SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02996
Pre Gene Modal
BGIBMGA003616
Annotation
PREDICTED:_phospholipid_scramblase_2_[Bombyx_mori]
Full name
Phospholipid scramblase      
Location in the cell
Extracellular   Reliability : 1.183 PlasmaMembrane   Reliability : 1.233
 

Sequence

CDS
ATGGATCTGAAAGTATTTGATCGTGAAACTGGAGTGGGCGATCGAGGAATCGATAATCCAGCTGCCACAGACGATTATGGATCCCACGTAAGACCTGATTTGGTAATTAGCGTTCAGCCGCAATCACATGGAACTCGTGCAGAATTACCAGTGACTACGGTCAACTGGCGCTCCAACCCTCGAGGTCAGTTCATCCCGGTACATGGATTGGACTTTCTAATTGGAGTTTCCAGTCTTCTAATACAACAGACCGTTGAGCTTGATGATCTGACTTCAAAAATAGAATCGGAGAATCGTTACATAGTGAGGGTACCGAATGGAGAAGCTTTGTACATCGGCAACGAAGTGTCGTGTCCAACTCAGAGATGTATCTGTGGGAATGGTCGAGCCTTTATGATGCATCTTCATGACAACACGAGGCAAGAGGCCATGGTGCTGAAGCGAAGGTTGGCAGGGGCATCTTGTTTGTGGCCTTGTCGACTGCAAGAAATGAAAGTGATAACGCCTCCAGGCGACTACGTGGGACGTATCCAACAAAGCTGTACATGGATGATACCAGAGTACAGGGTTAGGGACGCCAACGACCAGACCCTGTTCATTATTGAAGGTCCAGCCGTATTGAAGAGAAGTGCTTTGATGTTATCCGAGTTTAAGATTCTGACTGCAGATTCCTCGAGAATCGTGGGACGGATAGCCCATGGCTGGGATCGTAATCTCGTCAGCTTCGCGACAACTCTCCAAATCCCTGATACAGCTGTACAACCTAAACATAAAGCATTGCTACTGGCCGCTACGTTTTTATTGGAGTACACATATTTTGAAAGAACAAAATCGAGTTGTACGAGATGCCTTTTTTGCTGA
Protein
MDLKVFDRETGVGDRGIDNPAATDDYGSHVRPDLVISVQPQSHGTRAELPVTTVNWRSNPRGQFIPVHGLDFLIGVSSLLIQQTVELDDLTSKIESENRYIVRVPNGEALYIGNEVSCPTQRCICGNGRAFMMHLHDNTRQEAMVLKRRLAGASCLWPCRLQEMKVITPPGDYVGRIQQSCTWMIPEYRVRDANDQTLFIIEGPAVLKRSALMLSEFKILTADSSRIVGRIAHGWDRNLVSFATTLQIPDTAVQPKHKALLLAATFLLEYTYFERTKSSCTRCLFC

Summary

Description
May mediate accelerated ATP-independent bidirectional transbilayer migration of phospholipids upon binding calcium ions that results in a loss of phospholipid asymmetry in the plasma membrane.
Cofactor
Ca(2+)
Similarity
Belongs to the phospholipid scramblase family.
EMBL
NWSH01001547    PCG70898.1    GDQN01010821    JAT80233.1    ODYU01007111    SOQ49596.1    + More
KQ459597    KPI95097.1    AGBW02012195    OWR45472.1    BABH01007434    KQ461187    KPJ07340.1    GECU01014404    JAS93302.1    GEDC01020451    GEDC01007463    JAS16847.1    JAS29835.1    NEVH01009398    PNF33133.1    PNF33132.1    GALX01003562    JAB64904.1    GALX01003563    JAB64903.1    GEZM01003858    JAV96523.1    KQ971307    KYB29660.1    EFA11407.1    GBBI01000423    JAC18289.1    KK852554    KDR21466.1    GFTR01004481    JAW11945.1    GDHC01012834    JAQ05795.1    GDHC01021076    JAP97552.1    PYGN01000957    PSN38929.1    BT127023    AEE61985.1    APGK01047232    APGK01047233    KB741077    KB631792    ENN74254.1    ERL86119.1    CH902619    EDV35522.2    CM000158    EDW90042.1    GBBI01000428    JAC18284.1    CH916367    EDW01183.1    CH954179    EDV56534.1    CH963846    EDW72523.1    CH933808    EDW08129.1    CM000071    EAL26591.1    CH479213    EDW33341.1    AE013599    AAM68719.1    CH940662    EDW58777.1    OUUW01000001    SPP73976.1    AY071050    AAL48672.1    BT044335    ACH92400.1    GBXI01001849    JAD12443.1    KRF78479.1    JRES01001578    KNC21865.1    SPP73975.1    CH480816    EDW47344.1    GAMC01006907    JAB99648.1    AK418186    BAN21401.1    GFDG01001015    JAV17784.1    GAMC01006905    JAB99650.1    GDHF01004491    JAI47823.1    KRF97591.1    GAKP01019152    JAC39800.1    GDHF01025105    GDHF01023532    GDHF01018295    JAI27209.1    JAI28782.1    JAI34019.1    CM000362    CM002911    EDX06567.1    KMY92913.1    AGB93417.1    GAKP01019151    JAC39801.1    GAMC01006904    JAB99651.1    GDIP01203449    JAJ19953.1    UFQT01000126    SSX20523.1    GL732546    EFX80807.1    GDIQ01245465    LRGB01003375    JAK06260.1    KZS02915.1    ADMH02002096    ETN59256.1    GDIQ01095111    JAL56615.1    GDIP01203448    JAJ19954.1    GEZM01103143    GEZM01103142    JAV51526.1    KK853500    KDR07158.1    GG666629    EEN47544.1    GECU01034927    GECU01013232    JAS72779.1    JAS94474.1    GEBQ01013755    JAT26222.1    GDIQ01089294    JAN05443.1    GDIQ01089295    JAN05442.1    GDIQ01091689    JAL60037.1    FR915643    CDQ93644.1    GFDF01000838    JAV13246.1    GEBQ01012851    JAT27126.1    ACPB03021686    APCN01003602    DS235833    EEB18126.1    GBHO01025937    GBHO01025936    GDHC01020916    GDHC01012357    GDHC01004641    JAG17667.1    JAG17668.1    JAP97712.1    JAQ06272.1    JAQ13988.1    NEVH01008299    PNF34190.1    AXCN02000574    PNF34192.1    PNF34198.1    GEDC01002799    JAS34499.1   
Pfam
PF03803   Scramblase        + More
PF00023   Ank
PF02493   MORN
Interpro
IPR005552   Scramblase        + More
IPR002110   Ankyrin_rpt       
IPR003409   MORN       
IPR020683   Ankyrin_rpt-contain_dom       
IPR036770   Ankyrin_rpt-contain_sf       
IPR025659   Tubby-like_C       
SUPFAM
SSF48403   SSF48403        + More
SSF54518   SSF54518       
Gene 3D

Ontologies

Topology

Length:
286
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0943600000000001
Exp number, first 60 AAs:
6e-05
Total prob of N-in:
0.04469
outside
1  -  286
 
 

Population Genetic Test Statistics

Pi
279.973367
Theta
171.311639
Tajima's D
1.844597
CLR
0.499804
CSRT
0.854357282135893
Interpretation
Uncertain
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