SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03002  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003587
Annotation
protein_disulfide-isomerase_like_protein_ERp57_precursor_[Bombyx_mori]
Full name
Protein disulfide-isomerase      
Location in the cell
ER   Reliability : 4.636
 

Sequence

CDS
ATGTTCGGATCACTAAAGTTTGTTCTTTTATTAGGCATAATTTATTTATGTAAAGCGGCCGAGGAGGATGTTCTCGATCTTACAGATTCCGACTTTTCGGCTGTTTTATCTCAACATGATACAGCCCTGGTCATGTTTTACGCGCCTTGGTGCGGTCATTGTAAGAGACTAAAGCCAGAGTATGCGGTAGCCGCCGGCCTGTTAAAGACCGATGTCCCTCCGGTGGCGCTAGCTAAAGTAGACTGTACGGAAGGTGGCAAGAGTACTTGTGAACAATTCTCTGTGTCCGGATATCCTACACTGAAAATATTCAGAAAAGGAGAGCTTTCTTCCGAGTACAATGGACCAAGGGAGTCTAATGGCATTGTCAAGTACATGCGTGCCCAAGTTGGACCCAGCTCCAAGGAGCTCCTTACAGTAGCTGATTTTGAAGCTTTTACTTCTAAGGATGAAGTAGTGGTTGTCGGATTCTTCGAAAAGGAATCTGACCTGAAAGGAGAGTTCCTGAAAACAGCTGACAAATTAAGGGAGGAGGTTACTTTTGCTCATTCATCAGCCAATGAAGTTCTTGAAAAAACCGGATACAAAAACAATGTGGTCTTGTATCGTCCCAAGCGACTCCAGAACAAGTTTGAAGACTCATCTGTTGCCTTCGACGGAGACACCGAGAAAGTGTCACTCAAAGCTTTCATCAAGGAGAACTATCACGGTCTGGTCGGCGTTCGCCAAAAGGACAACATCCATGATTTCAGCAACCCCCTTATTGTCGCTTACTATGATGTTGATTATACCAAGAACCCGAAGGGCACTAACTACTGGAGGAACCGTGTCCTCAAGGTAGCCAAGGAGCAAACCGAGGCGACGTTCGCAGTCAGCGACAAGGACGACTTCACGCACGAGCTCAACGAGTTCGGCATCGACTTCGCTAAAGGCGACAAGCCCGTAGTGGCCGGCCGCGACGCAGACGGAAACAAATTCGTCATGAGCGCGGAGTTCAGCATCGAAAATCTACTAACGTTCACAAAGGACCTGCTCGATGGCAAGCTGGAGCCATTCGTGAAATCCGAGGCCATACCGGAAAACGACGGCCCAGTGAAGGTAGCCGTCGGCAAGAACTTCAAGGAACTGGTCACGGACAGCAACAGGGACGCACTCATAGAATTCTATGCGCCATGGTGCGGACACTGTCAGAAGCTTGCTCCCGTCTGGGAAGAGCTTGGTGAAAAGTTGAAAGATGAAGAAGTTGACATCATTAAGATCGATGCAACTGCAAATGACTGGCCCAAATCACAATTCGACGTTTCCGGCTTCCCCACAATCTTCTGGAAGCCTAAGGACAGCTCCAAGAAACCTCAGAGATATAATGGAGGACGTGCTCTAGAGGACTTCATCAAGTATGTTTCTGAACAAGCCACAAGCGAACTTAAGGGCTGGGACAGAAAGGGTAACGCCAAACAAGGAAAGGAAGAGTTGTAG
Protein
MFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELLTVADFEAFTSKDEVVVVGFFEKESDLKGEFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLYRPKRLQNKFEDSSVAFDGDTEKVSLKAFIKENYHGLVGVRQKDNIHDFSNPLIVAYYDVDYTKNPKGTNYWRNRVLKVAKEQTEATFAVSDKDDFTHELNEFGIDFAKGDKPVVAGRDADGNKFVMSAEFSIENLLTFTKDLLDGKLEPFVKSEAIPENDGPVKVAVGKNFKELVTDSNRDALIEFYAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKEEL

Summary

Catalytic Activity
Catalyzes the rearrangement of -S-S- bonds in proteins.
Similarity
Belongs to the protein disulfide isomerase family.
Feature
chain  Protein disulfide-isomerase
EC Number
5.3.4.1
EMBL
AB210112    BAD93614.1    AB210111    BAD93613.1    NWSH01001631    PCG70641.1    + More
KQ461187    KPJ07347.1    BABH01007426    KQ459597    KPI95105.1    AGBW02008594    OWR52961.1    AK401252    BAM17874.1    GAIX01004300    JAA88260.1    NEVH01007818    PNF35559.1    KX683312    ARE59259.1    GDAI01001505    JAI16098.1    KQ971307    EFA11421.1    HQ851370    AEV89748.1    DS235430    EEB15693.1    GEDC01022987    JAS14311.1    GEZM01095185    JAV55471.1    GECZ01030664    GECZ01024813    GECZ01022011    GECZ01014873    GECZ01012784    JAS39105.1    JAS44956.1    JAS47758.1    JAS54896.1    JAS56985.1    CH477217    EAT47483.1    GECU01032273    JAS75433.1    CVRI01000051    CRK99496.1    GGFM01000472    MBW21223.1    GDRN01053050    JAI66204.1    EU679503    ACD44938.1    GGFK01000520    MBW33841.1    GFDF01004238    JAV09846.1    GGFM01006049    MBW26800.1    GFDF01004237    JAV09847.1    GAPW01001124    JAC12474.1    GGFK01000524    MBW33845.1    JXUM01023842    KQ560673    KXJ81333.1    KU932227    MF278688    APA33863.1    ASL04994.1    GAPW01001126    JAC12472.1    AXCM01001984    UFQS01000899    UFQT01000899    SSX07566.1    SSX27906.1    GAMD01003158    JAA98432.1    GGFK01000591    MBW33912.1    GALA01001176    JAA93676.1    KA647510    AFP62139.1    ADMH02001732    ETN61268.1    DQ062787    AAY56660.1    GAPW01001125    JAC12473.1    CM000362    CM002911    EDX06676.1    KMY93054.1    CH954179    EDV56416.1    ATLV01024562    KE525352    KFB51635.1    AE013599    DQ062786    BT099537    AAF58609.2    AAY56659.1    ACU32621.1    GL766908    EFZ14477.1    CM000158    EDW90871.1    CH902619    EDV36730.1    CH480816    EDW47461.1    BT127617    AEE62579.1    GFDL01001177    JAV33868.1    AAZX01014127    AXCN02000386    LBMM01001449    KMQ96290.1    CP012524    ALC40739.1    APGK01047206    KB741077    ENN74226.1    KK107274    QOIP01000008    EZA53740.1    RLU19705.1    KB631792    ERL86146.1    AAAB01008807    EAL41801.2    APCN01000199    ABLF02031932    AK417486    BAN20701.1    KQ977041    KYN06137.1    KQ434977    KZC12816.1    GDIQ01140688    JAL11038.1    GAKP01000304    JAC58648.1    GDIQ01068613    GDIQ01045929    LRGB01001764    JAN26124.1    KZS10564.1    KQ976424    KYM88584.1    LJIG01002144    KRT84796.1    GDIQ01176906    JAK74819.1    KQ982562    KYQ54933.1    GFXV01005642    MBW17447.1    OUUW01000001    SPP74980.1    CH963894    EDW77221.1    GDIQ01043869    JAN50868.1    ADTU01028568    GBXI01000352    JAD13940.1    GDIQ01154428    JAK97297.1    GDHF01029674    GDHF01023347    GDHF01002536    JAI22640.1    JAI28967.1    JAI49778.1    GL888275    EGI63436.1   
Pfam
PF00085   Thioredoxin
Interpro
IPR036249   Thioredoxin-like_sf        + More
IPR017937   Thioredoxin_CS       
IPR005792   Prot_disulphide_isomerase       
IPR041868   PDIA3_PDI_b       
IPR013766   Thioredoxin_domain       
IPR005788   Disulphide_isomerase       
SUPFAM
SSF52833   SSF52833       
PDB
6ENY     E-value=2.69245e-114,     Score=1055

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.990476
 
 
Length:
491
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00827999999999999
Exp number, first 60 AAs:
0.00827999999999999
Total prob of N-in:
0.00060
outside
1  -  491
 
 

Population Genetic Test Statistics

Pi
238.91798
Theta
167.885338
Tajima's D
1.190783
CLR
0.2673
CSRT
0.714464276786161
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26280517 EPEDWRPAERPIQK 96.43 3e-12
25044914 EQSIYSIWAHEWTK 96.43 3e-12
27102218 DIIDGKIEPFVKSEAIPENDGPVK 96.43 3e-12
26280517 QKDEIIIEGNSIEDVSSSAAIIQQSTTVK 96.15 6e-12
27102218 ENYHGIVGVR 96.15 6e-12
26280517 VCTVASIGPHPDPK 95.65 3e-10
27102218 QKDNIHDFSNPIIVAYYDVDYTKNPK 95.65 3e-10
26822097 IEPFVK 95.65 9e-10
26280517 NNIPGAIASICVGGK 95.65 9e-10
25044914 QKADESYIVGK 95.65 9e-10
27102218 GEISSEYNGPR 95.65 9e-10
28467696 QKDEIIIEGNSIEDVSSSAAIIQQSTTVK 95.65 9e-10
26822097 GEISSEYNGPR 95.24 1e-08
26280517 DNGGIDTEQTYPYEGVDDK 95.24 1e-08
28556443 LKPEYAVAAGLLK 100.00 3e-05
26822097 IDATANDWPK 100.00 4e-05
26280517 GIVGTIIER 100.00 4e-05
25044914 SQFDVSGFPTIFWK 100.00 4e-05
24402669 SQFDVSGFPTIFWK 100.00 4e-05
27102218 EIITVADFEAFTSK 100.00 4e-05
28467696 SQFDVSGFPTIFWK 100.00 4e-05
28556443 SQFDVSGFPTIFWK 100.00 4e-05
26280517 SEAGAAGAAGGGR 100.00 1e-04
28556443 SQFDVSGFPTIFWK 100.00 2e-04
28556443 SQFDVSGFPTIFWKPK 100.00 2e-04
26822097 DIIDGK 100.00 5e-04
26280517 SKIEVIIQQIQATSK 100.00 5e-04
25044914 SQEIIAPYSKPQVTFPIWINADIIPGPVK 100.00 5e-04
24402669 SQFAGSAVAR 100.00 5e-04
28467696 SQDIYIR 100.00 5e-04
28556443 SQFDVSGFPTIFWK 100.00 5e-04
28556443 SEAIPENDGPVK 100.00 5e-04
28556443 LREEVTFAHSSANEVLEK 100.00 5e-04
28556443 LEPFVK 100.00 0.001
28556443 ALEDFIK 100.00 0.001
26822097 SEAIPENDGPVK 100.00 0.018
26280517 EADFDVAAYAFPAK 100.00 0.018
25044914 FEDENFTIK 100.00 0.018
24093152 FEDENFTIK 100.00 0.018
27102218 DAIIEFYAPWCGHCQK 100.00 0.018
28467696 FEDPQYPDEFVFPAR 100.00 0.018
28556443 ELLTVADFEAFTSK 100.00 0.018
28556443 ELLTVADFEAFTSK 100.00 0.018
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