Gene

KWMTBOMO03022

Pre Gene Modal

BGIBMGA004258

Annotation

PREDICTED:_uncharacterized_protein_LOC105389752_[Plutella_xylostella]

Location

Bomo_Chr5(-):16029236-16030434      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.247

CDS

ATGTCGTCGGAAAGTGACGGTGATGATGAGGGAAAAAGAAACGAGGCGAAAAAACGCAGATATCAAGGGGACGACGGACAATCAGATTCGGACTGCAGATATAAACCTTTTCTCAAACCTGGGTACCGTCGTAGTTATCCTGATAACTCTCTTAATGACGAGTTTCCTGTCTACATCGAAGGTATCAGTAGAGAAGATAAAATTGCTAACAAAAATCCTTTACTTTTATCAAAAAATTTTAAGTCGGTGAAGGGCATCAAAGAGAACAGGCGCATTAATGCTAATAAAATAATGCTTTTATTTAAACAGGCAGTGGCTGCCAATGATTTCATAAACCATAATTGCCTTAAAGAAAACAACATGAAAGCTTACATTCCGGCATCTTCAGTGGAGCGTGTGGGGAAGATAAGATTCATTCCTACAGAAACGAGTAACACTGAACTCTTTGACAAATTAATATCAGATTCAGAAATCATTGCTGTTAGACGTTTCACAAAAAAAGTAGGCGGAAATATAGTCCCAATGTCCATAATAAGTGTGACCTTTTCGAGTACTGTTCTTCCAGATTTTGTATATTTAGATAATTGGAGATATAAGGTATTCCAATATGTACCACCTTTGATGCAGTGTTTCAGATGCCTTAAATTTAGACATAGTGCCAAAGTGTGTCGGAATGAACAGGTCTGTTCTAAATGTTCAGGCAATCATTCATACAAAGATTGTTCAACTGAAATTCTGAAATGTTGTAATTGCCAAGGCGATCATTTAGCTATCTCAAGATTTTGTCCAGTGAAACAAGCCCTTTATGAAAAACATAAAAATGTTTATTTAGCAAAACAATATGCTACAGTTGTATCTAAAGAATTTCCACCTTTGCAAAGACTTCAGAACAGACCAGATCATTCAATACAAAAGAATCAAATTAAATCACAGGCCTTAATAGATAATCCTAATTCTGTTAAAAAACAACCTACTAAATTAAACTCAACTAATAATGTATCTTATGAAAATCTATTAAATGATAATTAG

Protein

MSSESDGDDEGKRNEAKKRRYQGDDGQSDSDCRYKPFLKPGYRRSYPDNSLNDEFPVYIEGISREDKIANKNPLLLSKNFKSVKGIKENRRINANKIMLLFKQAVAANDFINHNCLKENNMKAYIPASSVERVGKIRFIPTETSNTELFDKLISDSEIIAVRRFTKKVGGNIVPMSIISVTFSSTVLPDFVYLDNWRYKVFQYVPPLMQCFRCLKFRHSAKVCRNEQVCSKCSGNHSYKDCSTEILKCCNCQGDHLAISRFCPVKQALYEKHKNVYLAKQYATVVSKEFPPLQRLQNRPDHSIQKNQIKSQALIDNPNSVKKQPTKLNSTNNVSYENLLNDN

Uniprot

A0A212F9P6   A0A212ENX5   A0A0N0PAN6   A0A1E1WVE1   A0A1E1WI59   A0A0L7L7X7   + More
A0A0L7KR70   A0A146TX67   A0A0L7KKI3   A0A151ILU0   A0A0L7K426   A0A1E1WRX0   A0A2I4AUG1   A0A1E1W7S4   A0A147AN74   A0A146SYT3   A0A2A4JY07   A0A2H1X3Y9   S4PTI4   V5I8C7   K7JFH5   A0A1W7R4Q3   A0A2A4IW59   A0A1B6IW02   A0A2A4J7R9   A0A1B6J8G1   E2ACL4   A0A2A4J3N7   A0A1E1W2G0   K7JY09   A0A355B8D6   A0A147BAM1   A0A2I4CUV4   A0A146PBI8   A0A0S7F778   A0A1W7R614  

Pubmed

22118469    26354079    26227816    23622113    20075255    20798317    + More
30148503    29652888   

EMBL

AGBW02009564    OWR50429.1    AGBW02013573    OWR43205.1    KQ458678    KPJ05494.1    + More
GDQN01000127    JAT90927.1    GDQN01004380    JAT86674.1    JTDY01002411    KOB71465.1    JTDY01006990    KOB65546.1    GCES01088667    JAQ97655.1    JTDY01009347    KOB63625.1    KQ977100    KYN05833.1    JTDY01011731    KOB53761.1    GDQN01001294    JAT89760.1    GDQN01008057    JAT82997.1    GCES01006446    JAR79877.1    GCES01100530    JAQ85792.1    NWSH01000454    PCG76310.1    ODYU01013271    SOQ59978.1    GAIX01011983    JAA80577.1    GALX01004915    JAB63551.1    AAZX01010459    GEHC01001509    JAV46136.1    NWSH01005446    PCG64207.1    GECU01016591    JAS91115.1    NWSH01002630    PCG67806.1    GECU01012227    JAS95479.1    GL438560    EFN68824.1    NWSH01003611    PCG66060.1    GDQN01009891    GDQN01002796    JAT81163.1    JAT88258.1    AAZX01008611    DNYX01000002    HBK81991.1    GEGO01007575    JAR87829.1    GCES01145089    JAQ41233.1    GBYX01469912    JAO11723.1    GEHC01001075    JAV46570.1   

Proteomes

UP000007151    UP000053268    UP000037510    UP000078542    UP000192220    UP000218220    + More
UP000002358    UP000000311   

Pfam

PF00078   RVT_1        + More
PF07776   zf-AD
PF14529   Exo_endo_phos_2
PF02892   zf-BED
PF05699   Dimer_Tnp_hAT
PF00098   zf-CCHC

Interpro

IPR001878   Znf_CCHC        + More
IPR036875   Znf_CCHC_sf       
IPR000477   RT_dom       
IPR002156   RNaseH_domain       
IPR012934   Znf_AD       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR036236   Znf_C2H2_sf       
IPR012337   RNaseH-like_sf       
IPR003656   Znf_BED       
IPR008906   HATC_C_dom       

SUPFAM

SSF57756   SSF57756        + More
SSF56219   SSF56219       
SSF57667   SSF57667       
SSF53098   SSF53098       

Gene 3D

3.60.10.10    

ProteinModelPortal

A0A212F9P6   A0A212ENX5   A0A0N0PAN6   A0A1E1WVE1   A0A1E1WI59   A0A0L7L7X7   + More
A0A0L7KR70   A0A146TX67   A0A0L7KKI3   A0A151ILU0   A0A0L7K426   A0A1E1WRX0   A0A2I4AUG1   A0A1E1W7S4   A0A147AN74   A0A146SYT3   A0A2A4JY07   A0A2H1X3Y9   S4PTI4   V5I8C7   K7JFH5   A0A1W7R4Q3   A0A2A4IW59   A0A1B6IW02   A0A2A4J7R9   A0A1B6J8G1   E2ACL4   A0A2A4J3N7   A0A1E1W2G0   K7JY09   A0A355B8D6   A0A147BAM1   A0A2I4CUV4   A0A146PBI8   A0A0S7F778   A0A1W7R614  

KEGG

105841835    no KO assigned | (RefSeq) uncharacterized LOC105841835

GO

GO:0016021   GO:0008270   GO:0003676   GO:0004523   GO:0005634   GO:0003964   GO:0046983   GO:0003677   GO:0000166   GO:0006414   GO:0016020   GO:0051103   GO:0006281   GO:0048384  

Length:

342

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.9054

Exp number, first 60 AAs:

0

Total prob of N-in:

0.10040

outside

1  -  342

 

 

Pi

134.054846

Theta

124.65128

Tajima's D

0.143745

CLR

0.391632

CSRT

0.409629518524074

Interpretation

Uncertain