SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02979
Pre Gene Modal
BGIBMGA003625
Annotation
PREDICTED:_uncharacterized_protein_LOC101737074_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.377
 

Sequence

CDS
ATGGTGTCTAGACGTCGAATATTATCGCGGTCACGCGACAACCTGTCGCAAACACTCACTCAGGAAGAGGAGGAAGACGTATGGTATCAAAAGGATAAGCTTTATAAGGAACATATACAGGAAGTGCTGGACAAATGGACACAAATCGACGACGAGATATGGGCGAAGGTGATTGTTTTCGAGAAGAATCGTCGCGTTGCCAAAGCGTATGCGCGAGCGCCGGTGCTCACGATTAATGGGTCCGATGACGGCTTTGACGGCATGAGAATTGGTCTATGCGGCTTCGATAATCCACATAGAGATCAGAAGACGGATGAATTGAAAAGACACGTAGGACAGGGTGTCAAAATCAAAATGGACGACGCCGGTAATATACTCATCAGACGCTACTCCAAGAGTAGCGTGTTTGTGAAGAGTACTGCAGCCTCTAGCAATGAAGAGACGGCCATCGGACAAGATATACTCAAACTGCCCGGATATTCGTTGGAGCAGGAAAAGATTTTTAAGTTGTTCGACATGAAGAAGTTCCAGTCAAACGTGAACCGGGAGTTGCGGCGCGCGTATCCGGACCGAAGAAGGCTTGAGACCCAGTGTCTCAGTGCTGTAGCATTTGTCAAGTCTGACAACGAACTCCTCGAGTGCCCCATCTGGGTGCTGGTCATCAACGTCGTCGCTATGGACATGCTGAAATCCAAGCTCCCCCCAATTCAAAGACCAATGGACATCAAGAACCGGCCCCGTATTCCAATTCCCGACGAGGATCCGTACAGCATCGCCAGTTCGAATGTCAACGGCTCCGGGTCAAGCGGCAGTTCAGGAGGCTACGGACTCGGCAACGGTCACAACGGACACGGAGTCGTCGCGGCTACTAGGGAGCAGCTGATGATGCAGATGGGTCAAAGGCGAGGAGAGAGACCACCTAATCTACCGCCCAGGGAGAATGGATATGGACCAGCTGATATTCCGAAGCCGGATTATGATGACATCGAGGCTAACGGTCGCGGTCCAGCGCAGTTTCCGAGAGGAAAATCAGACAAAGGCAAAGAAAAGAAATATGACGACCCCTACTATTGCGGGCTACGCGCCCGTGTGCCAAACTTCGTGAAGGCGAACGGAGCTAAAGTCCTCCCGACGATGACGGAGCGGCTCACGCTGAAGGAGGTGCCGGTGCCGAGCAAGCGGTTCAGCGTGGCGCACCCCCACGGCGCCCCTTACCCCCCGCACCCGCACATGCCCCCCGCTGCTCTCTGGCACGCGCGCTCCTACGAAAGCGGAATCGACGGAGATCATTACGATCCATACGCGTTGTACGGGCGGCTTCCGGTGCCTGGTCGTGGCTTCCCTCCGCCTCCCGCGCCTCATGCACGACACATGTTCATTGGAGATTGGGATTAA
Protein
MVSRRRILSRSRDNLSQTLTQEEEEDVWYQKDKLYKEHIQEVLDKWTQIDDEIWAKVIVFEKNRRVAKAYARAPVLTINGSDDGFDGMRIGLCGFDNPHRDQKTDELKRHVGQGVKIKMDDAGNILIRRYSKSSVFVKSTAASSNEETAIGQDILKLPGYSLEQEKIFKLFDMKKFQSNVNRELRRAYPDRRRLETQCLSAVAFVKSDNELLECPIWVLVINVVAMDMLKSKLPPIQRPMDIKNRPRIPIPDEDPYSIASSNVNGSGSSGSSGGYGLGNGHNGHGVVAATREQLMMQMGQRRGERPPNLPPRENGYGPADIPKPDYDDIEANGRGPAQFPRGKSDKGKEKKYDDPYYCGLRARVPNFVKANGAKVLPTMTERLTLKEVPVPSKRFSVAHPHGAPYPPHPHMPPAALWHARSYESGIDGDHYDPYALYGRLPVPGRGFPPPPAPHARHMFIGDWD

Summary

EMBL
AGBW02008676    OWR52820.1    AAAB01008807    EAA04134.4    CH480816    EDW47468.1    + More
GFDF01006438    JAV07646.1    CH963894    EDW77216.1    CM002911    KMY93061.1    AE013599    AAF58603.2    CH940662    EDW58737.1    KRF78442.1    CM000071    EDY69474.1    CH479210    EDW32927.1    CH916367    EDW01523.1    CH933808    EDW08418.1    BT010005    AAQ22474.1    BT050452    AAM68700.2    ACJ13159.1    CM000362    EDX06684.1    KMY93060.1    CP012524    ALC40734.1    CM000158    EDW90865.1    OUUW01000001    SPP74987.1    CH954179    EDV56410.1    CH902619    EDV36736.1    GDHF01014530    GDHF01002056    JAI37784.1    JAI50258.1    KQS62867.1    KQS62868.1    KRJ99500.1    KRJ99501.1    KPU76390.1    KPU76391.1    GEZM01063668    JAV69029.1    CH477217    EAT47469.1    AXCM01001831    AXCN02000384    KQ971307    EFA11288.1    CVRI01000051    CRK99486.1    GEZM01063667    JAV69030.1    UFQS01000004    UFQT01000004    SSW96834.1    SSX17221.1    JTDY01001619    KOB73337.1    GBHO01025378    GBHO01025377    GBHO01025374    GBHO01025373    GBRD01009084    GBRD01009083    JAG18226.1    JAG18227.1    JAG18230.1    JAG18231.1    JAG56737.1    GGFJ01005549    MBW54690.1    GBRD01009085    GBRD01009082    JAG56739.1    GBBI01002349    JAC16363.1    GL444608    EFN60822.1    KQ977110    KYN05693.1    GL770679    EFZ10047.1    KQ978881    KYN27822.1    GGFJ01005327    MBW54468.1    KQ981693    KYN37634.1    GGMS01011887    MBY81090.1    GEBQ01000679    JAT39298.1    GL887908    EGI69453.1    KK107021    QOIP01000011    EZA62406.1    RLU16614.1    KQ414592    KOC70215.1    GL451091    EFN80077.1    GGMS01012760    MBY81963.1    GFXV01004956    MBW16761.1    GGMR01019182    MBY31801.1    KQ434809    KZC06480.1    ABLF02029248    ABLF02029249    GEBQ01027761    JAT12216.1    AAZX01003235    GECZ01020871    GECZ01014264    JAS48898.1    JAS55505.1    KQ982472    KYQ56088.1    GECZ01012325    GECZ01009037    JAS57444.1    JAS60732.1    NNAY01000097    OXU31002.1    KQ435756    KOX75959.1    GDHC01001255    JAQ17374.1    KZ288473    PBC25312.1    JR040740    JR040741    AEY59269.1    AEY59270.1    KQ761155    OAD58164.1    KQ976537    KYM81378.1    DS235793    EEB17140.1    GBYB01003185    JAG72952.1    GDIP01240334    GDIQ01123336    GDIQ01095286    JAI83067.1    JAL56440.1    GDIQ01231496    JAK20229.1    GDIP01194688    JAJ28714.1    GDIQ01123334    JAL28392.1    GDIP01240335    GDIQ01051775    JAI83066.1    JAN42962.1    GDIQ01123335    JAL28391.1    GDIQ01163270    JAK88455.1    GDIQ01065809    JAN28928.1    GDIP01125811    JAL77903.1    GDIQ01142786    JAL08940.1    GDIQ01161967    JAK89758.1    LRGB01000512    KZS18840.1   
Pfam
PF03166   MH2
Interpro
IPR017855   SMAD-like_dom_sf        + More
IPR001132   SMAD_dom_Dwarfin-type       
IPR008984   SMAD_FHA_dom_sf       
SUPFAM
SSF49879   SSF49879       
Gene 3D
PDB
4R9P     E-value=6.10457e-115,     Score=1060

Ontologies

Topology

Length:
464
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02276
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01469
outside
1  -  464
 
 

Population Genetic Test Statistics

Pi
230.897451
Theta
181.643913
Tajima's D
0.982138
CLR
0.47404
CSRT
0.660516974151292
Interpretation
Uncertain
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