Gene

KWMTBOMO03021

Annotation

PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_isoform_X4_[Bombyx_mori]

Location

Bomo_Chr5(-):16015347-16021934      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.364

CDS

ATGGAACAATACGTCGAATGTGGTTCAAGCAGCGGGGCAAGCACACCGAAGAAGACTTCTACCCCAAAAAAGCGGCGAAATCTAAGTCTGCGTAGTAACGATTCTACCCCAAAAAAGCGCCGAAATCTAATAAATTCGTTCAGTAACAGACCCCGCCGTGATTCTGAAATAACCACTGCACTTAATTATGGCAGCGAAGAAGAGTCTGACGAAGAGGAAGAAGGGATTGCCGAGTTAGCGGTGCCCCGAATAGCAAGAATGTTTATGGACGAAGACGATGCGGAAGTCAACGAAAGATCCGCCAACGCTACTTTGGAGCGGTCCCCTCAATCGCCTCGACCAGCCGATTGTGCTTCAACGCCCGCCTCACCGACGCCTGTTTCGCCGACTGCCATGGAACCCAGCAACAAATTTCAATTTGAATGGAGAAAGTTTTCAACGCCTCAAATTGAACCTCATTTGAGGCGAGAACCGTTCTCGCAAATTAGTGGCCCTACAGTTTCTTTCACGAGACCATACGAAGCATTTATTGCCATATGGGATCGTGAAATTATGGAAATGATTGTCAGGGAAACTAACATTTACGCACAGCAGCTGGCAACGACCATGTTGGAGAATGGAACGATCGGTCCTAGTAGTCGAATTACTCGTTGGCATGATACAAATGTAAATGAACTTTACACGTATTTTGCCATCGTTCTGGCTATGGGAGTGGTGATCAAAACCCGGTTAAACGAATACTGGAATACCTCTAACGACATCTTCAGTACTCCTGGCTTTTCCACGAAGATGTCACTTGACAGATTCTACCTTCTGTCAGCATGTCTGCATTTTAATAATAATAAAGATTGTAACTCTGCGTTGTTGACACGACCCCAAGCTAAACTTTTTAAAATTAAACCTATAATAGATCACCTTAATCGCAAGTTTTCTGAATTATATAGTTTATCTCAAAATGTGGCTCTCGATGAGAGTCTGACCATGTGGAAGGGCTGGCTTGAAATAAACCAGTTCATCCCTAACAAAGCAGCCAAAGTTGGAATCAAAACCTTTGAATTGTGTGAATCTCAGACTGGTTATTTGTGGCGTTTTGAAGTATATGCAGGCCATGACACCTCGGCATTTCAAGAAGATGATCCAGTCTCGGGGAAAGTACCAGCTCTAGTGCTCAGACTTTTAAATGGTCTTGAACATAAAGGGCACACAATATGGATGGACAATTACTACAACTCTCCATCACTGGCACGAGAACTGAAGATCCGGGGATTTGACTGCGCGGGGACGCTCCGGACAAACCGTCAATTCGTACCACCTGAATTGGCGAGTATTACAAAAAACGACATGATTGTCGGTCAATTGTTGGGATGCACCTCTGGAGATGTGGACATTGTGGTGTGGAGGGATAAAAACCTCGTGGCTTTTATTTCAACATACCATGCTCTCCTAGCTACCAAGTGTGGCGATACAGTTAAGCCGACAGTCGCGCAGGACTATAATCTTAATATGGGCGGAGTAGACCGTAAGGATCAGCAACTCGCAATGTACCCTTTAGAAAGAAAAAGGCATAAGCACACCGAGCCCCTGCACCTAACTCAAAAACCATCGCAACATCAGTACATAGCCCGGCACAATACAGTTTCATGA

Protein

MEQYVECGSSSGASTPKKTSTPKKRRNLSLRSNDSTPKKRRNLINSFSNRPRRDSEITTALNYGSEEESDEEEEGIAELAVPRIARMFMDEDDAEVNERSANATLERSPQSPRPADCASTPASPTPVSPTAMEPSNKFQFEWRKFSTPQIEPHLRREPFSQISGPTVSFTRPYEAFIAIWDREIMEMIVRETNIYAQQLATTMLENGTIGPSSRITRWHDTNVNELYTYFAIVLAMGVVIKTRLNEYWNTSNDIFSTPGFSTKMSLDRFYLLSACLHFNNNKDCNSALLTRPQAKLFKIKPIIDHLNRKFSELYSLSQNVALDESLTMWKGWLEINQFIPNKAAKVGIKTFELCESQTGYLWRFEVYAGHDTSAFQEDDPVSGKVPALVLRLLNGLEHKGHTIWMDNYYNSPSLARELKIRGFDCAGTLRTNRQFVPPELASITKNDMIVGQLLGCTSGDVDIVVWRDKNLVAFISTYHALLATKCGDTVKPTVAQDYNLNMGGVDRKDQQLAMYPLERKRHKHTEPLHLTQKPSQHQYIARHNTVS

Uniprot

A0A194RRT0   A0A2H1V5F3   A0A2A4ITI3   A0A2J7PER0   A0A0L7L984   A0A2J7Q6H1   + More
A0A2J7QSN3   A0A2W1BNR3   F7FDY8   A0A2K6S7R1   A0A2K5PIR4   A0A147BD88   A0A087TJF5   A0A147BEZ3   A0A087UJ51   A0A2J7R6C2   A0A1B0FFI5   A0A2J7Q4C7   A0A2J7PIT0   H9J3V8   A0A3N0XE89   A0A087TRV5  

Pubmed

26354079    26227816    28756777    29652888    19121390   

EMBL

KQ459989    KPJ18766.1    ODYU01000749    SOQ36006.1    NWSH01008683    PCG62453.1    + More
NEVH01026090    PNF14815.1    JTDY01002247    KOB71806.1    NEVH01017475    NEVH01002684    NEVH01001351    PNF24176.1    PNF41738.1    PNF42927.1    NEVH01011876    PNF31583.1    KZ150113    PZC73303.1    GEGO01007089    JAR88315.1    KK115494    KFM65244.1    GEGO01006047    JAR89357.1    KK120039    KFM77390.1    NEVH01006795    PNF36382.1    CCAG010009903    NEVH01018384    PNF23441.1    NEVH01024959    PNF16251.1    BABH01028864    RJVU01079141    ROI15640.1    KK116466    KFM67844.1   

Proteomes

UP000053240    UP000218220    UP000235965    UP000037510    UP000008225    UP000233220    + More
UP000233040    UP000054359    UP000092444    UP000005204   

PRIDE

H9J3V8   

Pfam

PF13843   DDE_Tnp_1_7        + More
PF13842   Tnp_zf-ribbon_2

Interpro

IPR029526   PGBD        + More
IPR032718   PGBD4_C_Znf-ribbon       

ProteinModelPortal

A0A194RRT0   A0A2H1V5F3   A0A2A4ITI3   A0A2J7PER0   A0A0L7L984   A0A2J7Q6H1   + More
A0A2J7QSN3   A0A2W1BNR3   F7FDY8   A0A2K6S7R1   A0A2K5PIR4   A0A147BD88   A0A087TJF5   A0A147BEZ3   A0A087UJ51   A0A2J7R6C2   A0A1B0FFI5   A0A2J7Q4C7   A0A2J7PIT0   H9J3V8   A0A3N0XE89   A0A087TRV5  

KEGG

101742359    no KO assigned | (RefSeq) piggyBac transposable element-derived protein 4-like

GO

GO:0016021  

Length:

547

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.80097

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04178

outside

1  -  547

 

 

Pi

297.3381

Theta

167.648547

Tajima's D

2.170192

CLR

0.141674

CSRT

0.907054647267637

Interpretation

Uncertain