Gene

KWMTBOMO03020  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003596

Annotation

PREDICTED:_protein_FAM8A1_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr5(+):15996835-16001129      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.713

CDS

ATGTTAGAAACGGAAAGACTAATTGATAATTCCGCGCAACCAACGACAAGTGCGGAACAGAGTTCAACTGAGACAGCATCCGCAGAACGTGAAGCATATTTTCAGGCACTACGAATATGGATCCAACAAGCACAATTATATCAGAATTTAACGTGTTTCCCTTATTACATGGTTACATTCCAAGGTTTACAGAACCACCCCACGAACGTACCGTTACTTAATAATAATTATCAGTTTCAAGGCCAACAATTCCCATTTCAAGTTCCGAATGCACCCAGGATTGTACCAGAAGCCGCCCAACAAGTTGCTAGCTTAACTCCTGCCGAAGTGATAGCTCGTCATGGTGGCTATGAATATATAATTCCACCTCTACATAAAAGGCTGATAGCTGAATTTATAGATTTTTTACTACTTTTTGTATTGAAGTTACTTGTTACATTTGTTGCAGTCGATACACTGGAGATAATTGACACAGAAAAATTTGATTTCCAGAAATTCAGTGAATATTATGATGATTATAAATCTGCAATAGAATTCACTTCAGGAATATTGTTTCTGGAAATCGTATATAGGTTACTAGTCTGTCTATTCGAGGCTATTTGTTTATGTGGCAACGTGGGTCAGATAGGAGGAGCGACACCTGGGAAAGCTTTACTAGGACTTCGTGTAGTCACTGCTTCGGCCATATTACCCGTAGAGGGACGTCCGAAAGAGACAGTAGTGCTCTACCCGGGCAGACCCTTGGGGTTTCCCCTGGCATTACTAAGATCACTGTTAAAGAATTTCTTGATTTCTCTTCTGTTCCCACTATGCGTTGTTATGTTTGTATTTAAACACAATCGTACCGGTTACGATATTGTTTGTGGTGTCATTGTAGTCGAGGAGAACATGTTCCCACCCAGGAGAAATGCTGCATAA

Protein

MLETERLIDNSAQPTTSAEQSSTETASAEREAYFQALRIWIQQAQLYQNLTCFPYYMVTFQGLQNHPTNVPLLNNNYQFQGQQFPFQVPNAPRIVPEAAQQVASLTPAEVIARHGGYEYIIPPLHKRLIAEFIDFLLLFVLKLLVTFVAVDTLEIIDTEKFDFQKFSEYYDDYKSAIEFTSGILFLEIVYRLLVCLFEAICLCGNVGQIGGATPGKALLGLRVVTASAILPVEGRPKETVVLYPGRPLGFPLALLRSLLKNFLISLLFPLCVVMFVFKHNRTGYDIVCGVIVVEENMFPPRRNAA

Uniprot

A0A2H1VS29   A0A194PQU8   A0A0N1PI66   A0A0L7LQT7   A0A212EWC8   S4NMV0   + More
A0A1E1WJ55   A0A151JWI5   A0A151WUJ3   E2ASV8   F4WI28   A0A151JRT4   A0A0J7KSC8   A0A195CW08   A0A195AZB0   A0A158NMH7   E2C2N7   A0A067R6M1   A0A0C9RNF8   A0A026WFI2   A0A1L8D990   A0A069DRU0   A0A2J7RPG5   B0WBT9   A0A023F0B1   T1HYU9   A0A0P4VUF3   A0A1Q3FH54   A0A087UVL4   A0A224XHL5   A0A0K8TQN9   A0A1B0D5A0   K7J5U4   Q177J9   A0A1S4FCJ1   T1IKK7   A0A2R5LJT2   A0A1Q3FHL5   A0A0V0G751   A0A1B0GHM9   A0A0C9SDS3   L7M8C3   A0A293LBB3   A0A1B6E3Q9   A0A2A3ERJ9   A0A087ZVJ8   A0A1B6LKG6   T1GI92   A0A2R7W2S1   A0A023EPK3   A0A182GZC1   A0A336MU99   A0A336L1Z6   A0A1B6FFK6   A0A2P2I3T7   K1PPC8   A0A1B6JWX9   A0A2T7PGT6   A0A182RVF4   J9JVX9   D6W7H7   A0A182PGI0   A0A182UJS2   A0A2S2Q7G6   Q28Y84   B4GCU8   A0A182M0Q5   A0A182K0I7   A0A182Y731   B4HSB7   A0A0J9R8G4   A0A210Q8W9   Q7JXC6   A0A3B0JKA3   W8C7A2   A0A2H8TGR6   Q7Q2W1   A0A182UXJ4   A0A1S4H7C4   A0A182LQA2   A0A182HY21   A0A182WXE5   B4MYC7  

Pubmed

26354079    26227816    22118469    23622113    20798317    21719571    + More
21347285    24845553    24508170    30249741    26334808    25474469    27129103    26369729    20075255    17510324    26131772    25576852    24945155    26483478    22992520    18362917    19820115    15632085    17994087    25244985    22936249    28812685    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24495485    12364791    20966253   

EMBL

ODYU01004099    SOQ43617.1    KQ459597    KPI95119.1    KQ460968    KPJ10240.1    + More
JTDY01000357    KOB77561.1    AGBW02012011    OWR45802.1    GAIX01012489    JAA80071.1    GDQN01004030    JAT87024.1    KQ981676    KYN38146.1    KQ982727    KYQ51602.1    GL442363    EFN63490.1    GL888172    EGI66121.1    KQ978577    KYN30052.1    LBMM01003787    KMQ93134.1    KQ977231    KYN04722.1    KQ976697    KYM77541.1    ADTU01020504    GL452201    EFN77793.1    KK852854    KDR15028.1    GBYB01009910    JAG79677.1    KK107238    QOIP01000007    EZA54817.1    RLU20965.1    GFDF01011129    JAV02955.1    GBGD01002493    JAC86396.1    NEVH01001360    PNF42719.1    DS231882    EDS42869.1    GBBI01004473    JAC14239.1    ACPB03009425    GDKW01002126    JAI54469.1    GFDL01008144    JAV26901.1    KK121849    KFM81403.1    GFTR01004451    JAW11975.1    GDAI01001122    JAI16481.1    AJVK01003447    AAZX01005701    CH477374    EAT42367.1    JH430549    GGLE01005674    MBY09800.1    GFDL01007998    JAV27047.1    GECL01002186    JAP03938.1    AJWK01005350    AJWK01005351    GBZX01001707    JAG91033.1    GACK01005670    JAA59364.1    GFWV01000348    MAA25078.1    GEDC01004738    JAS32560.1    KZ288193    PBC34134.1    GEBQ01015840    JAT24137.1    CAQQ02015714    KK854268    PTY13972.1    GAPW01002650    JAC10948.1    JXUM01021941    KQ560616    KXJ81603.1    UFQS01002855    UFQT01002855    SSX14772.1    SSX34164.1    UFQS01001439    UFQT01001439    SSX10907.1    SSX30585.1    GECZ01020794    JAS48975.1    IACF01002905    LAB68540.1    JH816001    EKC25987.1    GECU01004034    JAT03673.1    PZQS01000004    PVD32634.1    ABLF02035549    KQ971307    EFA11296.2    GGMS01004464    MBY73667.1    CM000071    EAL26081.1    CH479181    EDW32511.1    AXCM01007367    CH480816    EDW47012.1    CM002911    KMY92378.1    NEDP02004556    OWF45174.1    AE013599    AY094806    AAF59020.1    AAM11159.1    OUUW01000001    SPP73879.1    GAMC01003739    JAC02817.1    GFXV01001489    MBW13294.1    AAAB01008966    EAA13075.4    APCN01004477    CH963894    EDW77116.1   

Proteomes

UP000053268    UP000053240    UP000037510    UP000007151    UP000078541    UP000075809    + More
UP000000311    UP000007755    UP000078492    UP000036403    UP000078542    UP000078540    UP000005205    UP000008237    UP000027135    UP000053097    UP000279307    UP000235965    UP000002320    UP000015103    UP000054359    UP000092462    UP000002358    UP000008820    UP000092461    UP000242457    UP000005203    UP000015102    UP000069940    UP000249989    UP000005408    UP000245119    UP000075900    UP000007819    UP000007266    UP000075885    UP000075902    UP000001819    UP000008744    UP000075883    UP000075881    UP000076408    UP000001292    UP000242188    UP000000803    UP000268350    UP000007062    UP000075903    UP000075882    UP000075840    UP000076407    UP000007798   

PRIDE

Q7JXC6   

Pfam

PF06271   RDD

Interpro

IPR039871   FAM8A1        + More
IPR010432   RDD       

ProteinModelPortal

A0A2H1VS29   A0A194PQU8   A0A0N1PI66   A0A0L7LQT7   A0A212EWC8   S4NMV0   + More
A0A1E1WJ55   A0A151JWI5   A0A151WUJ3   E2ASV8   F4WI28   A0A151JRT4   A0A0J7KSC8   A0A195CW08   A0A195AZB0   A0A158NMH7   E2C2N7   A0A067R6M1   A0A0C9RNF8   A0A026WFI2   A0A1L8D990   A0A069DRU0   A0A2J7RPG5   B0WBT9   A0A023F0B1   T1HYU9   A0A0P4VUF3   A0A1Q3FH54   A0A087UVL4   A0A224XHL5   A0A0K8TQN9   A0A1B0D5A0   K7J5U4   Q177J9   A0A1S4FCJ1   T1IKK7   A0A2R5LJT2   A0A1Q3FHL5   A0A0V0G751   A0A1B0GHM9   A0A0C9SDS3   L7M8C3   A0A293LBB3   A0A1B6E3Q9   A0A2A3ERJ9   A0A087ZVJ8   A0A1B6LKG6   T1GI92   A0A2R7W2S1   A0A023EPK3   A0A182GZC1   A0A336MU99   A0A336L1Z6   A0A1B6FFK6   A0A2P2I3T7   K1PPC8   A0A1B6JWX9   A0A2T7PGT6   A0A182RVF4   J9JVX9   D6W7H7   A0A182PGI0   A0A182UJS2   A0A2S2Q7G6   Q28Y84   B4GCU8   A0A182M0Q5   A0A182K0I7   A0A182Y731   B4HSB7   A0A0J9R8G4   A0A210Q8W9   Q7JXC6   A0A3B0JKA3   W8C7A2   A0A2H8TGR6   Q7Q2W1   A0A182UXJ4   A0A1S4H7C4   A0A182LQA2   A0A182HY21   A0A182WXE5   B4MYC7  

KEGG

101742511    no KO assigned | (RefSeq) protein FAM8A1

GO

GO:0016021  

PANTHER

PTHR13659  

Length:

305

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

58.84144

Exp number, first 60 AAs:

0.14702

Total prob of N-in:

0.53806

outside

1  -  257

TMhelix

258  -  277

inside

278  -  305

 

 

Pi

207.287959

Theta

155.082053

Tajima's D

1.107252

CLR

0.000226

CSRT

0.686265686715664

Interpretation

Uncertain