Gene

KWMTBOMO02974  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003627

Annotation

hypothetical_protein_SINV_14695?_partial_[Solenopsis_invicta]

Location

Bomo_Chr5(-):14739320-14790523      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.243 Mitochondrial   Reliability : 1.386

CDS

ATGGGGAAGCTTCTCTCGAAGATATTCGGTAACAAGGAGATGAGAATACTGATGCTGGGACTCGACGCTGCTGGAAAGACTACCATTTTATATAAGTTAAAATTAGGTCAGTCTGTCACGACAATACCGACAGTGGGCTTCAACGTTGAAACCGTAACGTATAAGAACGTCAAATTTAATGTCTGGGACGTCGGGGGGCAGGACAAAATACGGCCGCTGTGGAGGCATTACTACACAGGCACTCAGGGCCTGATATTCGTTGTGGACTGCGCGGACCGCGACCGTATCGACGAGGCCCGCCAGGAATTGCACAGGATCATAAACGACAGGGAGATGCGGGACGCCATCATACTCATATTCGCCAACAAACAGGATCTACCTGACGCGATGAAACCGCACGAGATACAAGAGAAACTGGGGCTGACCCGCATCCGGGACCGGAACTGGTACGTGCAGCCGTCGTGCGCGACGACCGGCGACGGACTGTACGAGGGGCTCACGTGGCTCACCAGCAATCATAAGTTATGA

Protein

MGKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATTGDGLYEGLTWLTSNHKL

Similarity

Belongs to the small GTPase superfamily. Arf family.

Uniprot

A0A1B6IBG6   E9J4R7   A0A232F5N9   A0A151IE20   A0A154PRU9   A0A0L7QUF4   + More
F4X4R6   T1E337   A0A151HYB4   A0A2A3ELN0   A0A2J7RKN0   A0A0M9A7W3   A0A1B6GVC7   A0A195ET55   A0A158NSF1   E2AX37   A0A165VG46   A0A1B6BZJ5   V9IBQ5   A0A1B6MLP4   A0A0C9RFG9   A0A026WZ49   A0A1L8DVQ9   A0A2A4JBB6   A0A0N1PJH4   A0A1E1WH37   A0A2H1V215   A0A1B0DPE8   A0A194PNS6   T1IZ00   E2C8J1   Q1HQT1   A0A1Q3G1Z1   A0A182Y826   A0A182M9U3   A0A182PIP0   A0A182R0S5   A0A182V4T4   A0A182N9F8   A0A182K1D3   A0A182WBD3   A0A182TGF9   B0X466   E0VHZ9   A0A182L3U1   A0A182WWD0   A0A182RJF5   A0A023EI61   A0A182I6K9   A0A067QUD3   A0A2M3ZAC1   A0A2M4AQ24   A0A087ZM30   A0A084W680   A0A182IKT2   A0A182FGR5   U5ELG0   A0A1S3CYR1   Q17BN9   S4PEW9   A0A212FKH6   A0A1S3HU42   V5GG98   D6W7V9   A0A0T6B3G5   A0A1Y1LHF4   A0A1W4WJG0   T1IF41   A0A023F5V5   A0A147A565   A0A1A8GBV6   A0A1A7WZ49   A0A1A8I852   A0A1A8DE18   A0A1A8B203   A0A0K8TQE6   A0A087YQL1   I3KYB4   A0A060XDW9   B5X494   M4AYI0   A0A3B4EZP9   A0A3P9C0R3   A0A2I4BLY9   W5NMF1   C1BM37   A0A060WSN7   A0A315VV46   A0A2U9CIX8   A0A1A8SCS7   A0A1A8NBH0   A0A1A8K0R8   A0A0S7L8Z1   A0A1A7X2M0   Q6P2U5   A0A1W4ZLZ6   A0A2D0RJS5   A0A1A8ECM3   A0A1A8HLZ5   A0A1S3MB69  

Pubmed

21282665    28648823    21719571    24330624    21347285    20798317    + More
24508170    30249741    26354079    17204158    25244985    20566863    20966253    24945155    26483478    24845553    20920257    24438588    17510324    23622113    22118469    18362917    19820115    28004739    25474469    26369729    25186727    24755649    20433749    23542700    29703783    23594743   

EMBL

GECU01027933    GECU01023421    GECU01018902    GECU01018590    GECU01013330    JAS79773.1    + More
JAS84285.1    JAS88804.1    JAS89116.1    JAS94376.1    GL768112    EFZ12210.1    NNAY01000872    OXU26124.1    KQ977894    KYM98948.1    KQ435078    KZC14467.1    KQ414735    KOC62273.1    GL888679    EGI58489.1    GALA01000725    JAA94127.1    KQ976730    KYM76465.1    KZ288215    PBC32610.1    NEVH01002717    PNF41394.1    KQ435716    KOX79055.1    GECZ01003412    JAS66357.1    KQ981993    KYN31064.1    ADTU01024892    GL443520    EFN61987.1    KT984807    AMZ00359.1    GEDC01030913    JAS06385.1    JR037960    JR037961    AEY58057.1    AEY58058.1    GEBQ01031883    GEBQ01026198    GEBQ01010826    GEBQ01003164    JAT08094.1    JAT13779.1    JAT29151.1    JAT36813.1    GBYB01011862    GBYB01011863    JAG81629.1    JAG81630.1    KK107061    QOIP01000014    EZA61335.1    RLU15117.1    GFDF01003560    JAV10524.1    NWSH01002144    PCG69056.1    KQ460226    KPJ16486.1    GDQN01004776    JAT86278.1    ODYU01000300    SOQ34806.1    AJVK01008050    AJVK01008051    AJVK01008052    KQ459597    KPI95081.1    JH431701    GL453666    EFN75721.1    DQ440363    ABF18396.1    GFDL01001269    JAV33776.1    AXCM01016960    AXCN02000560    DS232330    EDS40143.1    DS235174    EEB13005.1    JXUM01040422    JXUM01091369    JXUM01091370    JXUM01091371    JXUM01091372    JXUM01091373    GAPW01005003    KQ563907    KQ561244    JAC08595.1    KXJ73086.1    KXJ79236.1    APCN01003657    KK853253    KDR09315.1    GGFM01004735    MBW25486.1    GGFK01009556    MBW42877.1    GGFL01004227    MBW68405.1    ATLV01020755    KE525307    KFB45724.1    AXCP01001420    GANO01001421    JAB58450.1    CH477319    EAT43674.1    GAIX01004307    JAA88253.1    AGBW02008033    OWR54241.1    GALX01005482    JAB62984.1    KQ971307    EFA11143.1    LJIG01015994    KRT81932.1    GEZM01055251    GEZM01055250    JAV73064.1    ACPB03011946    GBBI01002148    JAC16564.1    GCES01012629    JAR73694.1    HAEC01000476    SBQ68553.1    HADW01009575    SBP10975.1    HAED01007050    HAEE01011226    SBQ93230.1    HADZ01014723    HAEA01003168    SBQ31648.1    HADY01022261    HAEJ01001873    SBP60746.1    GDAI01001503    JAI16100.1    AYCK01015200    AERX01030270    FR905227    FR908043    CDQ77412.1    CDQ87628.1    BT045863    ACI34125.1    AHAT01003726    BT075666    ACO10090.1    FR904590    CDQ67605.1    NHOQ01001000    PWA27466.1    CP026259    AWP16545.1    HAEH01016664    HAEI01013269    SBS15738.1    HAEF01005384    HAEG01001912    SBR66204.1    HAED01017250    HAEE01005792    SBR25812.1    GBYX01180866    GBYX01180864    JAO85921.1    HADW01010876    HADX01015309    SBP12276.1    CT027758    CU693483    BC064293    BC154500    AAH64293.1    AAI54501.1    HADZ01007437    HAEA01014876    SBQ43356.1    HAEB01002134    HAEC01015992    SBQ84213.1   

Proteomes

UP000215335    UP000078542    UP000076502    UP000053825    UP000007755    UP000078540    + More
UP000242457    UP000235965    UP000053105    UP000078541    UP000005205    UP000000311    UP000053097    UP000279307    UP000218220    UP000053240    UP000092462    UP000053268    UP000008237    UP000076408    UP000075883    UP000075885    UP000075886    UP000075903    UP000075884    UP000075881    UP000075920    UP000075902    UP000002320    UP000009046    UP000075882    UP000076407    UP000075900    UP000069940    UP000249989    UP000075840    UP000027135    UP000030765    UP000075880    UP000069272    UP000079169    UP000008820    UP000007151    UP000085678    UP000007266    UP000192223    UP000015103    UP000265000    UP000028760    UP000005207    UP000193380    UP000087266    UP000002852    UP000261460    UP000265160    UP000192220    UP000018468    UP000246464    UP000000437    UP000192224    UP000221080   

Pfam

PF00025   Arf

Interpro

IPR027417   P-loop_NTPase        + More
IPR041838   Arf6       
IPR006689   Small_GTPase_ARF/SAR       
IPR005225   Small_GTP-bd_dom       

SUPFAM

SSF52540   SSF52540       

CDD

cd04149  Arf6

ProteinModelPortal

A0A1B6IBG6   E9J4R7   A0A232F5N9   A0A151IE20   A0A154PRU9   A0A0L7QUF4   + More
F4X4R6   T1E337   A0A151HYB4   A0A2A3ELN0   A0A2J7RKN0   A0A0M9A7W3   A0A1B6GVC7   A0A195ET55   A0A158NSF1   E2AX37   A0A165VG46   A0A1B6BZJ5   V9IBQ5   A0A1B6MLP4   A0A0C9RFG9   A0A026WZ49   A0A1L8DVQ9   A0A2A4JBB6   A0A0N1PJH4   A0A1E1WH37   A0A2H1V215   A0A1B0DPE8   A0A194PNS6   T1IZ00   E2C8J1   Q1HQT1   A0A1Q3G1Z1   A0A182Y826   A0A182M9U3   A0A182PIP0   A0A182R0S5   A0A182V4T4   A0A182N9F8   A0A182K1D3   A0A182WBD3   A0A182TGF9   B0X466   E0VHZ9   A0A182L3U1   A0A182WWD0   A0A182RJF5   A0A023EI61   A0A182I6K9   A0A067QUD3   A0A2M3ZAC1   A0A2M4AQ24   A0A087ZM30   A0A084W680   A0A182IKT2   A0A182FGR5   U5ELG0   A0A1S3CYR1   Q17BN9   S4PEW9   A0A212FKH6   A0A1S3HU42   V5GG98   D6W7V9   A0A0T6B3G5   A0A1Y1LHF4   A0A1W4WJG0   T1IF41   A0A023F5V5   A0A147A565   A0A1A8GBV6   A0A1A7WZ49   A0A1A8I852   A0A1A8DE18   A0A1A8B203   A0A0K8TQE6   A0A087YQL1   I3KYB4   A0A060XDW9   B5X494   M4AYI0   A0A3B4EZP9   A0A3P9C0R3   A0A2I4BLY9   W5NMF1   C1BM37   A0A060WSN7   A0A315VV46   A0A2U9CIX8   A0A1A8SCS7   A0A1A8NBH0   A0A1A8K0R8   A0A0S7L8Z1   A0A1A7X2M0   Q6P2U5   A0A1W4ZLZ6   A0A2D0RJS5   A0A1A8ECM3   A0A1A8HLZ5   A0A1S3MB69  

PDB

6BBQ     E-value=1.94238e-99,     Score=921

KEGG

101737365    K07941 ADP-ribosylation factor 6 | (RefSeq) ADP-ribosylation factor 6

PATHWAY

04144    Endocytosis - Bombyx mori (domestic silkworm)

GO

GO:0005525   GO:0005737   GO:0016192   GO:0006886   GO:0060998   GO:0001726   GO:0030139   GO:0055038   GO:0005768   GO:0036010   GO:0055113   GO:0035622   GO:0005622   GO:0007264   GO:0015379   GO:0016021   GO:0003909   GO:0051103   GO:0003677   GO:0006281   GO:0048384   GO:0003924  

Length:

175

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02591

Exp number, first 60 AAs:

0.0201

Total prob of N-in:

0.02945

outside

1  -  175

 

 

Pi

214.187825

Theta

173.987902

Tajima's D

0.392016

CLR

0.885844

CSRT

0.485475726213689

Interpretation

Uncertain