SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02965
Annotation
PREDICTED:_uncharacterized_protein_LOC101738091_isoform_X1_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.848
 

Sequence

CDS
ATGGATAATGGAACAAAAGAGGAAAAGAATCGTATTTGGGATTACGCTGTTTGTTTCGGGACAGTTATCACATTCATAGCCGGCATTGGTCACGTAAATTCATTTGGATTGATTTACAGAGATTTTATGATCCACACTCAATCCACTACTAAGTCGTTGACAACTGCCAATGGCGTATTTGCCATAATGCTAGCAATCGGAGGTATTATTCTCAATATTATTACCAAGAAATTAACGCTAAGACAGTGCGGTCTGATCGGTTCTTGTATATTTTCGACCGGATCGTTTCTAACAATACTGATCTCGAATACTAATCATCTACCGTTCACGTTTGGTGTGCTGCAAGGTATCGGCTTTGGGATCCTGGTCCCGGTGTGCTATTCAACATTGAATTTACTTTTCACGACAAAAAGAACAACAGTTATGAGCATAATAAAATCATTACAAGGAATAATATTAATGTGGTATCCGCAAGTTATTAAACAGACGTTATCTGTTTACGGCTTCAGAGGGACGCTGCTAATCATTTTTGGAATTTCATTGCATACTTTTCCCGGAATGTTATTAATGAAGACAGAAAATAAGGATACTGGAAAGAGACTAAGAACAGCAAAAAATATAGAGATCGAAACAGACAAACAAATAAAATTAGAGTTATTAAATAACGATGAACAGAAACAACAAATTCTAAGCGATAATGGAACTGAATACAAGACGTCGAAGAAAAATAGGTTTCACTTCTTAGAAGTACTGAATCTGAGATGCCTTAAAGATCCCGTCTATTGCAATATTTGTGTCGGTCAGAGTTTTATGAATTTCTCCGATTTGACTTTCTTCATTTTACAGCCGATGCTTTTGTTTCAATACGGATACGACAAGGCGCAAGTCGCTACTTGTATTACAATTGGGACAGGAGCTGACGTGGCGGGCCGACTGGCCCTGGCCATGATTAGTGGTGCGACACATATTAACACCAGATTATTGTACTACGTTGCTACGCTGCTCACGTTGGTCGTAAGATTAGTTTTACTTCAAATCCATGAATTCATCTGGGTAGCAGCCATTACAGCTGTGCTGGGTATACTCCGAGCATGGATCCACATAGCCAGTCCTCTGGTAATTTCTAATCACGTCACCCACGAAGACTTTGCTGGGGCATACGCTCTGTTCATGCTTGCTGCGGGCGTGGTCAATTTAACGTGTTCACCTTTTATAGGCATGATTAAGGATTCGTATGAAGACTATGTACCTGCATTCTATGCGTTGTCAGCTAGCTGTTTGCCTTGTCTGATAATGTGGCCTATCGAATTAGTGTCAAGACGAAAATGA
Protein
MDNGTKEEKNRIWDYAVCFGTVITFIAGIGHVNSFGLIYRDFMIHTQSTTKSLTTANGVFAIMLAIGGIILNIITKKLTLRQCGLIGSCIFSTGSFLTILISNTNHLPFTFGVLQGIGFGILVPVCYSTLNLLFTTKRTTVMSIIKSLQGIILMWYPQVIKQTLSVYGFRGTLLIIFGISLHTFPGMLLMKTENKDTGKRLRTAKNIEIETDKQIKLELLNNDEQKQQILSDNGTEYKTSKKNRFHFLEVLNLRCLKDPVYCNICVGQSFMNFSDLTFFILQPMLLFQYGYDKAQVATCITIGTGADVAGRLALAMISGATHINTRLLYYVATLLTLVVRLVLLQIHEFIWVAAITAVLGILRAWIHIASPLVISNHVTHEDFAGAYALFMLAAGVVNLTCSPFIGMIKDSYEDYVPAFYALSASCLPCLIMWPIELVSRRK

Summary

Similarity
Belongs to the cytochrome P450 family.
EMBL
NWSH01001768    PCG70198.1    ODYU01004743    SOQ44945.1    KQ459597    KPI95077.1    + More
KQ460226    KPJ16482.1    AGBW02009819    OWR49848.1    CH477295    EAT44425.1    KZ150104    PZC73457.1    JXUM01010240    KQ560302    KXJ83164.1    ADMH02001190    ETN63784.1    DS233409    EDS29793.1    GFDL01007537    JAV27508.1    SOQ44944.1    AGBW02004200    OWR55438.1    AXCN02001457    ATLV01026883    KE525420    KFB53478.1    AXCM01000202    GANO01003057    JAB56814.1    AAAB01008859    EAA08073.5    APCN01000295    NWSH01001018    PCG73092.1    ODYU01000236    SOQ34666.1    AE014298    ABW09455.2    CH954180    KQS30081.1    CH480823    EDW56139.1    KQ460761    KPJ12539.1    GFDF01009272    JAV04812.1    AJWK01022144    AJWK01022145    AJWK01022146    AJVK01060889    GFDG01001263    JAV17536.1    AAF48946.3    CH902650    EDV30075.2    KQ971338    EFA01508.1    BABH01000581    GFDF01009468    JAV04616.1    GEZM01012259    JAV93035.1    KK852511    KDR22318.1    OWR49849.1    GAMD01001307    JAB00284.1    JTDY01006442    KOB66012.1    KPI95075.1    NWSH01000106    PCG79492.1    CH984177    EDX16703.1    PZC73456.1    APGK01054138    APGK01054139    KB741247    ENN72030.1    ENN72028.1    KQ435878    KOX69908.1    PZC73455.1    KZ288347    PBC27540.1    KQ982446    KYQ56363.1    KQ980734    KYN13878.1    GEZM01036000    JAV83043.1    GEZM01035998    JAV83046.1   
Pfam
PF07690   MFS_1        + More
PF11718   CPSF73-100_C
PF07521   RMMBL
PF10996   Beta-Casp
PF00753   Lactamase_B
PF00067   p450
PF12400   STIMATE
PF00059   Lectin_C
Interpro
IPR020846   MFS_dom        + More
IPR036259   MFS_trans_sf       
IPR011701   MFS       
IPR011108   RMMBL       
IPR036866   RibonucZ/Hydroxyglut_hydro       
IPR022712   Beta_Casp       
IPR001279   Metallo-B-lactamas       
IPR021718   CPSF73-100_C       
IPR002403   Cyt_P450_E_grp-IV       
IPR017972   Cyt_P450_CS       
IPR001128   Cyt_P450       
IPR036396   Cyt_P450_sf       
IPR022127   STIMATE/YPL162C       
IPR016186   C-type_lectin-like/link_sf       
IPR001304   C-type_lectin-like       
IPR016187   CTDL_fold       
SUPFAM
SSF103473   SSF103473        + More
SSF56281   SSF56281       
SSF48264   SSF48264       
SSF56436   SSF56436       
Gene 3D

Ontologies

Topology

Length:
442
Number of predicted TMHs:
10
Exp number of AAs in TMHs:
225.14985
Exp number, first 60 AAs:
29.97335
Total prob of N-in:
0.99724
POSSIBLE N-term signal
sequence
inside
1  -  15
TMhelix
16  -  38
outside
39  -  52
TMhelix
53  -  75
inside
76  -  81
TMhelix
82  -  101
outside
102  -  110
TMhelix
111  -  133
inside
134  -  139
TMhelix
140  -  157
outside
158  -  166
TMhelix
167  -  189
inside
190  -  326
TMhelix
327  -  344
outside
345  -  348
TMhelix
349  -  371
inside
372  -  383
TMhelix
384  -  406
outside
407  -  415
TMhelix
416  -  438
inside
439  -  442
 
 

Population Genetic Test Statistics

Pi
226.714074
Theta
177.535462
Tajima's D
0.624108
CLR
0.176124
CSRT
0.556172191390431
Interpretation
Uncertain
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