SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03029
Pre Gene Modal
BGIBMGA003598
Annotation
PREDICTED:_atlastin-like_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.376 Nuclear   Reliability : 1.242
 

Sequence

CDS
ATGGATGATCTGATCAGCCCGAAACCCATGTGGGCCCTGATAGTGCCTTGGATAATCACGTTGGCCAAACGCAGGAGCTACCACGAGGACTGCAAGTACTATGCTATTAGGTACTTCAGGAATGAGCGATGCGGTTCCTCGAAATATGACGAGGATAGTTATTATGATGATCTGATTTGGAGCATTAATAGGAGCTACGATACGAATTATGCTTTGTGA
Protein
MDDLISPKPMWALIVPWIITLAKRRSYHEDCKYYAIRYFRNERCGSSKYDEDSYYDDLIWSINRSYDTNYAL

Summary

Uniprot
Pfam
PF02263   GBP
Interpro
IPR030386   G_GB1_RHD3_dom        + More
IPR015894   Guanylate-bd_N       
IPR036543   Guanylate-bd_C_sf       
IPR027417   P-loop_NTPase       
SUPFAM
SSF48340   SSF48340        + More
SSF52540   SSF52540       
ProteinModelPortal

Ontologies

Topology

Length:
72
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.12492
Exp number, first 60 AAs:
2.12492
Total prob of N-in:
0.12509
outside
1  -  72
 
 

Population Genetic Test Statistics

Pi
241.035402
Theta
196.694346
Tajima's D
0.709535
CLR
0.000896
CSRT
0.580520973951302
Interpretation
Uncertain
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