Gene

KWMTBOMO03026

Annotation

PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr5(-):16067826-16070604      View in EpiBrowser

Full name

PiggyBac transposable element-derived protein 4      

Location in the cell

Nuclear   Reliability : 1.768 PlasmaMembrane   Reliability : 1.471

CDS

ATGAACGTGTACCTTTTCCTTTCAGGCAGCGAAGAAGAGTCTGACGAAGAGGAAGAAGGGATTGCCGAGTTAGCGGTGCCCCGAATAGCAAGAATGTTTATGGACGAAGACGATGCGGAAGTCAACGAAAGATCCGCCAACGCTACTTTGGAGCGGTCCCCTCAATCGCCTCGACCAGCCGATTGTGCTTCAACGCCCGCCTCACCGACGCCTGTTTCGCCGACTGCCATGGAACCCAGCAACAAATTTCAATTTGAATGGAGAAAGTTTTCAACGCCTCAAATTGAACCTCATTTGAGGCGAGAACCGTTCTCGCAAATTAGTGGCCCTACAGTTTCTTTCACGAGACCATACGAAGCATTTATTGCTATATGGGATCGTGAAATTATGGAAATGATTGTCAGGGAAACTAACATTTACGCACAGCAGCTGGCAACGACCATGTTGGAGAATGGAACGATCTGTCCTAGTAGTCGAATTACTCGTTGGCATGATACAAATGTAAATGAACTTTACACGTATTTTGCCATCGTTCTGGCTATGGGAGTGGTGATCAAAACCCGGTTAACCGAATACTGGAATACCTCTAACGACATCTTCAGTACTCCTGGCTTTTCCACGGAGATGTCATATGACAGATTCCACCTCCTGTCAGCATGTCTGCATTTTAATAATAATAAAGATTGTAACTCTGCGTTGTTGACACGACCCCAAGCTAAACTTTTTAAAATTAAACCTATAATAGATCACCTTAATCGCAAGTTTTCTGAATTATATAGTTTGTCTCAAAATGTGGCTCTCGATGAGAGTCTGACCATGTGGAAGGGCTGGCTTGAAATAAACCAGTTCATCCCTAACAAAGCAGCCACAGTTGGAATCAAAACCTTTGAATTGTGTGAATCTCAGACTGGTTATTTGTGGCGTTTTGAAGTATATGCAGGCCATGACACCTCGGCATTTCAAGAAGATGATCCAGTCTCGGGGAAAGTACCAGCTCTAGTGCTCAGACTTTTAAATGGTCTTGAACATAAAGGGCACACAATATGGATGGACAATTACTACAACTCTCCATCACTGGCACGAGAACTGAAGATCCGGGGATTTGACTGCGCGGGGACGCTCCGGACAAACCGTCAATTCGTACCACCTGAATTGGCGAGTATTACAAAAAACGACATGATTGTCGGTCAATTGTTGGGATGCACCTCTGGAGATGTGGACATTGTGGTGTGGAGGGATAAAAACCTCGTGGCTTTTATTTCAACATACCATGCTCTCCTAGCTACCAAGTGTGGCGATACAGTTAAGCCGACAGTCGCGCAGGACTATAATCTTAATATGGGCGGAGTAGACCGTAAGGATCAGCAACTCGCAATGTACCCTTTAGAAAGAAAAAGGAATAAGGTGTGCGATGCTTATAAACATGATTAA

Protein

MNVYLFLSGSEEESDEEEEGIAELAVPRIARMFMDEDDAEVNERSANATLERSPQSPRPADCASTPASPTPVSPTAMEPSNKFQFEWRKFSTPQIEPHLRREPFSQISGPTVSFTRPYEAFIAIWDREIMEMIVRETNIYAQQLATTMLENGTICPSSRITRWHDTNVNELYTYFAIVLAMGVVIKTRLTEYWNTSNDIFSTPGFSTEMSYDRFHLLSACLHFNNNKDCNSALLTRPQAKLFKIKPIIDHLNRKFSELYSLSQNVALDESLTMWKGWLEINQFIPNKAATVGIKTFELCESQTGYLWRFEVYAGHDTSAFQEDDPVSGKVPALVLRLLNGLEHKGHTIWMDNYYNSPSLARELKIRGFDCAGTLRTNRQFVPPELASITKNDMIVGQLLGCTSGDVDIVVWRDKNLVAFISTYHALLATKCGDTVKPTVAQDYNLNMGGVDRKDQQLAMYPLERKRNKVCDAYKHD

Keywords

Complete proteome   Reference proteome  

Feature

chain  PiggyBac transposable element-derived protein 4

Uniprot

A0A194RRT0   A0A2H1V5F3   A0A2W1BDM1   A0A2A4IYX3   A0A2A4JR95   A0A2A4IY54   + More
A0A2A4ITI3   A0A0L7L984   A0A2W1B9N8   A0A2J7PER0   A0A2A4K616   A0A2J7Q6H1   A0A2J7PD69   A0A2J7QZK8   A0A2J7PIK3   A0A2J7PRG6   A0A2J7QSN3   A0A2W1BNR3   A0A2J7PE61   A0A2J7Q8N9   A0A147BD88   F7FDY8   A0A2K6S7R1   A0A2K5PIR4   A0A2K5BXT0   H9F6U8   G7MWA2   G7PAN9   A0A2K5KZS5   Q96DM1   A0A2K6ALX5   G3QWT8   A0A2K6JV20   A0A2K6NHE6   A0A2K5UF88   A0A2K5HN84   A0A2K5XAW3   H2NMQ4   A0A0D9SEG0   A0A096NT85   A0A1D5R1S0   A0A1B6E873   K7DKZ9   A0A087TVE5   H9IWM5   A0A147BEZ3   A0A1B6LFF4   A0A087UJ51   A0A087TJF5   H9J421   A0A1B6H7X0   A0A0K0E1W0   J9LP86   A0A1B6LW93   A0A1B0FFI5   A0A1B6KKZ3   A0A2J7R6C2   A8J4K3   A0A3Q0JNJ9   A0A2J7Q4C7   A0A2J7PIT0   A0A2J7QF25   A0A1B6JYI5   A0A2J7PH34   A0A2J7R708   A0A1B6E8U4   A0A2J7QY13   A0A2J7R0C5   A0A2J7RD45   A8J4K9   H9J3V8   A0A2B4SRV7   E2AJF8   A0A1B6HI21   A0A2J7Q696   J9KLM1   A0A1A8PBD7   A0A3N0XE89   A0A023EYN9   A0A1A8D728   A0A1A8C9U5   A0A1A8PXY9   A8J4K6   A0A1B6KA50   A0A1B6FTB9   A0A1B6L7B9   T2M852   A0A1B6KBT3   A0A087TRV5   A0A1E1WHA1   A0A087U4Y0  

Pubmed

26354079    28756777    26227816    29652888    25319552    22002653    + More
14702039    16572171    22398555    25362486    17431167    16136131    19121390    17934208    20798317    25474469    24065732   

EMBL

KQ459989    KPJ18766.1    ODYU01000749    SOQ36006.1    KZ150113    PZC73302.1    + More
NWSH01005160    PCG64390.1    NWSH01000726    PCG74565.1    NWSH01005605    PCG64100.1    NWSH01008683    PCG62453.1    JTDY01002247    KOB71806.1    KZ150197    PZC72319.1    NEVH01026090    PNF14815.1    NWSH01000091    PCG79681.1    NEVH01017475    NEVH01002684    NEVH01001351    PNF24176.1    PNF41738.1    PNF42927.1    NEVH01026393    PNF14286.1    NEVH01009069    PNF34004.1    NEVH01026401    NEVH01025126    NEVH01020854    NEVH01013255    NEVH01000629    PNF14193.1    PNF16176.1    PNF21085.1    PNF29260.1    PNF43158.1    NEVH01021985    PNF18924.1    NEVH01011876    PNF31583.1    PZC73303.1    NEVH01026109    PNF14626.1    NEVH01016950    PNF24933.1    GEGO01007089    JAR88315.1    JU326601    AFE70357.1    CM001259    EHH27175.1    CM001282    EHH62949.1    AK057200    AK094816    AK289491    AC079203    CABD030095328    AQIA01062119    ABGA01233763    NDHI03003689    PNJ08370.1    AQIB01116437    AHZZ02030739    JSUE03037923    GEDC01003168    JAS34130.1    AACZ04060380    GABC01006592    GABD01003812    GABE01001690    NBAG03000487    JAA04746.1    JAA29288.1    JAA43049.1    PNI20010.1    KK116918    KFM69084.1    BABH01021160    BABH01021161    BABH01021162    BABH01021163    GEGO01006047    JAR89357.1    GEBQ01017560    JAT22417.1    KK120039    KFM77390.1    KK115494    KFM65244.1    BABH01041064    GECU01037003    GECU01013756    JAS70703.1    JAS93950.1    ABLF02006169    ABLF02055685    GEBQ01012026    JAT27951.1    CCAG010009903    GEBQ01027849    JAT12128.1    NEVH01006795    PNF36382.1    AB300556    BAF82019.1    NEVH01018384    PNF23441.1    NEVH01024959    PNF16251.1    NEVH01015302    PNF27192.1    GECU01003439    JAT04268.1    NEVH01025150    PNF15655.1    NEVH01006740    PNF36596.1    GEDC01002971    JAS34327.1    NEVH01009368    PNF33480.1    NEVH01008275    PNF34265.1    NEVH01005303    PNF38748.1    AB300558    BAF82021.1    BABH01028864    LSMT01000021    PFX32631.1    GL439981    EFN66430.1    GECU01033435    GECU01003618    JAS74271.1    JAT04089.1    NEVH01017534    PNF24104.1    ABLF02028028    HAEI01002033    SBR78690.1    RJVU01079141    ROI15640.1    GBBI01004439    JAC14273.1    HAEA01000274    SBQ28754.1    HADZ01012453    SBP76394.1    HAEH01008939    SBR85849.1    AB300557    BAF82020.1    GEBQ01031648    JAT08329.1    GECZ01016293    JAS53476.1    GEBQ01020417    GEBQ01019545    JAT19560.1    JAT20432.1    HAAD01001920    CDG68152.1    GEBQ01031067    JAT08910.1    KK116466    KFM67844.1    GDQN01004768    JAT86286.1    KK118194    KFM72419.1   

Proteomes

UP000053240    UP000218220    UP000037510    UP000235965    UP000008225    UP000233220    + More
UP000233040    UP000233020    UP000009130    UP000233060    UP000005640    UP000233120    UP000001519    UP000233180    UP000233200    UP000233100    UP000233080    UP000233140    UP000001595    UP000029965    UP000028761    UP000006718    UP000002277    UP000054359    UP000005204    UP000035681    UP000007819    UP000092444    UP000079169    UP000225706    UP000000311   

PRIDE

Q96DM1    H9IWM5    H9J421    H9J3V8   

Pfam

PF13843   DDE_Tnp_1_7        + More
PF13842   Tnp_zf-ribbon_2
PF01094   ANF_receptor
PF05225   HTH_psq
PF02017   CIDE-N

Interpro

IPR029526   PGBD        + More
IPR032718   PGBD4_C_Znf-ribbon       
IPR028082   Peripla_BP_I       
IPR001828   ANF_lig-bd_rcpt       
IPR007889   HTH_Psq       
IPR009057   Homeobox-like_sf       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR003508   CIDE-N_dom       

SUPFAM

SSF53822   SSF53822        + More
SSF46689   SSF46689       
SSF57667   SSF57667       

ProteinModelPortal

A0A194RRT0   A0A2H1V5F3   A0A2W1BDM1   A0A2A4IYX3   A0A2A4JR95   A0A2A4IY54   + More
A0A2A4ITI3   A0A0L7L984   A0A2W1B9N8   A0A2J7PER0   A0A2A4K616   A0A2J7Q6H1   A0A2J7PD69   A0A2J7QZK8   A0A2J7PIK3   A0A2J7PRG6   A0A2J7QSN3   A0A2W1BNR3   A0A2J7PE61   A0A2J7Q8N9   A0A147BD88   F7FDY8   A0A2K6S7R1   A0A2K5PIR4   A0A2K5BXT0   H9F6U8   G7MWA2   G7PAN9   A0A2K5KZS5   Q96DM1   A0A2K6ALX5   G3QWT8   A0A2K6JV20   A0A2K6NHE6   A0A2K5UF88   A0A2K5HN84   A0A2K5XAW3   H2NMQ4   A0A0D9SEG0   A0A096NT85   A0A1D5R1S0   A0A1B6E873   K7DKZ9   A0A087TVE5   H9IWM5   A0A147BEZ3   A0A1B6LFF4   A0A087UJ51   A0A087TJF5   H9J421   A0A1B6H7X0   A0A0K0E1W0   J9LP86   A0A1B6LW93   A0A1B0FFI5   A0A1B6KKZ3   A0A2J7R6C2   A8J4K3   A0A3Q0JNJ9   A0A2J7Q4C7   A0A2J7PIT0   A0A2J7QF25   A0A1B6JYI5   A0A2J7PH34   A0A2J7R708   A0A1B6E8U4   A0A2J7QY13   A0A2J7R0C5   A0A2J7RD45   A8J4K9   H9J3V8   A0A2B4SRV7   E2AJF8   A0A1B6HI21   A0A2J7Q696   J9KLM1   A0A1A8PBD7   A0A3N0XE89   A0A023EYN9   A0A1A8D728   A0A1A8C9U5   A0A1A8PXY9   A8J4K6   A0A1B6KA50   A0A1B6FTB9   A0A1B6L7B9   T2M852   A0A1B6KBT3   A0A087TRV5   A0A1E1WHA1   A0A087U4Y0  

KEGG

101742359    no KO assigned | (RefSeq) piggyBac transposable element-derived protein 4-like

GO

GO:0016021   GO:0005634   GO:0003677   GO:0006915  

Subcellular location

Nucleus  

Length:

476

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.43064

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01947

outside

1  -  476

 

 

Pi

417.256773

Theta

235.474135

Tajima's D

3.202493

CLR

0.514347

CSRT

0.985350732463377

Interpretation

Possibly Positive selection