SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02964
Pre Gene Modal
BGIBMGA003572
Annotation
PREDICTED:_monocarboxylate_transporter_9-like_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.939
 

Sequence

CDS
ATGAGTGTGGTTAAAGAAGAGTGTTGTGAAGAAGAGAAGTACGAATTAGTTCCTCCCGAAGGAGGCTGGGGCTACGTTGTCTGTGTGGGATTATCTGTAATTTTCATTGCTGGCACCGCGCATCAGCCTGTTTTTGGTTTTATATACAATGATTTTCTGGACGAACTTGGCGTCGGTACTGGCGCCGTTACAGTTGTATATGGAGTGTTTCAAGTCACATTAGCTATTGCCGGTTTTTCGGCGAACATAGCTTTGAAAAGTCTTTCATTAAGACAAGTCGGTCTTATAGGTGCCTTTATATACACACTAGCATCATTCCTAGCAATATTTGTAGTATCCACAACTCAGTTAATTGTCACAAACGGATTCCTACAGGGCCTCGGAATGGGTCTACTAATTCCGGTGTCGTATACTAGTTTTAACAGTTACTTTACAAAGAAAAAAGTGCTGTATTTGAGTCTGTGTAAGGCATCTATTGGATTGATAACGATGTTGTACCCGCTGTTTATAAAATTTACGATAACCCAATACGGGTTTAGAGGGACTCTAGCGATTATTTGTGCCATATCAGCTCACAGTATTTTCGGAGCTCTAGTCATGCATCCTGTACAATGGTATATGGTGAAGAAATTGAAAACGTGCGAAAAGATTGTCCTGATACCACCGACGCCGGCCATTGAGGCGGGAAAAGAAAAATTCCATTTCAATTCTAACACGACGGCATCCAAAGGAGCGGAAAACGCGAGATCAGTGGAAAACTTGTACGCAATCAAACGGACGGGGAGTCAAAAACCCACGGAATTGCTATTCGTTCCGAAATTAGCTGATTCCAGACGACTGAGTATACCGGTGGTTTTGATCCCAGGGGAAACGAAGGCTGATAGCAAATTTAATTCGAGCGATAATGTGTATTTAGAGAATTTGTATAAGGCAGCTTCGGTCTCCAGTTTGGGTAATTTCGGGAATATCGCAGCTGAACCAATGCCAGTTATCAAGAACAAGGAAGGAAAGTGGCAAACGATAATGGAATACTTGGATCTGACTTTACTCAAAGATTTGGTTTACGACAATATCATTGTCGGAATGGCTTTGACATTTTTCGCTGATCTAACTTTCTTCACTTTGGAGCCTTTATTCTTGGATAAAGTCAATTTGAATCGGAGCCAAATTGCTAACATAATAGCTTTAGGCGGTGCTACGGACATGTGCGCCAGATTGTTCCTGGGCGTGGCGGGACAGTTCTTCATTATGAATAGCCGGTATATGTTCTTCATAGGAGCCCTTTTTGCAGCCGCTTTTAGATTGGTTATGATACAATTCACAACATACCTACCTCTACTAATATTGACTGGTATACTCGGAGCCTTGAGGTCTTTGGTGCATATAGCGCAGCCTATAGTGATGGCTGAACACGTTCCCATAGAGCTGTACCCATCGGCTTATGGACTCTACATGTTACTCGCCGGAGCGATTAGTTTGAGTGTCGGACCCATGATAGGATTCATTCGGGACTTCACTGGTAGTTATGTGGTTGCTTTCGTTATGTTGGCTGTGTGTAATCTATGCTGCGTTGTTCCGTGGGCGATAGAGTTCATTTTTCGTTACAAAAAAGAAAGGAAACTCAGAAATACGGACGTGAGCTGA
Protein
MSVVKEECCEEEKYELVPPEGGWGYVVCVGLSVIFIAGTAHQPVFGFIYNDFLDELGVGTGAVTVVYGVFQVTLAIAGFSANIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTSFNSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAISAHSIFGALVMHPVQWYMVKKLKTCEKIVLIPPTPAIEAGKEKFHFNSNTTASKGAENARSVENLYAIKRTGSQKPTELLFVPKLADSRRLSIPVVLIPGETKADSKFNSSDNVYLENLYKAASVSSLGNFGNIAAEPMPVIKNKEGKWQTIMEYLDLTLLKDLVYDNIIVGMALTFFADLTFFTLEPLFLDKVNLNRSQIANIIALGGATDMCARLFLGVAGQFFIMNSRYMFFIGALFAAAFRLVMIQFTTYLPLLILTGILGALRSLVHIAQPIVMAEHVPIELYPSAYGLYMLLAGAISLSVGPMIGFIRDFTGSYVVAFVMLAVCNLCCVVPWAIEFIFRYKKERKLRNTDVS

Summary

Similarity
Belongs to the cytochrome P450 family.
EMBL
NWSH01001768    PCG70196.1    KQ459597    KPI95076.1    ODYU01004743    SOQ44944.1    + More
KZ150104    PZC73457.1    DS233409    EDS29793.1    ADMH02001190    ETN63784.1    CH477295    EAT44425.1    JXUM01010240    KQ560302    KXJ83164.1    GFDL01007537    JAV27508.1    AXCM01000202    AAAB01008859    EAA08073.5    ATLV01026883    KE525420    KFB53478.1    APCN01000295    AJVK01060889    AXCN02001457    CP012528    ALC48709.1    CH916370    EDV99910.1    GFDF01009272    JAV04812.1    JXJN01009134    GDHF01008606    JAI43708.1    CH940651    EDW65806.2    CH902650    EDV30075.2    GAKP01006008    JAC52944.1    GFDG01001263    JAV17536.1    GAMC01005833    JAC00723.1    CH954180    KQS30081.1    CH933814    EDW05625.1    AE014298    ABW09455.2    GBXI01016687    JAC97604.1    CM000162    EDX02150.2    CH964239    EDW82900.1    CH480823    EDW56139.1    CH379064    EAL32064.2    OUUW01000015    SPP88661.1    GFDG01002962    JAV15837.1    NWSH01001018    PCG73092.1    CH479192    EDW26426.1    AAF48946.3    CCAG010021887    PYGN01000741    PSN41452.1    AJWK01022144    AJWK01022145    AJWK01022146    GFDF01009468    JAV04616.1    AGBW02004200    OWR55438.1    PSN41453.1    SOQ44945.1    GAMD01001307    JAB00284.1    KQ414663    KOC65428.1    KQ435878    KOX69909.1    GEZM01012259    JAV93035.1    QOIP01000010    RLU18112.1    KQ761046    OAD58324.1    LJIG01022462    KRT80450.1    NNAY01000453    OXU28289.1    AGBW02009819    OWR49848.1    GEDC01030051    JAS07247.1    KQ434946    KZC12317.1    KQ971338    EFA01508.1    NWSH01000106    PCG79492.1    GL448096    EFN85372.1    ADTU01010093    EFA02707.1    GEZM01043968    GEZM01043967    GEZM01043966    JAV78624.1    KPI95075.1    GBXI01012470    GBXI01009867    GBXI01005049    GBXI01001190    JAD01822.1    JAD04425.1    JAD09243.1    JAD13102.1    KA647669    AFP62298.1    GFDL01001303    JAV33742.1    GFDL01001222    JAV33823.1    PSN41451.1    PZC73456.1    KK856674    PTY26239.1    CH984177    EDX16703.1    KB632374    ERL93798.1   
Pfam
PF07690   MFS_1        + More
PF00067   p450
PF11718   CPSF73-100_C
PF07521   RMMBL
PF10996   Beta-Casp
PF00753   Lactamase_B
Interpro
IPR036259   MFS_trans_sf        + More
IPR011701   MFS       
IPR020846   MFS_dom       
IPR002403   Cyt_P450_E_grp-IV       
IPR017972   Cyt_P450_CS       
IPR001128   Cyt_P450       
IPR036396   Cyt_P450_sf       
IPR011108   RMMBL       
IPR036866   RibonucZ/Hydroxyglut_hydro       
IPR022712   Beta_Casp       
IPR001279   Metallo-B-lactamas       
IPR021718   CPSF73-100_C       
SUPFAM
SSF103473   SSF103473        + More
SSF48264   SSF48264       
SSF56281   SSF56281       
Gene 3D

Ontologies

Topology

Length:
547
Number of predicted TMHs:
12
Exp number of AAs in TMHs:
255.90336
Exp number, first 60 AAs:
23.86175
Total prob of N-in:
0.99788
POSSIBLE N-term signal
sequence
inside
1  -  20
TMhelix
21  -  43
outside
44  -  57
TMhelix
58  -  80
inside
81  -  92
TMhelix
93  -  112
outside
113  -  121
TMhelix
122  -  144
inside
145  -  148
TMhelix
149  -  171
outside
172  -  180
TMhelix
181  -  203
inside
204  -  352
TMhelix
353  -  375
outside
376  -  389
TMhelix
390  -  409
inside
410  -  420
TMhelix
421  -  438
outside
439  -  442
TMhelix
443  -  460
inside
461  -  479
TMhelix
480  -  502
outside
503  -  506
TMhelix
507  -  529
inside
530  -  547
 
 

Population Genetic Test Statistics

Pi
211.858097
Theta
162.430811
Tajima's D
0.735883
CLR
0.522333
CSRT
0.590670466476676
Interpretation
Uncertain
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