Gene

KWMTBOMO03006

Pre Gene Modal

BGIBMGA003588

Annotation

FERM_domain-containing_protein_5_[Papilio_xuthus]

Location

Bomo_Chr5(+):15528505-15545032      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.365 Nuclear   Reliability : 1.148

CDS

ATGTTTAAAAGCCGTGGAGATATTGTTTATAAATGCACTGTGCGACTTTTAGAGGATACTGAAATTTTAGAATGTGAATTTCATCCTAGTTTTAAGGGTAAATCTCTGCTAGAACATGTGTGTCAACAATTGAATCTCACAGAGTCTGACTACTTTGGTTTAAGATATGTGGACGCAAGTGGACAGAGACACTGGCTACACATGGCTAAACTCATCCTCAAACAAGTCAAAGATGCTTCACCTATATTGTTCAGTTTTCGAGTGAAGTTCTATCCACCTAATCCTTTACTACTAAAGGAAGATGTGACTAGATTCCAAATATATTTGCAATTGAAGCGGGATCTACTTCATGGCAGGTTGTACTGTACAGCCAATGAAGCTGCCATGCTTGGAGCTCTCATCATTCAAATTGAATTGGGAGACTATGATTCAACTATCCACATTGGTAATTATGTGAGCGAAATGAGATTGTTATTGAGACAAACAGATGCAATTGAAGGTAGGATACAGGAACTACATAGGGAACCATTGGAAGGCACACCCATTGGTGGTGGAGGAGTTAAGGGTATGTCAACTGAAGAAGCCGAAAGAACATTCCTAAAGATTGCTTGCCAACTTGATACTTATGGAGTGGACCCGCATCCAGTTAAGGATCACAGAGGAAACCAGTTATATTTAGGTATCAACCACAGTGGCATATTAACATTTCAAGGCAGTAGGAAAACAAATCATTTCAAATGGTCAGAAGTTCACAAGATCAACTTTGAGGGGAGAATGTTTATTGTTCACTTGAATTACCCAGAGAAAAAACACACGGTCGGCTTCAAGTGCCCGAGCGGGGCGGCTTGTCGTCACGTCTGGTGCTGTGCCATAGAGCAGATGCTGTTCTTCACTTTGTCGTCATCGTCGGAAGCGTGCGTGTACTCTGGCGGGGGACTGTTCTCGTGGGGAACGAAATTTAAGTACGTGGGGCGGACAGAGAGGGAGATCCTCGAGAGGGACGGCCTCCTGGCACCGAGGGAGCCTCAGGAAGAAGGCTCCAGTGCTGGAGGAAAGAGGAAAGCTTCGAGCGTACCAGCGACTCCGTCTACGCCGATGACTGGGGACTTTGGGTACAGCAGTCTGCCGCGCTCGACGCACAGCGCGCCGCTGGAGGAGAGCGGGGACGGCGCCGCGCACCTCGCGCTGGCGTGTTGCGAGCGCGCACCCGCCGACAAGCCCGCCGTATGTCCGTCCGAGTACGGGATGCGGGACTCGTTCGAGCACTCGTCGTCCGAGTCTGGCGTGACGTCACAGACGGGTCCGTCTCAGGGCGAGGAGTGGAGCCGGCCCCCCACCGCGGCGCCCCCGCCCCCCGCGCCGCGCCCCTTCAGCCTCGTGCGCGCCTTCGTGCCGTCGTTCCTGTTCGTGTGGCTGTCGCTAGGTATGTTCGCACTCCTGCTGTTCGAGACGGACGTGCGTTTTCTGCGCGCCGTCAAGCACAAGCCGGAAATGGTGGCGCTGCGCCGGTACTACTACGCGCCCCTCAAGGAATACGTCAAGAGAAAGGTCGTTGAACTGTTTTAA

Protein

MFKSRGDIVYKCTVRLLEDTEILECEFHPSFKGKSLLEHVCQQLNLTESDYFGLRYVDASGQRHWLHMAKLILKQVKDASPILFSFRVKFYPPNPLLLKEDVTRFQIYLQLKRDLLHGRLYCTANEAAMLGALIIQIELGDYDSTIHIGNYVSEMRLLLRQTDAIEGRIQELHREPLEGTPIGGGGVKGMSTEEAERTFLKIACQLDTYGVDPHPVKDHRGNQLYLGINHSGILTFQGSRKTNHFKWSEVHKINFEGRMFIVHLNYPEKKHTVGFKCPSGAACRHVWCCAIEQMLFFTLSSSSEACVYSGGGLFSWGTKFKYVGRTEREILERDGLLAPREPQEEGSSAGGKRKASSVPATPSTPMTGDFGYSSLPRSTHSAPLEESGDGAAHLALACCERAPADKPAVCPSEYGMRDSFEHSSSESGVTSQTGPSQGEEWSRPPTAAPPPPAPRPFSLVRAFVPSFLFVWLSLGMFALLLFETDVRFLRAVKHKPEMVALRRYYYAPLKEYVKRKVVELF

Similarity

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.

Uniprot

H9J251   A0A2H1VPU7   A0A194PQ68   A0A2A4J485   A0A2A4J3P0   A0A2A4J2V8   + More
A0A212FJW6   A0A0N0PAM2   D6W6N9   A0A1B6CYS5   A0A1Y1KQS4   A0A2J7R3Q3   N6TSX7   A0A2J7R3S6   A0A2J7R3S0   A0A2J7R3R3   A0A1W4XG86   A0A1W4XRA3   A0A1B0CHP0   A0A1B6L3F3   B0WPV3   A0A087ZS10   A0A154PEU2   B4KHT0   B3MPS0   A0A0C9QUZ1   B4JPY4   B4LVD7   B4NZA6   Q17BE5   B4HWL5   A0A0M3QTP3   A0A182GDD2   Q9VKY7   B3N9M1   B4Q970   A0A0C9PSY0   A0A1W4USX9   A0A2S2PEH3   A0A2S2NL20   A0A336MDB5   A0A0A9XWI4   A0A182MAW3   J9JZI4   A0A182R2J6   A0A084VJ89   A0A2S2QW22   A0A182WA08   A0A182UQW5   Q7Q844   Q29CW6   B4G7K2   A0A182Y9A6   A0A182NT53   B4NLV3   A0A026WRH3   A0A195E5K1   E0VQN4   A0A182IMJ2   E2ADQ1   A0A151I8X7   A0A182LK09   A0A182IB29   A0A158NR13   A0A1B0AV55   A0A3L8DW25   A0A1A9ZM10   A0A1A9Y5P4   A0A3B0JLC9   A0A1A9WJ43   A0A023F1K5   A0A1A9UTA3   A0A3B0JMU0   A0A2R5LNG6   A0A1I8Q1V9   A0A1J1ILS3   A0A1Z5L583   A0A131YWU2   A0A182F2U3   A0A195EUB8   L7M2I0   A0A2A3E434   W8B6G4   A0A1B0FPV8   Q86P10   A0A0R3NWK1   A0A1D2MN79  

Pubmed

19121390    26354079    22118469    18362917    19820115    28004739    + More
23537049    17994087    17550304    17510324    26483478    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    25401762    26823975    24438588    12364791    14747013    17210077    15632085    25244985    24508170    20566863    20798317    20966253    21347285    30249741    25474469    28528879    26830274    25576852    24495485    27289101   

EMBL

BABH01007424    BABH01007425    BABH01007426    ODYU01003719    SOQ42849.1    KQ459597    + More
KPI95108.1    NWSH01003361    PCG66478.1    PCG66479.1    PCG66477.1    AGBW02008204    OWR54035.1    KQ461187    KPJ07350.1    KQ971307    EFA10977.1    GEDC01029751    GEDC01018823    JAS07547.1    JAS18475.1    GEZM01079030    JAV62530.1    NEVH01007818    PNF35471.1    APGK01020369    KB740193    KB631602    ENN81148.1    ERL84544.1    PNF35470.1    PNF35472.1    PNF35473.1    AJWK01012548    GEBQ01021816    JAT18161.1    DS232030    EDS32541.1    KQ434879    KZC09954.1    CH933807    EDW13367.1    CH902620    EDV32318.1    GBYB01004457    JAG74224.1    CH916372    EDV98964.1    CH940649    EDW63316.1    CM000157    EDW88801.1    CH477322    EAT43599.1    CH480818    EDW52410.1    CP012523    ALC39263.1    JXUM01009916    JXUM01009917    JXUM01009918    JXUM01009919    KQ560294    KXJ83220.1    AE014134    BT150148    AAF52919.1    AGR33801.1    CH954177    EDV58516.1    CM000361    CM002910    EDX04512.1    KMY89497.1    GBYB01004458    JAG74225.1    GGMR01015242    MBY27861.1    GGMR01005023    MBY17642.1    UFQT01000745    SSX26899.1    GBHO01019320    GBRD01003419    GDHC01019823    JAG24284.1    JAG62402.1    JAP98805.1    AXCM01000090    ABLF02036488    ATLV01013476    KE524860    KFB38033.1    GGMS01012764    MBY81967.1    AAAB01008944    EAA10322.4    CH475398    EAL29330.2    CH479180    EDW28402.1    CH964276    EDW85342.2    KK107139    EZA57694.1    KQ979608    KYN20470.1    DS235430    EEB15690.1    GL438820    EFN68413.1    KQ978324    KYM95103.1    APCN01000636    ADTU01023735    ADTU01023736    ADTU01023737    ADTU01023738    ADTU01023739    JXJN01003995    QOIP01000003    RLU24644.1    OUUW01000006    SPP81653.1    GBBI01003534    JAC15178.1    SPP81652.1    GGLE01006869    MBY10995.1    CVRI01000055    CRL01191.1    GFJQ02004438    JAW02532.1    GEDV01005911    JAP82646.1    KQ981965    KYN31843.1    GACK01006784    JAA58250.1    KZ288430    PBC25841.1    GAMC01009780    JAB96775.1    CCAG010023386    BT003541    AAO39545.1    KRT05324.1    LJIJ01000793    ODM94540.1   

Proteomes

UP000005204    UP000053268    UP000218220    UP000007151    UP000053240    UP000007266    + More
UP000235965    UP000019118    UP000030742    UP000192223    UP000092461    UP000002320    UP000005203    UP000076502    UP000009192    UP000007801    UP000001070    UP000008792    UP000002282    UP000008820    UP000001292    UP000092553    UP000069940    UP000249989    UP000000803    UP000008711    UP000000304    UP000192221    UP000075883    UP000007819    UP000075900    UP000030765    UP000075920    UP000075903    UP000007062    UP000001819    UP000008744    UP000076408    UP000075884    UP000007798    UP000053097    UP000078492    UP000009046    UP000075880    UP000000311    UP000078542    UP000075882    UP000075840    UP000005205    UP000092460    UP000279307    UP000092445    UP000092443    UP000268350    UP000091820    UP000078200    UP000095300    UP000183832    UP000069272    UP000078541    UP000242457    UP000092444    UP000094527   

PRIDE

H9J251    Q9VKY7    Q86P10   

Pfam

PF09379   FERM_N        + More
PF09380   FERM_C
PF00373   FERM_M
PF08736   FA
PF07679   I-set
PF00063   Myosin_head

Interpro

IPR018980   FERM_PH-like_C        + More
IPR029071   Ubiquitin-like_domsf       
IPR000299   FERM_domain       
IPR019747   FERM_CS       
IPR018979   FERM_N       
IPR011993   PH-like_dom_sf       
IPR019748   FERM_central       
IPR000798   Ez/rad/moesin-like       
IPR014847   FERM-adjacent       
IPR035963   FERM_2       
IPR014352   FERM/acyl-CoA-bd_prot_sf       
IPR019749   Band_41_domain       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR013783   Ig-like_fold       
IPR013098   Ig_I-set       
IPR013106   Ig_V-set       
IPR003598   Ig_sub2       
IPR036179   Ig-like_dom_sf       
IPR036961   Kinesin_motor_dom_sf       
IPR001609   Myosin_head_motor_dom       
IPR027417   P-loop_NTPase       

SUPFAM

SSF47031   SSF47031        + More
SSF54236   SSF54236       
SSF48726   SSF48726       
SSF52540   SSF52540       

Gene 3D

1.20.80.10     2.30.29.30     2.60.40.10     3.40.850.10    

CDD

cd14473  FERM_B-lobe

ProteinModelPortal

H9J251   A0A2H1VPU7   A0A194PQ68   A0A2A4J485   A0A2A4J3P0   A0A2A4J2V8   + More
A0A212FJW6   A0A0N0PAM2   D6W6N9   A0A1B6CYS5   A0A1Y1KQS4   A0A2J7R3Q3   N6TSX7   A0A2J7R3S6   A0A2J7R3S0   A0A2J7R3R3   A0A1W4XG86   A0A1W4XRA3   A0A1B0CHP0   A0A1B6L3F3   B0WPV3   A0A087ZS10   A0A154PEU2   B4KHT0   B3MPS0   A0A0C9QUZ1   B4JPY4   B4LVD7   B4NZA6   Q17BE5   B4HWL5   A0A0M3QTP3   A0A182GDD2   Q9VKY7   B3N9M1   B4Q970   A0A0C9PSY0   A0A1W4USX9   A0A2S2PEH3   A0A2S2NL20   A0A336MDB5   A0A0A9XWI4   A0A182MAW3   J9JZI4   A0A182R2J6   A0A084VJ89   A0A2S2QW22   A0A182WA08   A0A182UQW5   Q7Q844   Q29CW6   B4G7K2   A0A182Y9A6   A0A182NT53   B4NLV3   A0A026WRH3   A0A195E5K1   E0VQN4   A0A182IMJ2   E2ADQ1   A0A151I8X7   A0A182LK09   A0A182IB29   A0A158NR13   A0A1B0AV55   A0A3L8DW25   A0A1A9ZM10   A0A1A9Y5P4   A0A3B0JLC9   A0A1A9WJ43   A0A023F1K5   A0A1A9UTA3   A0A3B0JMU0   A0A2R5LNG6   A0A1I8Q1V9   A0A1J1ILS3   A0A1Z5L583   A0A131YWU2   A0A182F2U3   A0A195EUB8   L7M2I0   A0A2A3E434   W8B6G4   A0A1B0FPV8   Q86P10   A0A0R3NWK1   A0A1D2MN79  

PDB

1GG3     E-value=3.76098e-54,     Score=536

KEGG

101735392    no KO assigned | (RefSeq) FERM domain-containing protein 5

GO

GO:0008092   GO:0016021   GO:0005856   GO:0031032   GO:0016459   GO:0005524   GO:0003779   GO:0003774   GO:0005737   GO:0019898   GO:0006414   GO:0016020   GO:0051103   GO:0003677   GO:0006281   GO:0048384  

Length:

521

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.77721

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00945

outside

1  -  459

TMhelix

460  -  482

inside

483  -  521

 

 

Pi

165.414613

Theta

163.429813

Tajima's D

0.986011

CLR

0.411959

CSRT

0.656767161641918

Interpretation

Uncertain