SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02978  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003579
Annotation
putative_serine_protease_K12H4.7_[Operophtera_brumata]
Location in the cell
PlasmaMembrane   Reliability : 1.798
 

Sequence

CDS
ATGTTGTTTATTGGGACTAACATAATTCTCGCTTGTATTAGTGTTGGTTTTGGATTTGTACTGAACGGACTCGGAAATAGGTACAGACATTTGCTTCAAGATATAAATTCAACGCTGACGTCATTTGATACATCGTCTATCAAAATCAAATGGATAGAGCAGCCTTTAGATCATTTCGATAAAAAAAATATAAATACTTGGAATATGAGGTATATGGAAAGATTAGATAAATGGAAGAAAGATGGTCCTATATACCTATTTATGTACGGTGAGGGTGAAGCAAGTCAGGTATTTCTTCAAACTGGTATTTTGTATGAATTAGCCGAGGAAACAAACGGGGCTATGTTGCTATCTGAACACAGATACTATGGAAAGAGCAAGCCTTTTGAAGAACTCACAACTGAAAATCTAAAGTTCCTAAGTTCAAGGCAAGCACTCGCAGATACTGCTAGATTGTTGGAATTAGTCAAATCAGAACCTCAATATGAAAATTCGAAAATTGTTGTTGTTGGAGGATCATACGCAGGTAATTTGGCTGCTTGGATGAGACTACTGTATCCCAATTTAATTAATGCTGCTATAGCCAGTAGCGCTCCGGTATTAGCAAAGAAAGATTTCTACGAATATTTAGAACACGTCAGCGATGATTTTGAACAACACGGTACTGAAGACTGTATGGAGAAAATTAATGAAATTTTTACTACATACGAGAAACGATTTCGAACAGTAGATGGCATTAAACAACTTAAAAAGGAGGAGTACATCTGTGAAGACACCGATATGACGAAAGTCGAAAATCAGCAATTATTCTTTTTGGATAAAAGCTCTGCATTTATGTACATTGCACAATACGGGAACCCAGATGTCATCAAGACGTATTGCGAAGATATTAAAAATACCTCTCTTGTATTTTCTTCTAAAGTAGATGAAAACGATTTTTACGACACTAAAAATAATTGTTACGATTATGAATTTGAAGAAATGATTCAAAACACGAAAGAAATAGACTGGCTCGTTTCATGGACATATCAAACTTGTACTGAATTCAGTTACTTTCCGAGCACATCATCAAACAAACATCCTTTTACTGATAATATAAGTATGGACCTGTTTTATAAAATGTGTACTAAAACTTTTGGTCCGAACTTTGACGAAAAGAGAATAGAGGCTGGGGTTATGGAAACCAATATGATGTATGGTGGATTAACTCCTAATGTAACAAAGGTGGTATTTGTTAACGGTGATCTAGACCCATATCATAGATTAAGTATTCTAGAAGATTTATCTTATGAAGCTCCAGCAAAAGTTATTCCACGTACATCCCATTGCAGAGATTTATTTTCAAACAGATCTGGCGACCCTGAAGAACTTATCGAAGCCAGGTATTATATAAAATATTTGATAAAAAAATGGATAGGTCTTGGTGACTATAACAAACCAAATGAAATAAAGCACACAACCTAG
Protein
MLFIGTNIILACISVGFGFVLNGLGNRYRHLLQDINSTLTSFDTSSIKIKWIEQPLDHFDKKNINTWNMRYMERLDKWKKDGPIYLFMYGEGEASQVFLQTGILYELAEETNGAMLLSEHRYYGKSKPFEELTTENLKFLSSRQALADTARLLELVKSEPQYENSKIVVVGGSYAGNLAAWMRLLYPNLINAAIASSAPVLAKKDFYEYLEHVSDDFEQHGTEDCMEKINEIFTTYEKRFRTVDGIKQLKKEEYICEDTDMTKVENQQLFFLDKSSAFMYIAQYGNPDVIKTYCEDIKNTSLVFSSKVDENDFYDTKNNCYDYEFEEMIQNTKEIDWLVSWTYQTCTEFSYFPSTSSNKHPFTDNISMDLFYKMCTKTFGPNFDEKRIEAGVMETNMMYGGLTPNVTKVVFVNGDLDPYHRLSILEDLSYEAPAKVIPRTSHCRDLFSNRSGDPEELIEARYYIKYLIKKWIGLGDYNKPNEIKHTT

Summary

EMBL
BABH01007474    NWSH01005531    PCG64148.1    JTDY01001619    KOB73334.1    PCG64146.1    + More
ODYU01005773    SOQ46987.1    KQ460226    KPJ16489.1    KQ459597    KPI95084.1    MF319736    ASJ26450.1    AGBW02008676    OWR52821.1    KQ434846    KZC08379.1    KK107111    EZA58932.1    KQ435724    KOX78447.1    GL888128    EGI66772.1    ADTU01019141    GL450824    EFN80400.1    KQ414758    KOC61505.1    KQ978957    KYN26958.1    KQ982320    KYQ57780.1    KQ981866    KYN34129.1    KQ976488    KYM83571.1    NNAY01002105    OXU22074.1    KQ978501    KYM93462.1    GL764272    EFZ18031.1    GFDL01007637    JAV27408.1    GFDL01007656    JAV27389.1    GAMD01000569    JAB01022.1    ADMH02002101    ETN59152.1    ATLV01019089    KE525262    KFB43595.1    GFDL01007775    JAV27270.1    GDRN01103633    JAI58048.1    AXCN02001508    AAAB01008987    EAA01781.5    CH477867    EAT35480.1    GL442330    EFN63566.1    DS232895    EDS26459.1    APCN01000826    PZQS01000014    PVD19043.1    GFDL01007441    JAV27604.1    KQ982182    KYQ59185.1    KZ288187    PBC34711.1    EDS26460.1    GAPW01001214    GEHC01000588    JAC12384.1    JAV47057.1    GECU01008716    JAS98990.1    KQ981410    KYN41918.1    GL888365    EGI62155.1    GECU01023610    JAS84096.1    KQ977279    KYN03978.1    GECU01027362    JAS80344.1    KQ979440    KYN21502.1    NEVH01013592    PNF28388.1    MRZV01001613    PIK36813.1    GL768066    EFZ12594.1    GFDF01005781    JAV08303.1    GL732525    EFX88622.1    UFQS01001724    UFQT01001724    SSX12010.1    SSX31528.1    GEDC01026876    JAS10422.1    ADTU01014274    NEDP02005555    OWF38769.1    DS235832    EEB18067.1    CH933806    EDW14838.2    HACG01027807    HACG01027808    CEK74672.1    CEK74673.1    FX985297    BAX07310.1    JYDN01000011    KRX66431.1    KB203083    ESO86391.1    LSMT01000886    PFX13834.1    LJIG01022644    KRT79472.1    GAKP01007297    GAKP01007296    JAC51655.1    ABLF02021908    ABLF02021912    CVRI01000042    CRK95698.1    JYDL01000026    KRX23231.1    GECU01005922    JAT01785.1    LVZM01017505    OUC42462.1    EDW14839.2    GL451975    EFN78126.1    GDIQ01186157    GDIP01089752    JAK65568.1    JAM13963.1    GFDF01005785    JAV08299.1    GFDF01005784    JAV08300.1    GECZ01001513    JAS68256.1    GDIP01200934    JAJ22468.1    JYDQ01000003    KRY23476.1    AXCM01003685    KK852542    KDR21723.1   
Pfam
PF05577   Peptidase_S28
Interpro
IPR029058   AB_hydrolase        + More
IPR008758   Peptidase_S28       
IPR042269   Ser_carbopepase_S28_SKS       
SUPFAM
SSF53474   SSF53474       
Gene 3D
PDB
3N2Z     E-value=1.37315e-40,     Score=419

Ontologies

Topology

Length:
487
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.56349
Exp number, first 60 AAs:
19.373
Total prob of N-in:
0.74335
POSSIBLE N-term signal
sequence
inside
1  -  1
TMhelix
2  -  24
outside
25  -  487
 
 

Population Genetic Test Statistics

Pi
199.061508
Theta
176.072067
Tajima's D
0.515635
CLR
0.227714
CSRT
0.515974201289936
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
29197581 ISIIEDISYEAPAK 95.65 4e-10
29197581 IIESVK 95.45 2e-09
29197581 KDFYEYIEHVSDDFEQHGTEDCMK 100.00 0.023
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