAGGCTTATTCTTTTGTGATATTTGCACGGATTAG

Protein

MVYKYKRKTNQAQWSEDSMMLAIADCNSGIPVKTTAKKYGLPYATLYRHWKKGSSTAQLGRFRKVFNDGQEGDLRTYLYEMDSVFYGLTREDFKTLVFEYAKRNNVTYPPSWDKNKKAGDDWLAGFIRRNPQITLRIPEATTIGRVKGFSRPQVERFYLCQIDGTRIYNIDETGIQTSTNKPPKVLSVKALQYATENNVIILSLPPHTSNKLQPLDVAVYGPFKIFFEQEINRFQKAHPGRIINQYDVAKLFSPAYLKSATPNNAIKGFQSTGIWPTNKDIWGEEDYVPSSITMTDRNTANQLETFIDSNSQNVEITIDIEKPSTSGLQSQSLQIDVEPLEQIERKFIENVNVEVEAAVENSIMGIVSVSNMNQIHSRDTSPSILDKLPDKDPLTCNAVVVTAVADNTQKLSKPQEAMSTEDMNQGADLTQDSIDIKEGQFKGNDDEIIMDLESSTARASAYFSPKDIRPLPMPRVSVGTRKRKVQKSEVLTSTPVKRKQKEKFIKINVKAMKNMNIDLNAKPKTATKKNTKTTKNIIVKDKSSDKENEEEQCVCYYCGENYIEINKKPVEDWIQCDKCKQRSHEKCTAYGGIGLFFCDICTD

Uniprot

H9JME9 H9JAE4 A0A2H1WZE3 A0A2A4J1E0

Pubmed

19121390

EMBL

BABH01016912 BABH01009206 ODYU01012198 SOQ58377.1 NWSH01003711 PCG65895.1 + More

Proteomes

UP000005204 UP000218220

PRIDE

H9JME9 H9JAE4

Pfam

PF03184 DDE_1

Interpro

IPR004875   DDE_SF_endonuclease_dom        + More
IPR019786   Zinc_finger_PHD-type_CS
IPR011011   Znf_FYVE_PHD
IPR013083   Znf_RING/FYVE/PHD

SUPFAM

SSF57903 SSF57903

Gene 3D

3.30.40.10

ProteinModelPortal

H9JME9 H9JAE4 A0A2H1WZE3 A0A2A4J1E0

KEGG

NA

GO

GO:0046872 GO:0003676 GO:0003677 GO:0005515 GO:0008270 GO:0006414 GO:0016020 GO:0051103 GO:0006281 GO:0048384

Length:

603

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00419999999999999

Exp number, first 60 AAs:

0.00241

Total prob of N-in:

0.01246

outside

1 - 603

Pi

463.568802

Theta

203.939837

Tajima's D

4.054084

CLR

0

CSRT

0.999150042497875

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree